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WAE39478.1
Arc-VirOP880252__WAE39478.1__LDLAKGPJ-00054__00054
Identity
- Accession:
- OP880252 ↗
- Protein ID:
- WAE39478.1 ↗
- Kingdom:
- archaea
Quality
92.5
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Nakonvirales›
Ekchuahviridae›
Kukulkanvirus›
Methanophagales_virus_GBV301
TaxID: 2999280
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-98
Domain cluster:
representative
CATH (9)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qvpC00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.63 | 55.0 | 4.08e-01 | 100.0% | 74.7% |
| 3fmcC01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.62 | 55.0 | 3.95e-01 | 100.0% | 79.0% |
| 4axvA00 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.60 | 52.0 | 3.98e-01 | 100.0% | 80.1% |
| 2epkX01 | 3.30.160.230 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › N-acetyl-beta-d-glucosaminidase | 0.58 | 38.0 | 4.12e-01 | 100.0% | 80.0% |
| 2greA01 | 3.40.630.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Zn peptidases | 0.58 | 50.0 | 3.89e-01 | 100.0% | 72.0% |
| 2e7zA04 | 2.40.40.20 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › | 0.58 | 46.0 | 3.92e-01 | 86.6% | 91.3% |
| 1t8sA02 | 3.40.50.1580 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleoside phosphorylase domain | 0.57 | 50.0 | 3.60e-01 | 100.0% | 83.4% |
| 7uqyB01 | 3.90.550.10 | Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A | 0.56 | 38.0 | 2.99e-01 | 70.1% | 91.1% |
| 1n10A01 | 2.40.40.10 | Mainly Beta › Beta Barrel › Barwin-like endoglucanases › RlpA-like domain | 0.55 | 41.0 | 3.94e-01 | 80.4% | 98.2% |
ECOD (35)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5023853 | 2011.1.1.10 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › FGase | 0.68 | 61.0 | 5.06e-01 | 100.0% | 97.1% |
| 3269477 | 2011.1.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases | 0.68 | 61.0 | 4.46e-01 | 100.0% | 87.6% |
| 5054746 | 2011.1.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases | 0.67 | 61.0 | 4.50e-01 | 100.0% | 84.8% |
| 5000976 | 2011.1.1.10 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › FGase | 0.67 | 60.0 | 4.59e-01 | 100.0% | 84.3% |
| 4997426 | 2011.1.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases | 0.67 | 60.0 | 4.68e-01 | 100.0% | 93.3% |
| 4971845 | 2011.1.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases | 0.67 | 60.0 | 4.91e-01 | 100.0% | 91.1% |
| 5082207 | 2011.4.1.1 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) › Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) › Peptidase_C15 | 0.65 | 58.0 | 4.68e-01 | 100.0% | 97.4% |
| 5032749 | 2011.4.1.1 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) › Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) › Peptidase_C15 | 0.65 | 58.0 | 4.56e-01 | 100.0% | 91.7% |
| 3845073 | 2011.4.1.1 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) › Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) › Peptidase_C15 | 0.64 | 57.0 | 4.51e-01 | 100.0% | 89.7% |
| 1176405 | 2011.1.1.18 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › AstE_AspA_cat | 0.62 | 55.0 | 3.96e-01 | 100.0% | 79.5% |
| 4968794 | 2011.2.1.6 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › tRNA_deacylase | 0.61 | 54.0 | 4.43e-01 | 100.0% | 94.1% |
| 5068841 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.61 | 54.0 | 4.09e-01 | 100.0% | 80.0% |
| 5037366 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.60 | 53.0 | 4.14e-01 | 100.0% | 84.9% |
| 3695158 | 2011.1.1.0 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases | 0.60 | 53.0 | 4.17e-01 | 100.0% | 71.0% |
| 5016345 | 2011.2.1.7 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Peptidyl-tRNA hydrolase-like › Peptidyl-tRNA hydrolase-like › PAC2 | 0.60 | 51.0 | 3.95e-01 | 97.9% | 76.6% |
| 5061805 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.59 | 42.0 | 4.05e-01 | 94.8% | 65.5% |
| 3613887 | 2011.1.1.17 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › DUF2817 | 0.58 | 51.0 | 3.45e-01 | 100.0% | 76.9% |
| 4951750 | 2011.1.1.8 ↗ | a/b three-layered sandwiches › Phosphorylase/hydrolase-like › Zn-dependent exopeptidases › Zn-dependent exopeptidases › Peptidase_M28 | 0.58 | 50.0 | 3.83e-01 | 100.0% | 66.7% |
| 3658648 | 2498.1.1.11 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M48,Peptidase_M48_N | 0.58 | 43.0 | 2.91e-01 | 96.9% | 20.5% |
| 4013373 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.57 | 50.0 | 3.91e-01 | 100.0% | 59.4% |
| 4518435 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.57 | 44.0 | 3.45e-01 | 82.5% | 81.0% |
| 5045002 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.56 | 44.0 | 4.55e-01 | 83.5% | 92.2% |
| 4052010 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.56 | 45.0 | 3.88e-01 | 86.6% | 81.9% |
| 3838705 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.55 | 37.0 | 4.25e-01 | 70.1% | 100.0% |
| 4102554 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.55 | 42.0 | 4.17e-01 | 82.5% | 98.1% |
| 4999638 | 1.1.2.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi › Molydop_binding | 0.53 | 40.0 | 3.87e-01 | 81.4% | 98.3% |
| 3285042 | 315.3.1.1 ↗ | a+b two layers › Tautomerase/MIF-like › Vesiculogenesis and immune response regulator C-terminal domain › Vesiculogenesis and immune response regulator C-terminal domain › LytR_C | 0.53 | 43.0 | 4.33e-01 | 96.9% | 92.6% |
| 4048983 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.53 | 39.0 | 3.86e-01 | 79.4% | 90.5% |
| 4519852 | 315.3.1.1 ↗ | a+b two layers › Tautomerase/MIF-like › Vesiculogenesis and immune response regulator C-terminal domain › Vesiculogenesis and immune response regulator C-terminal domain › LytR_C | 0.52 | 42.0 | 4.32e-01 | 93.8% | 97.8% |
| 3715385 | 2498.1.1.14 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M8 | 0.52 | 46.0 | 3.91e-01 | 100.0% | 92.7% |
| 5051737 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.52 | 43.0 | 3.41e-01 | 91.8% | 45.4% |
| 3951005 | 315.3.1.1 ↗ | a+b two layers › Tautomerase/MIF-like › Vesiculogenesis and immune response regulator C-terminal domain › Vesiculogenesis and immune response regulator C-terminal domain › LytR_C | 0.52 | 41.0 | 4.23e-01 | 96.9% | 93.6% |
| 3472580 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.51 | 45.0 | 3.69e-01 | 100.0% | 94.7% |
| 4943991 | 1.1.2.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › double psi | 0.51 | 41.0 | 3.88e-01 | 88.7% | 97.5% |
| 4974758 | 2008.1.1.51 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › McrBC | 0.50 | 42.0 | 3.71e-01 | 95.9% | 88.4% |