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WAE39664.1
Arc-VirOP880254__WAE39664.1__NNKAGPMP-00028__00028
Identity
- Accession:
- OP880254 ↗
- Protein ID:
- WAE39664.1 ↗
- Kingdom:
- archaea
Quality
84.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 35-114
Domain cluster:
representative
CATH (15)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2o7gA00 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.66 | 51.0 | 5.00e-01 | 96.2% | 76.1% |
| 1q5nA03 | 1.10.40.30 | Mainly Alpha › Orthogonal Bundle › Ribonucleotide Reductase Protein R1; domain 1 › Fumarase/aspartase (C-terminal domain) | 0.66 | 42.0 | 4.20e-01 | 85.0% | 63.0% |
| 1h3lB00 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.64 | 48.0 | 4.92e-01 | 87.5% | 82.1% |
| 7wu8B01 | 1.20.1160.20 | Mainly Alpha › Up-down Bundle › Paired amphipathic helix 2 (pah2 repeat) › | 0.62 | 38.0 | 3.91e-01 | 86.3% | 62.0% |
| 3djbA01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.61 | 43.0 | 4.09e-01 | 83.7% | 61.5% |
| 2p11A02 | 1.10.286.50 | Mainly Alpha › Orthogonal Bundle › GTP Cyclohydrolase I; Chain A, domain 1 › | 0.60 | 40.0 | 4.19e-01 | 90.0% | 73.0% |
| 3gfvB01 | 3.40.50.1980 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain | 0.60 | 39.0 | 3.04e-01 | 77.5% | 29.7% |
| 2w4sA00 | 1.10.10.1440 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › PHAX RNA-binding domain | 0.58 | 44.0 | 4.31e-01 | 87.5% | 76.7% |
| 4cfsA02 | 1.10.210.20 | Mainly Alpha › Orthogonal Bundle › Uteroglobin › | 0.57 | 34.0 | 3.59e-01 | 70.0% | 65.7% |
| 3tf8B00 | 3.90.1520.10 | Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain | 0.57 | 41.0 | 3.16e-01 | 85.0% | 33.2% |
| 3u9jA00 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.57 | 40.0 | 3.31e-01 | 75.0% | 93.0% |
| 2hjmA01 | 1.20.120.460 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › protein pf1176 like | 0.56 | 40.0 | 3.96e-01 | 88.7% | 70.9% |
| 2qebA00 | 1.10.238.20 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain | 0.55 | 39.0 | 3.24e-01 | 85.0% | 40.7% |
| 4is7A01 | 1.10.150.50 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1 | 0.54 | 33.0 | 3.52e-01 | 93.8% | 70.6% |
| 3zwbA01 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.53 | 45.0 | 3.16e-01 | 97.5% | 70.3% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3572904 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.71 | 53.0 | 5.31e-01 | 97.5% | 77.5% |
| 4946451 | 102.1.1.182 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like › Rad51 | 0.68 | 35.0 | 3.70e-01 | 76.2% | 54.3% |
| 3718114 | 524.1.1.0 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p | 0.64 | 56.0 | 4.58e-01 | 100.0% | 66.0% |
| 3940184 | 142.1.1.28 ↗ | alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors › RIIa | 0.63 | 49.0 | 4.87e-01 | 96.2% | 80.0% |
| 4026102 | 592.1.1.1 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain › PWI | 0.63 | 41.0 | 4.22e-01 | 88.7% | 70.7% |
| 3963955 | 6056.1.1.2 ↗ | alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N | 0.61 | 45.0 | 4.89e-01 | 92.5% | 96.9% |
| 3616674 | 633.12.1.0 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like | 0.59 | 38.0 | 3.83e-01 | 83.7% | 65.0% |
| 4306906 | 6056.1.1.2 ↗ | alpha arrays › SP1917-like › SP1917-like › SP1917-like › PrmC_N | 0.59 | 47.0 | 4.96e-01 | 97.5% | 100.0% |
| 3428082 | 509.1.1.0 ↗ | alpha bundles › PAH2 domain › PAH2 domain › PAH2 domain | 0.58 | 40.0 | 4.12e-01 | 87.5% | 76.0% |
| 4942761 | 4009.1.1.0 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins | 0.57 | 47.0 | 4.66e-01 | 91.3% | 98.8% |
| 5078022 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.57 | 41.0 | 4.12e-01 | 88.7% | 76.2% |
| 1144720 | 633.20.1.1 ↗ | alpha bundles › Bromodomain-like › Hypothetical protein PF1176 › Hypothetical protein PF1176 › DUF3216 | 0.56 | 40.0 | 3.94e-01 | 87.5% | 70.6% |
| 4995419 | 592.2.1.0 ↗ | alpha arrays › PWI domain-like › YugE-like › YugE-like | 0.56 | 41.0 | 4.09e-01 | 88.7% | 74.1% |
| 3554793 | 592.1.1.0 ↗ | alpha arrays › PWI domain-like › PWI domain › PWI domain | 0.53 | 35.0 | 3.61e-01 | 88.7% | 73.3% |
| 5042552 | 2004.1.1.76 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DUF87 | 0.51 | 40.0 | 2.61e-01 | 97.5% | 18.6% |