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OP882271.1__WAX22426.1__X__00081

Bact-Vir

OP882271.1__WAX22426.1__X__00081

Identity

Accession:
OP882271 ↗
Kingdom:
phage

Quality

67.8 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 15-172
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF21821.4 best Dit_like 62.7 5.20e-17 96.2% 89.9%
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4dn9B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.80 30.0 3.89e-01 74.7% 57.7%
2bbeA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.78 32.0 4.01e-01 91.1% 60.2%
3kg0A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.77 31.0 3.97e-01 75.3% 60.8%
4zosB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.75 31.0 3.93e-01 90.5% 61.9%
3d37B01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.74 36.0 3.50e-01 100.0% 42.0%
1q8bA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 30.0 3.85e-01 74.7% 64.5%
3gz7B00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.72 30.0 3.77e-01 89.2% 61.2%
4dpoB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.71 31.0 3.78e-01 89.2% 62.4%
4divV01 2.40.30.200 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.68 50.0 5.32e-01 100.0% 86.9%
2rjzA02 3.30.70.60 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S6/Translation elongation factor EF1B 0.67 36.0 4.48e-01 100.0% 83.8%
3e3pA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 30.0 4.14e-01 93.7% 89.7%
3eaaA00 2.30.110.20 Mainly Beta › Roll › Pnp Oxidase; Chain A › Hcp1-like 0.63 48.0 4.76e-01 100.0% 76.5%
2vxaA00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.61 27.0 3.95e-01 77.2% 95.5%
1sqeA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 25.0 3.09e-01 89.2% 57.4%
5fiiB00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.61 27.0 3.61e-01 89.2% 78.2%
4qnyA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 32.0 3.59e-01 96.2% 64.7%
3pg1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 33.0 3.67e-01 96.8% 64.3%
2cc6A00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.61 26.0 3.78e-01 76.6% 93.8%
2y3uA02 3.30.980.50 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › 0.61 36.0 4.21e-01 100.0% 82.3%
2f7vA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 31.0 3.71e-01 74.1% 72.2%
4azsA02 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 30.0 4.03e-01 96.8% 92.6%
7d58G01 3.30.1490.120 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain 0.59 29.0 3.99e-01 76.6% 96.0%
3s1tA02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 26.0 3.41e-01 89.2% 75.0%
5uejA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.59 31.0 3.62e-01 75.3% 71.1%
3luyA03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 27.0 3.45e-01 93.0% 73.0%
3ct9A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 30.0 3.64e-01 75.3% 73.8%
6vh5C03 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.58 28.0 3.54e-01 94.3% 76.4%
1yc9A02 2.20.200.10 Mainly Beta › Single Sheet › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) 0.57 23.0 3.15e-01 98.1% 71.1%
3onrJ00 3.30.1660.10 Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin 0.57 25.0 3.51e-01 77.2% 89.7%
3pfoA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 32.0 3.59e-01 74.1% 69.5%
1go3E02 3.30.1490.120 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › RNA polymerase Rpb7-like, N-terminal domain 0.56 28.0 3.72e-01 76.6% 90.1%
3tx8A02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.55 29.0 3.41e-01 74.7% 71.1%
4j37A02 3.30.70.660 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Pseudouridine synthase I, catalytic domain, C-terminal subdomain 0.54 33.0 3.09e-01 90.5% 48.4%
1vm0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.54 29.0 3.70e-01 100.0% 89.2%
4hvzA02 3.30.70.2970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Protein of unknown function (DUF541), domain 2 0.54 29.0 3.37e-01 92.4% 72.3%
2gjvA00 3.30.2000.10 Alpha Beta › 2-Layer Sandwich › STM4215-like › Phage tail protein-like 0.53 38.0 4.09e-01 100.0% 86.0%
3n5fA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 27.0 3.08e-01 75.9% 65.8%
4z9eA00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.50 27.0 3.59e-01 99.4% 97.6%
ECOD (57)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3974464 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.90 41.0 6.12e-01 90.5% 94.7%
3980535 1.1.13.51 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_P2_GpU 0.80 59.0 6.41e-01 100.0% 88.1%
3969448 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.79 52.0 6.27e-01 99.4% 99.0%
3941539 1.1.13.40 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail 0.79 51.0 6.18e-01 98.7% 97.1%
3981654 1.1.13.40 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail 0.79 52.0 6.18e-01 99.4% 96.4%
3164699 1.1.13.33 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DNA_circ_N 0.78 53.0 6.15e-01 100.0% 94.8%
4059301 1.1.13.47 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like 0.77 51.0 6.09e-01 100.0% 95.5%
4929634 1.1.5.47 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.77 51.0 4.19e-01 100.0% 39.3%
4988102 1.1.13.47 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like 0.76 50.0 5.92e-01 100.0% 94.5%
5062396 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.73 61.0 6.44e-01 98.7% 96.4%
3943681 1.1.13.47 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like 0.71 61.0 6.34e-01 100.0% 94.0%
4032562 1.1.13.4 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.71 54.0 5.86e-01 100.0% 95.4%
4873215 1.1.13.11 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2001 0.70 50.0 5.34e-01 100.0% 82.9%
5011413 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.69 27.0 3.62e-01 91.8% 64.4%
5003885 1.1.5.24 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.68 50.0 5.25e-01 100.0% 83.4%
4033579 1.1.13.4 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.67 51.0 5.62e-01 100.0% 98.4%
2471641 1.1.5.24 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.67 50.0 5.13e-01 100.0% 81.2%
5004308 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.66 50.0 5.13e-01 100.0% 80.6%
4888732 1.1.13.4 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.66 48.0 4.90e-01 100.0% 76.9%
5004559 1.1.13.75 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CIS_tube 0.65 53.0 5.74e-01 100.0% 100.0%
4034209 1.1.13.4 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail 0.65 51.0 5.56e-01 100.0% 97.0%
3731186 872.1.1.0 a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like 0.65 30.0 4.41e-01 76.6% 98.6%
3687652 872.1.1.0 a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like 0.65 29.0 4.32e-01 76.6% 95.7%
3943316 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.65 52.0 5.23e-01 100.0% 82.5%
3580020 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.65 60.0 5.54e-01 100.0% 79.0%
4966226 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.64 27.0 3.28e-01 100.0% 56.4%
5007696 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.64 26.0 3.17e-01 100.0% 55.2%
5074003 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.64 28.0 3.24e-01 100.0% 54.8%
2471637 1.1.5.24 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.64 49.0 5.07e-01 100.0% 85.2%
2387782 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.63 49.0 4.84e-01 100.0% 75.6%
4995819 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.62 52.0 5.34e-01 100.0% 92.0%
5073338 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.62 28.0 3.24e-01 100.0% 57.4%
2832216 1.1.5.24 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_T4_gp19 0.61 50.0 5.07e-01 100.0% 87.6%
4984649 512.1.1.0 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.61 27.0 3.20e-01 100.0% 59.1%
4934997 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.61 27.0 3.10e-01 100.0% 53.3%
3964955 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.60 51.0 5.13e-01 100.0% 88.1%
70450 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.59 27.0 3.04e-01 100.0% 52.8%
4980780 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.59 26.0 3.05e-01 100.0% 56.4%
3602459 304.25.1.1 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain › M20_dimer 0.59 31.0 3.57e-01 75.3% 68.7%
3513366 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.58 54.0 5.23e-01 100.0% 90.3%
4956107 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.58 28.0 3.22e-01 100.0% 60.0%
3502370 1.1.5.47 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 0.58 47.0 4.74e-01 100.0% 84.4%
4994607 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.58 27.0 3.09e-01 100.0% 58.3%
5064236 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.57 26.0 3.05e-01 100.0% 59.1%
5059745 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.56 27.0 3.09e-01 100.0% 59.2%
4994610 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.56 24.0 2.80e-01 100.0% 52.2%
5004177 304.124.1.3 a+b two layers › Alpha-beta plaits › Phage tail protein-like › Phage tail protein-like › DUF3168 0.55 41.0 4.55e-01 100.0% 96.0%
4923979 304.102.1.5 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,DKCLD,TruB_C_2 0.55 33.0 3.13e-01 93.7% 48.7%
5076771 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.54 26.0 3.08e-01 100.0% 63.6%
4989300 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.54 27.0 2.97e-01 100.0% 57.6%
5075688 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.54 26.0 2.69e-01 100.0% 46.2%
4996950 304.8.1.2 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › ACT 0.52 30.0 3.35e-01 94.3% 69.5%
5079051 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.52 25.0 2.87e-01 100.0% 57.5%
4944562 512.1.1.5 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_3rd 0.52 24.0 2.83e-01 100.0% 59.1%
4972329 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.51 26.0 2.85e-01 100.0% 56.8%
4117439 512.1.1.2 a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › PmbA_TldD_2nd 0.51 25.0 2.97e-01 100.0% 66.7%
3465961 304.102.1.6 a+b two layers › Alpha-beta plaits › Pseudouridine synthase › Pseudouridine synthase › TruB_N,TruB_C_2 0.51 35.0 3.17e-01 93.7% 50.5%