Back to structures

OP882271.1__WAX22429.1__X__00084

Bact-Vir

OP882271.1__WAX22429.1__X__00084

Identity

Accession:
OP882271 ↗
Kingdom:
phage

Quality

71.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-144
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF21822.4 best Phage_TAC_15 57.4 3.20e-15 94.2% 96.0%
CATH (6)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1s5jA04 1.10.287.690 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › B family DNA polymerase, finger domain 0.57 23.0 3.37e-01 97.8% 82.0%
2pjwH00 1.20.5.1940 Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.56 27.0 3.22e-01 82.7% 67.0%
3mw6B00 1.10.1710.10 Mainly Alpha › Orthogonal Bundle › Fertility Inhibition Protein O; Chain: A; Domain 1 › ProQ/FinO domain 0.54 25.0 2.98e-01 87.1% 61.7%
3egoA02 1.10.1040.10 Mainly Alpha › Orthogonal Bundle › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 › N-(1-d-carboxylethyl)-l-norvaline Dehydrogenase; domain 2 0.53 29.0 3.15e-01 82.7% 60.3%
2bduA02 1.10.150.340 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Pyrimidine 5'-nucleotidase (UMPH-1), N-terminal domain 0.52 28.0 3.53e-01 91.4% 94.6%
1gaxA05 1.10.287.380 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Valyl-tRNA synthetase, C-terminal domain 0.50 22.0 2.95e-01 95.7% 76.7%
ECOD (2)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4487944 605.1.1.131 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Val_tRNA-synt_C 0.65 23.0 3.36e-01 96.4% 67.7%
4373203 605.1.1.131 alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › Val_tRNA-synt_C 0.64 23.0 3.36e-01 96.4% 67.7%