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OP882271.1__WAX22436.1__X__00093

Bact-Vir

OP882271.1__WAX22436.1__X__00093

Identity

Accession:
OP882271 ↗
Kingdom:
phage

Quality

68.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Micathvirus› Pseudomonas_phage_MiCath

TaxID: 3003729

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 40-120
PDB
Domain cluster: rep: OK040790.1__UDL15888.1__SEA_PUMPERNICKEL_97__00097__D598-675
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2v31A01 2.40.30.180 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Ubiquitin-activating enzyme E1, FCCH domain 0.73 65.0 6.08e-01 100.0% 80.4%
1v0fB03 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.71 65.0 6.43e-01 100.0% 95.3%
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.67 50.0 4.83e-01 100.0% 71.1%
6tdyD01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.65 53.0 5.45e-01 98.8% 96.0%
4b3fX02 2.40.30.270 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.65 59.0 5.53e-01 100.0% 85.7%
3upuA03 2.30.30.780 Mainly Beta › Roll › SH3 type barrels. › 0.63 47.0 4.00e-01 79.0% 98.5%
1fx0B01 2.40.10.170 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.61 52.0 5.30e-01 100.0% 96.2%
3mp6A05 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 41.0 4.56e-01 96.3% 90.5%
3w1eA03 2.40.10.410 Mainly Beta › Beta Barrel › Thrombin, subunit H › FlgT, C-terminal domain 0.60 53.0 5.18e-01 98.8% 95.5%
1yloE02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.59 52.0 5.20e-01 98.8% 97.6%
2derA03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.59 44.0 4.33e-01 88.9% 74.7%
6ijfC01 3.90.1720.80 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › 0.57 40.0 3.90e-01 100.0% 65.6%
1b23P03 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.56 46.0 4.36e-01 88.9% 80.9%
2p1gA02 2.30.260.10 Mainly Beta › Roll › putative xylanase like fold › putative xylanase like domain 0.55 49.0 4.62e-01 100.0% 94.0%
1g7sA04 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.54 47.0 4.63e-01 100.0% 100.0%
1vw4M01 2.30.30.790 Mainly Beta › Roll › SH3 type barrels. › 0.54 45.0 3.88e-01 93.8% 63.6%
5h4cB00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.52 44.0 3.86e-01 100.0% 88.1%
1nrkA02 3.30.70.1400 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Aminomethyltransferase beta-barrel domains 0.51 39.0 3.83e-01 81.5% 83.9%
1whoA00 2.60.40.760 Mainly Beta › Sandwich › Immunoglobulin-like › Expansin, cellulose-binding-like domain 0.51 37.0 3.62e-01 100.0% 69.1%
1r77A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 38.0 3.62e-01 81.5% 100.0%
3gzkA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.50 38.0 3.89e-01 100.0% 87.3%
2vo8A00 2.60.40.680 Mainly Beta › Sandwich › Immunoglobulin-like › 0.50 43.0 3.72e-01 100.0% 80.7%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4028468 1.1.7.35 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH 0.75 66.0 5.99e-01 100.0% 73.3%
3594588 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.74 67.0 6.39e-01 100.0% 96.8%
3615570 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.74 67.0 5.95e-01 100.0% 96.5%
3488003 1.1.7.35 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › E1_FCCH 0.73 68.0 6.72e-01 100.0% 95.3%
1030933 1.1.7.29 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › End_beta_barrel 0.71 65.0 6.31e-01 100.0% 91.0%
4060133 1.1.7.11 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM 0.67 62.0 5.96e-01 100.0% 92.2%
3969204 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.67 54.0 5.58e-01 100.0% 93.3%
3370388 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.65 47.0 5.11e-01 77.8% 93.8%
4618103 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.65 45.0 5.01e-01 88.9% 96.7%
3679595 4.1.1.118 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_15 0.64 46.0 4.82e-01 77.8% 83.8%
3575535 1.1.7.113 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › AAA_11, AAA_12 0.63 56.0 3.50e-01 100.0% 19.4%
3407820 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.63 41.0 4.06e-01 100.0% 63.5%
4883586 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.63 52.0 5.11e-01 100.0% 84.9%
5055353 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 56.0 4.77e-01 100.0% 84.6%
4366483 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.62 53.0 5.27e-01 100.0% 90.6%
3247984 11.21.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Ig-like domain in tailspike protein › Ig-like domain in tailspike protein 0.62 52.0 5.30e-01 95.1% 100.0%
3622389 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 41.0 4.48e-01 100.0% 86.2%
3789503 1.1.7.24 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › FAD_binding_8 0.61 55.0 5.04e-01 100.0% 94.3%
3987900 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 46.0 4.46e-01 98.8% 73.3%
4398429 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.58 43.0 4.35e-01 88.9% 80.0%
2491349 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 50.0 3.94e-01 100.0% 85.1%
3718208 1.1.7.6 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Ala_racemase_C 0.57 49.0 4.10e-01 100.0% 75.7%
4229219 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.56 43.0 4.10e-01 88.9% 70.5%
4097656 1.1.8.5 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain › tRNA_Me_trans_C 0.56 42.0 4.07e-01 88.9% 70.5%
3480351 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 46.0 4.73e-01 98.8% 97.3%
3229302 10.33.1.0 ↗ beta sandwiches › jelly-roll › Jelly-roll domain in minor capsid protein › Jelly-roll domain in minor capsid protein 0.55 48.0 4.08e-01 100.0% 95.7%
3839083 4.1.1.13 ↗ beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.55 39.0 4.16e-01 93.8% 88.6%
3471801 220.1.1.1 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.52 39.0 3.36e-01 80.2% 65.2%
3259065 11.1.1.29 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG 0.52 41.0 4.12e-01 100.0% 87.5%
1222010 11.1.1.48 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CelD_N 0.50 38.0 3.86e-01 100.0% 85.2%
4498731 10.32.1.0 ↗ beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.50 42.0 3.66e-01 100.0% 97.9%