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OP894077.1__WAX22504.1__HS5_26__00026

Bact-Vir

OP894077.1__WAX22504.1__HS5_26__00026

Identity

Accession:
OP894077 ↗
Kingdom:
phage

Quality

90.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Aquingentivirus› Listeria_phage_HS5

TaxID: 3003559

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 1-31_47-87
PDB
Domain cluster: representative
D2 medium residues 32-46_88-179
PDB
Domain cluster: representative
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ex2A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.58 44.0 3.39e-01 80.4% 86.1%
4jpqA00 2.60.40.1190 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 41.0 3.24e-01 75.7% 83.6%
1foeC02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 46.0 4.04e-01 89.7% 93.2%
2kc8A00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.56 41.0 4.31e-01 79.4% 88.4%
1kz7C02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 44.0 4.06e-01 87.9% 82.5%
1ntyA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 43.0 4.15e-01 87.9% 89.5%
3dasA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.53 39.0 2.81e-01 78.5% 89.5%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 34.0 3.81e-01 79.4% 90.8%
3v39A01 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 41.0 3.26e-01 86.9% 95.4%
1fw3A00 2.40.230.10 Mainly Beta › Beta Barrel › Outer membrane phospholipase (ompla); Chain C › Phospholipase A1 0.51 35.0 2.76e-01 71.0% 89.2%
2oqbA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 35.0 3.54e-01 71.0% 87.0%
2z0qA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 39.0 3.68e-01 82.2% 93.0%
7csoA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 40.0 3.86e-01 86.9% 96.1%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5006481 243.1.1.125 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF763 0.59 40.0 3.51e-01 71.0% 77.1%
4993827 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.58 40.0 4.48e-01 79.4% 97.5%
3221121 5.1.4.32 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N 0.56 46.0 3.00e-01 89.7% 32.0%
3167877 5.1.4.32 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nucleoporin_N 0.55 46.0 2.92e-01 90.7% 29.4%
3178444 220.1.1.112 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_10 0.55 45.0 4.11e-01 87.9% 78.6%
3458523 5.1.8.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 0.53 36.0 3.59e-01 86.0% 65.2%
3941306 5.1.3.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Arylesterase 0.53 46.0 3.26e-01 97.2% 83.9%
3933016 5.1.2.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed 0.53 45.0 3.27e-01 92.5% 64.1%
3406401 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.53 43.0 3.84e-01 87.9% 75.3%
3928508 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.53 45.0 3.13e-01 93.5% 82.5%
3275712 220.1.1.12 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › Myosin_TH1 0.52 44.0 3.62e-01 92.5% 54.0%
3310438 5.1.4.145 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › TAF1C_beta-prop 0.52 42.0 2.81e-01 89.7% 43.3%
5069930 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.52 38.0 3.24e-01 75.7% 97.1%
3178078 220.1.1.70 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_5 0.52 41.0 3.61e-01 86.0% 84.2%
3722216 220.1.1.70 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_5 0.52 41.0 3.64e-01 85.0% 88.4%
3182463 220.1.1.154 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_EXO84 0.52 40.0 3.37e-01 85.0% 70.3%
3537696 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.51 42.0 3.78e-01 88.8% 72.0%
3628965 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.51 41.0 3.61e-01 87.9% 81.2%
3629780 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 42.0 2.95e-01 90.7% 35.9%
3529797 220.1.1.68 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_Tiam1 0.51 40.0 3.49e-01 85.0% 83.5%
3630412 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 41.0 2.80e-01 86.0% 88.3%
3923731 220.1.1.35 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › IQ_SEC7_PH 0.51 40.0 3.58e-01 86.9% 72.5%
3688114 5.1.4.100 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Med16_N 0.50 41.0 2.75e-01 91.6% 51.8%
3397097 5.1.5.68 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › RAB3GAP2_N 0.50 43.0 2.96e-01 97.2% 96.3%
3743248 220.1.1.70 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_5 0.50 42.0 3.60e-01 92.5% 89.1%