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OP917824.1__WAX22764.1__MAJJADAN_00002__00002

Bact-Vir

OP917824.1__WAX22764.1__MAJJADAN_00002__00002

Identity

Accession:
OP917824 ↗
Kingdom:
phage

Quality

74.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_Amjad_SA

TaxID: 3003706

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 54-109
PDB
Domain cluster: representative
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gzcA00 1.25.40.90 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.58 42.0 3.17e-01 76.8% 88.6%
1u8xX01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.53 45.0 3.28e-01 98.2% 33.7%
6qu3A02 3.40.50.450 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.53 48.0 3.29e-01 100.0% 83.9%
2v4jC01 3.30.1420.10 Alpha Beta › 2-Layer Sandwich › Dissimilatory Siroheme-sulfite Reductase; Chain: A; domain 1 › DsrC protein, N-terminal domain 0.53 29.0 3.27e-01 76.8% 69.2%
1f02T00 4.10.820.10 Few Secondary Structures › Irregular › Translocated Intimin Receptor; Chain T › Translocated intimin receptor, central domain 0.52 44.0 4.24e-01 100.0% 86.4%
5b5lA00 3.40.50.1110 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › SGNH hydrolase 0.50 40.0 2.87e-01 96.4% 97.1%
3pbkA02 3.30.300.30 Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain 0.50 43.0 3.43e-01 96.4% 48.1%
8eb0A01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.50 36.0 3.25e-01 80.4% 96.5%
ECOD (11)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3317412 235.1.1.9 ↗ a+b complex topology › Lysozyme-like › Lysozyme-like › Lysozyme-like › SLT 0.66 53.0 3.78e-01 98.2% 64.5%
3390758 148.1.1.0 ↗ alpha arrays › Histone-like › Histone-related › Histone 0.62 52.0 4.30e-01 100.0% 52.0%
3717770 2484.1.1.2 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Actin 0.60 50.0 3.41e-01 100.0% 71.1%
3213800 5001.1.1.153 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Srd, 7TM_GPCR_Str 0.60 45.0 2.81e-01 83.9% 47.6%
3214589 5001.1.1.106 ↗ alpha bundles › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › Family A G protein-coupled receptor-like › 7TM_GPCR_Str 0.58 45.0 2.80e-01 83.9% 92.1%
4268987 304.11.1.4 ↗ a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › FAS_AT_central 0.58 49.0 4.04e-01 100.0% 57.3%
4942757 606.1.1.1 ↗ alpha complex topology › Nop N-terminal domain › Nop N-terminal domain › Nop N-terminal domain › Nop 0.57 46.0 3.79e-01 89.3% 81.0%
3325150 7512.1.1.0 ↗ a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase 0.55 47.0 3.10e-01 100.0% 35.0%
1122728 2002.1.1.13 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › Aldo_ket_red 0.53 41.0 2.67e-01 92.9% 30.6%
3781285 3568.1.1.1 ↗ extended segments › Splicing factor 1 N-terminal domain › Splicing factor 1 N-terminal domain › Splicing factor 1 N-terminal domain › SF1-HH 0.51 44.0 3.33e-01 98.2% 70.7%
4004154 212.1.1.6 ↗ a+b two layers › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal protein S5 domain 2-like › Ribosomal_S9 0.50 40.0 2.59e-01 87.5% 32.8%