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OP917824.1__WAX22800.1__MAJJADAN_00038__00038
Bact-VirOP917824.1__WAX22800.1__MAJJADAN_00038__00038
Identity
- Accession:
- OP917824 ↗
- Kingdom:
- phage
Quality
85.2
mean pLDDT
Cluster
View cluster (17 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 38-140
Domain cluster:
rep: MN604230.1__QGF21724.1__Sam112_gp20__00020__D22-108
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF18352.8 best | Gp138_N | 28.1 | 2.20e-06 | 99.0% | 96.9% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3qr8A01 | 2.40.50.230 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain | 0.88 | 56.0 | 6.20e-01 | 100.0% | 79.8% |
| 4hn7A00 | 2.40.50.650 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.75 | 41.0 | 4.50e-01 | 99.0% | 65.9% |
| 4egvA02 | 2.40.50.840 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.73 | 48.0 | 5.54e-01 | 100.0% | 92.0% |
| 3pqiA01 | 2.40.50.230 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain | 0.72 | 54.0 | 5.99e-01 | 99.0% | 97.6% |
| 4uhvA04 | 2.40.50.230 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Gp5 N-terminal domain | 0.72 | 55.0 | 5.57e-01 | 100.0% | 79.6% |
| 2rqxA00 | 2.40.50.650 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.70 | 39.0 | 4.33e-01 | 99.0% | 69.1% |
| 4gs3A00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.65 | 49.0 | 5.25e-01 | 100.0% | 91.1% |
| 3fhwA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.64 | 51.0 | 5.19e-01 | 100.0% | 89.9% |
| 1se8A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 51.0 | 5.04e-01 | 100.0% | 82.9% |
| 1v1qA00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 52.0 | 5.11e-01 | 100.0% | 85.5% |
| 7k98B01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.59 | 50.0 | 4.84e-01 | 100.0% | 81.6% |
| 3k7uC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.58 | 46.0 | 4.76e-01 | 100.0% | 89.8% |
| 4dkaC00 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 41.0 | 4.39e-01 | 100.0% | 95.3% |
| 4pmwA04 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.55 | 44.0 | 4.67e-01 | 98.1% | 98.9% |
| 3njaA02 | 2.10.70.100 | Mainly Beta › Ribbon › Complement Module; domain 1 › | 0.54 | 24.0 | 3.16e-01 | 77.7% | 82.6% |
| 5i4nA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.53 | 39.0 | 4.14e-01 | 100.0% | 89.1% |
| 4oelB00 | 2.40.50.170 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Cysteine proteinases. Chain C | 0.52 | 27.0 | 3.23e-01 | 100.0% | 73.9% |
| 3hx8A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 35.0 | 3.27e-01 | 93.2% | 55.5% |
ECOD (31)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3075885 | 2.1.1.96 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Gp138_N | 0.93 | 70.0 | 6.77e-01 | 80.6% | 71.2% |
| 3948035 | 2.1.1.96 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Gp138_N | 0.91 | 87.0 | 6.74e-01 | 100.0% | 51.5% |
| 3946740 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.90 | 58.0 | 6.19e-01 | 100.0% | 74.4% |
| 3980538 | 2.7.1.1 ↗ | beta barrels › OB-fold › Tail-associated lysozyme gp5-N › Tail-associated lysozyme gp5-N › Phage_base_V | 0.87 | 57.0 | 6.69e-01 | 100.0% | 92.0% |
| 3515504 | 2.1.1.12 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_S28e | 0.74 | 42.0 | 5.39e-01 | 94.2% | 98.3% |
| 185474 | 2.1.1.96 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Gp138_N | 0.72 | 55.0 | 5.93e-01 | 100.0% | 93.1% |
| 3931232 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.72 | 54.0 | 5.09e-01 | 100.0% | 64.8% |
| 3948011 | 3816.1.1.1 ↗ | beta barrels › Polymyxin B resistance protein › Polymyxin B resistance protein › Polymyxin B resistance protein › PmrD | 0.70 | 38.0 | 4.31e-01 | 99.0% | 69.2% |
| 4514268 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.70 | 41.0 | 4.35e-01 | 89.3% | 66.3% |
| 3931744 | 2.1.1.141 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › WCOB | 0.64 | 50.0 | 4.42e-01 | 100.0% | 57.3% |
| 3100772 | 2.1.1.2 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Ribosomal_L2 | 0.64 | 34.0 | 3.71e-01 | 98.1% | 61.6% |
| 3616990 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.60 | 46.0 | 4.58e-01 | 99.0% | 77.3% |
| 3997678 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 46.0 | 4.51e-01 | 99.0% | 77.3% |
| 3716709 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.59 | 52.0 | 4.87e-01 | 100.0% | 80.5% |
| 3612689 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.58 | 52.0 | 5.13e-01 | 100.0% | 96.4% |
| 4134937 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 45.0 | 4.54e-01 | 100.0% | 83.8% |
| 4343990 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.57 | 34.0 | 3.67e-01 | 100.0% | 70.6% |
| 3707760 | 2.1.1.225 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30388 | 0.57 | 52.0 | 4.92e-01 | 100.0% | 86.7% |
| 4056826 | 3816.1.1.1 ↗ | beta barrels › Polymyxin B resistance protein › Polymyxin B resistance protein › Polymyxin B resistance protein › PmrD | 0.56 | 37.0 | 4.11e-01 | 92.2% | 85.0% |
| 3701262 | 2.1.1.225 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30388 | 0.56 | 51.0 | 4.71e-01 | 100.0% | 85.4% |
| 3712376 | 2.1.1.225 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30388 | 0.55 | 48.0 | 4.61e-01 | 100.0% | 83.3% |
| 3599571 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 48.0 | 4.64e-01 | 100.0% | 87.0% |
| 5005284 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.54 | 43.0 | 4.47e-01 | 99.0% | 92.6% |
| 5009756 | 4972.1.1.1 ↗ | beta barrels › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › barrel domain in CV3147-like proteins › DUF917_C | 0.53 | 40.0 | 3.79e-01 | 79.6% | 87.2% |
| 4593266 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.52 | 33.0 | 3.69e-01 | 100.0% | 85.3% |
| 4980898 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.52 | 43.0 | 4.39e-01 | 87.4% | 98.0% |
| 3968190 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 43.0 | 4.50e-01 | 100.0% | 97.9% |
| 3705431 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 46.0 | 4.47e-01 | 100.0% | 93.9% |
| 3705073 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.51 | 35.0 | 3.55e-01 | 100.0% | 71.0% |
| 4955898 | 2.1.1.27 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RNA_pol_Rpb8 | 0.51 | 46.0 | 4.51e-01 | 100.0% | 100.0% |
| 3272235 | 304.112.1.0 ↗ | a+b two layers › Alpha-beta plaits › Argonaute, N-terminal domain › Argonaute, N-terminal domain | 0.50 | 33.0 | 2.91e-01 | 93.2% | 43.9% |