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OP918262.1__WAS28500.1__X__00054
Bact-VirOP918262.1__WAS28500.1__X__00054
Identity
- Accession:
- OP918262 ↗
- Kingdom:
- phage
Quality
68.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 192-256
Domain cluster:
representative
CATH (5)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7ob9B01 | 3.90.1110.10 | Alpha Beta › Alpha-Beta Complex › Dna-directed Rna Polymerase Ii 140kd Polypeptide; Chain: B; domain 3 › RNA polymerase Rpb2, domain 2 | 0.55 | 40.0 | 2.90e-01 | 78.5% | 59.9% |
| 2v7bA01 | 3.40.50.12780 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › ANL, N-terminal domain | 0.54 | 44.0 | 2.85e-01 | 98.5% | 76.8% |
| 1v1aA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 42.0 | 2.88e-01 | 100.0% | 90.0% |
| 3jr1A02 | 3.90.1200.10 | Alpha Beta › Alpha-Beta Complex › Aminoglycoside 3'-phosphotransferase; Chain: A, domain 2 › Aminoglycoside phosphotransferase (APH), C-terminal lobe | 0.50 | 41.0 | 3.01e-01 | 95.4% | 75.1% |
| 2ltuA00 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.50 | 32.0 | 3.26e-01 | 78.5% | 64.5% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3222360 | 103.1.1.21 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › AMPK_alpha_AID | 0.67 | 35.0 | 4.11e-01 | 80.0% | 73.3% |
| 4665947 | 103.5.1.0 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like | 0.60 | 43.0 | 4.52e-01 | 87.7% | 86.2% |
| 4319059 | 103.5.1.2 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › DmpG_comm | 0.59 | 42.0 | 4.31e-01 | 87.7% | 79.4% |
| 5040821 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.58 | 49.0 | 3.51e-01 | 98.5% | 96.6% |
| 4138987 | 3265.1.1.1 ↗ | alpha arrays › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › C-terminal helical domain in tRNA modifying enzyme GidA › GIDA_C_1st | 0.57 | 40.0 | 4.07e-01 | 86.2% | 75.4% |
| 3752995 | 331.4.1.28 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › AMPK_alpha_AID | 0.57 | 34.0 | 2.86e-01 | 78.5% | 32.2% |
| 3849281 | 103.1.1.21 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › AMPK_alpha_AID | 0.56 | 34.0 | 2.85e-01 | 78.5% | 32.2% |
| 4023971 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.56 | 46.0 | 3.39e-01 | 100.0% | 89.7% |
| 3797532 | 5081.1.1.0 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like | 0.55 | 44.0 | 3.32e-01 | 95.4% | 70.5% |
| 4947928 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.54 | 45.0 | 3.36e-01 | 100.0% | 99.5% |
| 5000805 | 327.11.2.3 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_6 | 0.54 | 45.0 | 4.20e-01 | 100.0% | 93.2% |
| 5058047 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.52 | 41.0 | 3.15e-01 | 95.4% | 73.2% |
| 3291154 | 7579.1.1.89 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › COesterase, BD-FAE | 0.52 | 42.0 | 2.54e-01 | 89.2% | 33.8% |
| 3958152 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.52 | 38.0 | 2.86e-01 | 80.0% | 47.4% |
| 3782021 | 5081.1.1.4 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 | 0.52 | 41.0 | 3.02e-01 | 93.8% | 71.9% |
| 4147304 | 103.5.1.2 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › DmpG_comm | 0.52 | 37.0 | 3.79e-01 | 90.8% | 85.0% |
| 3475796 | 5081.1.1.4 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › DUF1751 | 0.51 | 41.0 | 3.14e-01 | 100.0% | 78.5% |
| 1030234 | 103.1.1.21 ↗ | alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain › AMPK_alpha_AID | 0.50 | 32.0 | 3.26e-01 | 78.5% | 64.5% |
| 3742842 | 5081.1.1.1 ↗ | alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid | 0.50 | 41.0 | 3.02e-01 | 96.9% | 68.5% |