←Back to structures
OP918669.1__WBL53566.1__X__00016
Bact-VirOP918669.1__WBL53566.1__X__00016
Identity
- Accession:
- OP918669 ↗
- Kingdom:
- phage
Quality
87.1
mean pLDDT
Taxonomy
TaxID: 3003726
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-152
Domain cluster:
rep: OQ791408.1__WID10864.1__phiG2_21__00021__D3-153
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01832.26 best | Glucosaminidase | 132.1 | 2.60e-38 | 92.7% | 99.2% |
D2
high
residues 374-389_470-566
Domain cluster:
rep: IMGVR_UViG_3300009618_000029-3300009618-Ga0116127_100074338__D532-550_611-692
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06605.19 best | Prophage_tail | 44.8 | 1.90e-11 | 77.9% | 44.7% |
D3
high
residues 400-465
Domain cluster:
rep: IMGVR_UViG_2639762563_000001-2639762563-2640012021__D527-585
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF06605.19 best | Prophage_tail | 29.7 | 8.80e-07 | 100.0% | 35.4% |
D4
medium
residues 178-370
Domain cluster:
rep: GQ141189.1__ADD65705.1__BBP_0925__00007__D1-178
Pfam (2)
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3adyA00 | 3.55.50.60 | Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › DotD protein | 0.76 | 37.0 | 5.03e-01 | 77.7% | 88.2% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.67 | 30.0 | 4.23e-01 | 78.8% | 86.0% |
| 3kyfA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.67 | 33.0 | 4.18e-01 | 88.1% | 76.9% |
| 1k28D03 | 2.40.30.150 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Bacteriophage T4, Gp27, baseplate hub, domain 3 | 0.66 | 33.0 | 4.73e-01 | 83.4% | 100.0% |
| 4ic6C01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.65 | 31.0 | 4.00e-01 | 85.5% | 78.2% |
| 2gysA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 27.0 | 4.00e-01 | 77.7% | 87.2% |
| 5ejlA02 | 2.40.10.220 | Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains | 0.62 | 32.0 | 3.93e-01 | 89.1% | 76.6% |
| 6c98A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 25.0 | 3.45e-01 | 77.7% | 79.1% |
| 3u5wA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.58 | 32.0 | 3.89e-01 | 86.5% | 82.5% |
| 1c16A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 23.0 | 3.20e-01 | 77.7% | 72.2% |
| 2x8kA01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.56 | 32.0 | 4.13e-01 | 89.6% | 100.0% |
| 4ci2B02 | 2.30.130.40 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › LON domain-like | 0.56 | 33.0 | 4.05e-01 | 94.3% | 88.8% |
| 4qjvA01 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.54 | 21.0 | 2.95e-01 | 78.2% | 71.9% |
| 2ganA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.53 | 24.0 | 2.77e-01 | 85.0% | 53.5% |
ECOD (25)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4339226 | 3070.1.1.0 ↗ | a+b complex topology › N0 domain in phage tail proteins and secretins-like › N0 domain in phage tail proteins and secretins › N0 domain in phage tail proteins and secretins | 0.77 | 35.0 | 5.28e-01 | 74.6% | 100.0% |
| 4952364 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.77 | 30.0 | 4.56e-01 | 80.8% | 83.5% |
| 5056723 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.75 | 32.0 | 4.62e-01 | 92.2% | 83.2% |
| 5026244 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.74 | 31.0 | 4.58e-01 | 91.7% | 85.6% |
| 3256920 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.69 | 35.0 | 4.29e-01 | 93.3% | 74.4% |
| 4379249 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.68 | 35.0 | 4.28e-01 | 85.5% | 76.0% |
| 4036849 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.66 | 34.0 | 4.08e-01 | 86.0% | 72.2% |
| 1914511 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.66 | 33.0 | 4.05e-01 | 89.6% | 73.2% |
| 4094235 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.66 | 33.0 | 4.06e-01 | 86.0% | 74.4% |
| 4952629 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.64 | 34.0 | 4.63e-01 | 86.0% | 100.0% |
| 4344991 | 1.1.5.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › YwpF | 0.64 | 34.0 | 4.09e-01 | 85.5% | 76.2% |
| 4952909 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.64 | 31.0 | 4.05e-01 | 86.0% | 82.9% |
| 4217523 | 1.1.5.25 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ | 0.63 | 32.0 | 3.97e-01 | 85.5% | 75.2% |
| 4995816 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 32.0 | 4.53e-01 | 82.9% | 100.0% |
| 3943282 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.63 | 32.0 | 4.05e-01 | 89.1% | 79.2% |
| 3259730 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.61 | 32.0 | 4.21e-01 | 88.1% | 90.0% |
| 3256764 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.60 | 33.0 | 3.94e-01 | 92.2% | 78.5% |
| 4514734 | 1.1.13.42 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Tail_tube | 0.58 | 33.0 | 4.32e-01 | 86.0% | 98.2% |
| 4927424 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.57 | 28.0 | 3.39e-01 | 85.5% | 67.4% |
| 3981654 | 1.1.13.40 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_min_tail | 0.57 | 33.0 | 4.30e-01 | 82.4% | 100.0% |
| 5047765 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.57 | 33.0 | 3.99e-01 | 86.5% | 86.4% |
| 3250648 | 11.1.1.29 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › TIG | 0.57 | 24.0 | 3.27e-01 | 77.7% | 74.0% |
| 4965084 | 304.165.1.6 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein Ta1207 › Uncharacterized protein Ta1207 › HVO_2928_N | 0.52 | 31.0 | 3.31e-01 | 91.2% | 65.9% |
| 3198011 | 11.1.1.507 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF3712 | 0.52 | 25.0 | 2.80e-01 | 80.3% | 54.2% |
| 184986 | 1.1.13.4 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Sipho_tail | 0.51 | 33.0 | 4.01e-01 | 85.5% | 99.2% |