←Back to structures

OP946502.1__WBF78897.1__ADLP2_116__00116

Bact-Vir

OP946502.1__WBF78897.1__ADLP2_116__00116

Identity

Accession:
OP946502 ↗
Kingdom:
phage

Quality

75.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Lazarusvirus› Acinetobacter_phage_vB_AbaM_DLP2

TaxID: 3003715

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 5-92
PDB
Domain cluster: rep: OP946502.1__WBF78912.1__ADLP2_115__00115__D11-90
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6bogA02 2.30.30.930 Mainly Beta › Roll › SH3 type barrels. › 0.69 37.0 4.38e-01 95.5% 76.7%
3e19B01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.68 45.0 5.14e-01 96.6% 93.8%
2k5fA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.68 46.0 4.76e-01 96.6% 74.7%
2f5kA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.68 38.0 4.69e-01 97.7% 96.0%
6o5cA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.67 46.0 4.89e-01 97.7% 81.6%
3hrsA02 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.66 45.0 4.82e-01 97.7% 81.6%
2k4yA00 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.62 43.0 4.42e-01 95.5% 74.4%
2wacA01 2.40.50.90 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 44.0 3.96e-01 77.3% 94.4%
2k5iA01 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.61 46.0 4.71e-01 100.0% 84.5%
2q07A02 3.10.450.90 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › ArcTGT, C2 domain 0.60 29.0 3.31e-01 76.1% 60.0%
3buuB00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.57 42.0 3.19e-01 78.4% 90.9%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.55 36.0 3.87e-01 100.0% 78.9%
4z48A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.54 39.0 2.86e-01 76.1% 75.0%
2l3rA02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.54 35.0 3.76e-01 94.3% 79.5%
3al9A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 36.0 2.34e-01 71.6% 36.6%
7jw2A01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.52 38.0 2.91e-01 77.3% 48.6%
4qunA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.51 37.0 2.67e-01 76.1% 42.4%
3jqoA01 2.40.128.260 Mainly Beta › Beta Barrel › Lipocalin › Type IV secretion system, VirB10/TraB/TrbI 0.51 45.0 3.90e-01 100.0% 67.9%
2dmyA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.50 34.0 3.39e-01 96.6% 63.9%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5001481 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.69 46.0 4.94e-01 98.9% 80.0%
4030943 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.69 47.0 4.98e-01 97.7% 78.5%
3386779 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.67 47.0 5.04e-01 94.3% 85.1%
4033110 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.67 46.0 4.92e-01 96.6% 82.7%
5040422 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.67 46.0 4.98e-01 97.7% 84.0%
4984041 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.67 46.0 4.98e-01 97.7% 84.0%
4952214 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.67 45.0 4.85e-01 96.6% 81.3%
5055435 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.67 45.0 5.02e-01 97.7% 88.6%
3585214 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 39.0 3.81e-01 100.0% 52.0%
135285 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.66 45.0 4.77e-01 97.7% 79.5%
3839852 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.66 45.0 4.87e-01 96.6% 84.0%
5072519 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.66 45.0 4.86e-01 97.7% 84.0%
5079888 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.65 45.0 4.76e-01 94.3% 80.8%
5027286 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.65 45.0 4.60e-01 94.3% 74.1%
4952478 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.64 44.0 4.70e-01 97.7% 82.7%
3496040 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.62 42.0 3.47e-01 70.5% 61.3%
4975478 4.1.1.40 ↗ beta barrels › SH3 › SH3 › SH3 › FeoA 0.61 46.0 4.69e-01 94.3% 83.5%
5031305 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 37.0 4.20e-01 93.2% 84.6%
4986017 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.57 37.0 3.99e-01 100.0% 81.4%
3690549 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 33.0 3.57e-01 97.7% 68.6%
1548777 71.1.1.8 ↗ beta meanders › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › Lipoprotein localization factors LolAB › LolA_like 0.54 39.0 2.86e-01 76.1% 75.0%
5033277 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.53 38.0 4.33e-01 96.6% 100.0%
4878637 2.1.1.115 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PabTrmU54_TRAM_dom 0.52 39.0 4.00e-01 78.4% 85.5%
5080411 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.51 36.0 4.16e-01 96.6% 100.0%
4333172 2484.1.1.20 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › DNA_pol_A_exo1 0.51 38.0 2.94e-01 79.5% 42.5%