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OP947159.1__WBC28341.1__DPMD02_72__00073
Bact-VirOP947159.1__WBC28341.1__DPMD02_72__00073
Identity
- Accession:
- OP947159 ↗
- Kingdom:
- phage
Quality
75.3
mean pLDDT
Taxonomy
TaxID: 3003835
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-59
Domain cluster:
representative
CATH (37)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b43A01 | 1.10.10.2480 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.73 | 64.0 | 5.96e-01 | 100.0% | 79.4% |
| 3gp4B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.71 | 61.0 | 4.60e-01 | 100.0% | 40.8% |
| 3ucsA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.70 | 60.0 | 4.96e-01 | 100.0% | 53.5% |
| 5yc9B01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.70 | 55.0 | 4.60e-01 | 100.0% | 49.5% |
| 1tteA02 | 1.10.8.10 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain | 0.70 | 52.0 | 5.16e-01 | 92.7% | 78.9% |
| 1l8rA00 | 3.10.260.20 | Alpha Beta › Roll › Mlu1-box Binding Protein; DNA-binding Domain › Ski | 0.69 | 57.0 | 4.73e-01 | 94.5% | 73.3% |
| 1nvmA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.69 | 52.0 | 4.98e-01 | 98.2% | 71.9% |
| 2zhgA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.66 | 56.0 | 4.40e-01 | 100.0% | 43.8% |
| 1m62A00 | 1.20.58.120 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › BAG domain | 0.66 | 39.0 | 3.33e-01 | 78.2% | 36.8% |
| 1kblA05 | 1.20.80.30 | Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › | 0.65 | 56.0 | 4.85e-01 | 100.0% | 66.3% |
| 1r8eA02 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.65 | 58.0 | 5.26e-01 | 100.0% | 75.3% |
| 3hh0A01 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.64 | 55.0 | 5.06e-01 | 100.0% | 75.0% |
| 5i41B00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.64 | 54.0 | 5.15e-01 | 100.0% | 83.6% |
| 2ef8A00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.63 | 54.0 | 4.77e-01 | 100.0% | 69.0% |
| 1chuA03 | 1.20.58.100 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain | 0.63 | 39.0 | 3.34e-01 | 74.5% | 39.8% |
| 5d8cA00 | 1.10.1660.10 | Mainly Alpha › Orthogonal Bundle › Multidrug-efflux Transporter Regulator; Chain: A; Domain 2 › | 0.62 | 53.0 | 4.11e-01 | 100.0% | 42.9% |
| 1b25A02 | 1.10.569.10 | Mainly Alpha › Orthogonal Bundle › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A; domain 2 › Aldehyde Ferredoxin Oxidoreductase Protein, subunit A, domain 2 | 0.60 | 53.0 | 3.69e-01 | 100.0% | 32.0% |
| 3cexA00 | 1.20.120.450 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › dinb family like domain | 0.59 | 51.0 | 3.63e-01 | 98.2% | 90.0% |
| 4bjqA00 | 1.10.150.770 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.59 | 44.0 | 3.93e-01 | 80.0% | 71.8% |
| 1tf5A04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.59 | 51.0 | 3.60e-01 | 100.0% | 91.2% |
| 2gsvA00 | 6.10.140.40 | Special › Helix non-globular › Helix Hairpins › | 0.59 | 38.0 | 3.53e-01 | 72.7% | 53.7% |
| 3mq1A01 | 1.20.58.970 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 38.0 | 3.18e-01 | 74.5% | 39.1% |
| 3iieB03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.59 | 50.0 | 4.42e-01 | 100.0% | 74.1% |
| 2pgsA03 | 1.10.3410.10 | Mainly Alpha › Orthogonal Bundle › putative deoxyguanosinetriphosphate triphosphohydrolase fold › putative deoxyguanosinetriphosphate triphosphohydrolase like domain | 0.57 | 47.0 | 4.02e-01 | 96.4% | 95.9% |
| 3l1nA01 | 6.10.140.790 | Special › Helix non-globular › Helix Hairpins › | 0.57 | 38.0 | 4.00e-01 | 80.0% | 76.5% |
| 3kxaA02 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.56 | 44.0 | 4.23e-01 | 90.9% | 77.3% |
| 2vs0A00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.55 | 38.0 | 3.29e-01 | 70.9% | 63.4% |
| 3h5tA01 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.55 | 39.0 | 4.06e-01 | 76.4% | 100.0% |
| 7e84A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.55 | 38.0 | 3.01e-01 | 74.5% | 89.4% |
| 1zkeA00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.55 | 38.0 | 3.34e-01 | 72.7% | 63.0% |
| 2qkdA04 | 2.60.120.1040 | Mainly Beta › Sandwich › Jelly Rolls › ZPR1, A/B domain | 0.54 | 39.0 | 2.96e-01 | 76.4% | 51.2% |
| 2j3tD01 | 3.30.450.70 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 45.0 | 3.52e-01 | 100.0% | 85.1% |
| 1yg2A02 | 6.10.140.190 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 39.0 | 3.30e-01 | 78.2% | 78.9% |
| 6qumQ00 | 1.20.20.10 | Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C | 0.53 | 39.0 | 3.55e-01 | 80.0% | 87.8% |
| 1u7lA02 | 1.20.1460.10 | Mainly Alpha › Up-down Bundle › subunit c (vma5p) of the yeast v-atpase, domain 2 › subunit c (vma5p) of the yeast v-atpase, domain 2 | 0.51 | 39.0 | 2.71e-01 | 81.8% | 62.3% |
| 2pnqA00 | 3.60.40.10 | Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain | 0.51 | 44.0 | 2.67e-01 | 100.0% | 30.4% |
| 2gtaA00 | 1.10.287.1080 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like | 0.50 | 37.0 | 3.09e-01 | 80.0% | 59.8% |
ECOD (50)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5024287 | 103.5.1.11 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like › DUF2067 | 0.80 | 73.0 | 6.53e-01 | 100.0% | 81.3% |
| 3476358 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.79 | 67.0 | 6.51e-01 | 92.7% | 86.7% |
| 3664931 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.79 | 62.0 | 6.43e-01 | 92.7% | 94.0% |
| 3164063 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.79 | 71.0 | 6.56e-01 | 100.0% | 84.3% |
| 3325524 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.79 | 62.0 | 6.21e-01 | 92.7% | 85.5% |
| 4630854 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.78 | 61.0 | 6.36e-01 | 90.9% | 94.0% |
| 3366705 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.77 | 63.0 | 5.96e-01 | 92.7% | 75.4% |
| 4553393 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.77 | 62.0 | 6.22e-01 | 92.7% | 87.3% |
| 4460243 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.77 | 65.0 | 6.59e-01 | 98.2% | 94.5% |
| 3579672 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.77 | 62.0 | 6.25e-01 | 96.4% | 89.1% |
| 3622395 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.77 | 62.0 | 5.87e-01 | 96.4% | 75.4% |
| 282935 | 3601.1.1.1 ↗ | alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Ad_Cy_reg | 0.76 | 63.0 | 4.29e-01 | 100.0% | 26.0% |
| 4196673 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.75 | 66.0 | 6.69e-01 | 98.2% | 98.2% |
| 4633347 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.75 | 60.0 | 6.27e-01 | 92.7% | 98.0% |
| 3961212 | 101.1.9.104 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › Ad_Cy_reg | 0.74 | 62.0 | 5.38e-01 | 100.0% | 60.0% |
| 4028059 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.74 | 61.0 | 6.13e-01 | 98.2% | 90.9% |
| 4083584 | 3601.1.1.0 ↗ | alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain | 0.74 | 59.0 | 4.34e-01 | 100.0% | 32.7% |
| 4100614 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.73 | 61.0 | 6.14e-01 | 100.0% | 92.7% |
| 1098014 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.73 | 64.0 | 5.99e-01 | 100.0% | 80.6% |
| 4210562 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.73 | 63.0 | 6.17e-01 | 100.0% | 90.0% |
| 4519321 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.73 | 63.0 | 6.04e-01 | 100.0% | 83.1% |
| 2876157 | 101.1.9.105 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › PF30176 | 0.73 | 61.0 | 6.23e-01 | 100.0% | 98.1% |
| 3268224 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.72 | 57.0 | 5.73e-01 | 92.7% | 87.3% |
| 3284690 | 3601.1.1.0 ↗ | alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain | 0.72 | 59.0 | 4.37e-01 | 100.0% | 34.0% |
| 4561443 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.72 | 62.0 | 6.11e-01 | 100.0% | 90.0% |
| 4390858 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.72 | 58.0 | 6.03e-01 | 92.7% | 98.0% |
| 4330114 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.71 | 62.0 | 5.89e-01 | 100.0% | 83.1% |
| 4553544 | 3601.1.1.1 ↗ | alpha complex topology › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Class III adenylyl cyclases regulatory domain › Ad_Cy_reg | 0.71 | 58.0 | 3.99e-01 | 100.0% | 26.2% |
| 4315777 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.70 | 60.0 | 4.54e-01 | 100.0% | 38.6% |
| 4957076 | 101.1.9.134 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › DUF2067 | 0.69 | 53.0 | 5.20e-01 | 83.6% | 81.7% |
| 4640858 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.69 | 58.0 | 5.27e-01 | 98.2% | 69.3% |
| 4520820 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.69 | 59.0 | 5.34e-01 | 100.0% | 70.7% |
| 4064277 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.69 | 59.0 | 5.66e-01 | 100.0% | 83.1% |
| 3959614 | 101.1.9.0 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain | 0.69 | 56.0 | 4.83e-01 | 100.0% | 56.7% |
| 3390444 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.69 | 41.0 | 2.67e-01 | 90.9% | 15.5% |
| 3983963 | 101.1.9.41 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › ORF6N | 0.68 | 58.0 | 4.77e-01 | 98.2% | 77.1% |
| 4472807 | 101.1.9.8 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › IF2_N | 0.68 | 59.0 | 5.21e-01 | 100.0% | 67.5% |
| 3933112 | 206.1.1.8 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › PI3_PI4_kinase,FATC | 0.67 | 48.0 | 2.87e-01 | 80.0% | 10.6% |
| 3280706 | 101.1.9.17 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR_1 | 0.66 | 55.0 | 4.91e-01 | 100.0% | 65.0% |
| 3278826 | 101.1.9.82 ↗ | alpha arrays › HTH › HTH › Putative DNA-binding domain › MerR-DNA-bind, MerR_1 | 0.66 | 55.0 | 4.36e-01 | 100.0% | 44.2% |
| 3440522 | 5069.1.3.12 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits › DUF6490 | 0.59 | 39.0 | 3.20e-01 | 72.7% | 40.0% |
| 4951651 | 5042.1.1.1 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › CorA | 0.54 | 40.0 | 3.79e-01 | 80.0% | 67.6% |
| 5049763 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.54 | 45.0 | 3.49e-01 | 100.0% | 89.3% |
| 1557909 | 3678.1.1.1 ↗ | alpha arrays › Pilus-presented adhesin helical insertion domain › Pilus-presented adhesin helical insertion domain › Pilus-presented adhesin helical insertion domain › TED | 0.54 | 40.0 | 3.64e-01 | 87.3% | 82.1% |
| 3600606 | 310.2.1.0 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF | 0.54 | 37.0 | 2.61e-01 | 72.7% | 97.1% |
| 3698292 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.52 | 39.0 | 2.86e-01 | 80.0% | 62.1% |
| 3331225 | 5042.1.1.0 ↗ | extended segments › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region › Magnesium transport protein CorA, transmembrane region | 0.52 | 38.0 | 3.56e-01 | 80.0% | 65.7% |
| 4984959 | 3758.1.1.113 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › Rad50_zn_hook | 0.52 | 38.0 | 2.32e-01 | 78.2% | 14.8% |
| 5073974 | 605.1.1.1 ↗ | alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA | 0.51 | 36.0 | 3.26e-01 | 74.5% | 54.7% |
| 4001803 | 5050.1.1.0 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter | 0.51 | 42.0 | 2.85e-01 | 98.2% | 74.0% |