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OP947162.1__WBK39809.1__X__00003

Bact-Vir

OP947162.1__WBK39809.1__X__00003

Identity

Accession:
OP947162 ↗
Kingdom:
phage

Quality

87.6 mean pLDDT

Taxonomy

Rhodobacteraceae_phage_LS06-2018-MD06

TaxID: 3003839

Cluster

View cluster (7 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 36-120
PDB
Domain cluster: rep: SRR1747059_scaffold_22_prodigal-single.1__X__X__00132__D10-99
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4f7uG00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.78 53.0 5.90e-01 91.8% 88.2%
4c92A00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.75 58.0 5.02e-01 97.6% 53.8%
4m7dA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.75 49.0 5.52e-01 90.6% 87.7%
3k2zA02 2.10.109.10 Mainly Beta › Ribbon › Umud Fragment, subunit A › Umud Fragment, subunit A 0.75 46.0 4.11e-01 97.6% 44.5%
4f7uF00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.74 51.0 5.44e-01 91.8% 82.2%
4m78N00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.74 48.0 5.21e-01 92.9% 78.9%
4c92G00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.73 51.0 5.39e-01 92.9% 82.7%
6asoH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 44.0 4.49e-01 87.1% 62.7%
4emhA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 49.0 5.64e-01 89.4% 98.3%
3by7E00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.72 59.0 6.25e-01 100.0% 100.0%
5mkiH00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 46.0 4.95e-01 89.4% 78.9%
1d3bC00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.71 48.0 5.25e-01 91.8% 84.5%
3jb9F00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.69 48.0 4.90e-01 92.9% 74.4%
1b34B00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 48.0 5.17e-01 95.3% 85.1%
3pggA00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.68 49.0 5.11e-01 91.8% 82.1%
2mysA01 2.30.30.360 Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal 0.66 36.0 4.46e-01 89.4% 93.8%
4c92C00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.63 46.0 4.82e-01 90.6% 83.5%
1d3bB00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.62 50.0 5.13e-01 97.6% 90.1%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 39.0 4.32e-01 89.4% 100.0%
3pieC05 2.170.260.40 Mainly Beta › Beta Complex › paz domain › 0.54 43.0 3.44e-01 87.1% 67.1%
4innA00 2.40.128.520 Mainly Beta › Beta Barrel › Lipocalin › 0.52 46.0 3.91e-01 100.0% 87.7%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.52 33.0 3.30e-01 100.0% 59.8%
ECOD (47)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4983255 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.79 53.0 5.69e-01 91.8% 78.7%
2632533 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.79 56.0 6.13e-01 90.6% 89.9%
4575051 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.78 53.0 5.51e-01 92.9% 75.0%
4478186 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.77 41.0 5.36e-01 88.2% 97.8%
4015537 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 53.0 5.53e-01 92.9% 78.2%
3224038 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.76 54.0 5.70e-01 90.6% 84.0%
3483309 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.76 57.0 4.93e-01 96.5% 53.6%
4071971 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.75 46.0 3.81e-01 97.6% 35.9%
3626400 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.75 57.0 4.92e-01 97.6% 52.3%
3812580 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.75 57.0 5.00e-01 97.6% 55.3%
4990442 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.74 52.0 5.37e-01 92.9% 77.5%
5000810 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.73 53.0 5.30e-01 92.9% 75.3%
3785079 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.72 59.0 4.90e-01 98.8% 51.7%
4890477 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.72 43.0 5.32e-01 77.6% 100.0%
3915752 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.71 53.0 5.27e-01 92.9% 74.4%
3502962 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.71 54.0 5.59e-01 90.6% 86.3%
3706998 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.70 44.0 5.02e-01 92.9% 88.3%
4813032 4.1.1.328 ↗ beta barrels › SH3 › SH3 › SH3 › Sm_like 0.70 57.0 5.92e-01 100.0% 94.9%
3710540 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.70 51.0 5.38e-01 90.6% 86.7%
3189264 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.69 58.0 5.48e-01 100.0% 76.0%
3786067 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.69 52.0 5.35e-01 92.9% 83.7%
3598052 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.68 55.0 5.38e-01 100.0% 80.0%
3999729 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.68 48.0 4.75e-01 91.8% 69.7%
4030048 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.68 58.0 5.38e-01 100.0% 74.3%
3712189 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.68 53.0 5.20e-01 94.1% 77.8%
3486357 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.67 53.0 5.46e-01 95.3% 88.7%
3927391 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.66 51.0 4.84e-01 95.3% 68.9%
3482844 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.66 53.0 5.40e-01 97.6% 87.1%
3730294 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.64 49.0 5.04e-01 92.9% 85.0%
3249844 4.1.1.89 ↗ beta barrels › SH3 › SH3 › SH3 › SM-ATX 0.64 52.0 5.09e-01 92.9% 82.2%
3164898 4.11.1.1 ↗ beta barrels › SH3 › LexA/Signal peptidase › LexA/Signal peptidase › Peptidase_S24 0.62 37.0 3.62e-01 92.9% 52.6%
3597221 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.62 52.0 5.14e-01 97.6% 85.6%
3455165 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.62 49.0 4.78e-01 91.8% 76.8%
3168781 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.62 50.0 4.66e-01 94.1% 70.5%
3187241 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.61 53.0 4.89e-01 94.1% 77.3%
3168996 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.61 53.0 4.61e-01 92.9% 66.4%
3722424 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.61 53.0 5.04e-01 94.1% 84.0%
3600405 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 52.0 5.11e-01 98.8% 86.7%
4015057 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.60 51.0 4.85e-01 91.8% 84.0%
3788817 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.60 48.0 4.82e-01 90.6% 84.7%
3787684 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.59 51.0 4.74e-01 94.1% 75.2%
4017204 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.59 50.0 4.80e-01 94.1% 84.0%
3169596 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.58 50.0 4.38e-01 92.9% 70.4%
4019995 4.1.1.19 ↗ beta barrels › SH3 › SH3 › SH3 › LSM 0.56 48.0 4.43e-01 92.9% 76.4%
2803945 4.1.1.24 ↗ beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.56 44.0 3.73e-01 100.0% 51.1%
3796352 295.1.1.0 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain 0.55 32.0 3.60e-01 100.0% 73.8%
3230113 4.1.1.315 ↗ beta barrels › SH3 › SH3 › SH3 › SH3_12, XRN1_D1 0.53 42.0 2.77e-01 88.2% 32.4%