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OP991903.1__WBF04745.1__X__00071

Bact-Vir

OP991903.1__WBF04745.1__X__00071

Identity

Accession:
OP991903 ↗
Kingdom:
phage

Quality

84.0 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Chimalliviridae› Iapetusvirus› Erwinia_phage_vB_Ea277G

TaxID: 3016906

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 11-123
PDB
Domain cluster: rep: MZ577098.1__QZI94990.1__Melnitz3EXVC039M_36__00035__D49-200
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07087.17 best DUF1353 60.1 1.80e-16 77.0% 84.6%
CATH (12)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2yhsA01 1.20.120.140 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain 0.59 38.0 4.12e-01 91.2% 76.3%
3h20A04 1.10.1240.50 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.58 40.0 4.45e-01 81.4% 91.0%
2c42A03 3.40.920.10 Alpha Beta › 3-Layer(aba) Sandwich › Pyruvate-ferredoxin Oxidoreductase; domain 3 › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III 0.58 48.0 3.96e-01 91.2% 92.0%
1dlwA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.56 42.0 4.25e-01 79.6% 83.6%
2f46A00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.56 38.0 3.52e-01 92.9% 54.9%
1xriA00 3.90.190.10 Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily 0.54 42.0 3.81e-01 81.4% 95.4%
2gkmA00 1.10.490.10 Mainly Alpha › Orthogonal Bundle › Globin-like › Globins 0.53 43.0 4.14e-01 85.0% 81.1%
1r4wA01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.52 45.0 3.75e-01 96.5% 85.6%
1iqpA03 1.20.272.10 Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › 0.52 35.0 3.83e-01 77.0% 85.1%
7zviA01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.52 40.0 4.00e-01 85.8% 95.9%
2rfbA00 1.10.630.10 Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450 0.51 43.0 3.14e-01 94.7% 67.8%
4lmoA00 1.10.132.70 Mainly Alpha › Orthogonal Bundle › Topoisomerase I; Chain A, domain 4 › 0.51 42.0 3.34e-01 92.9% 57.0%
ECOD (23)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3285669 371.1.1.5 ↗ few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › DUF1353 0.91 76.0 6.71e-01 86.7% 66.5%
5060704 371.1.1.5 ↗ few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › DUF1353 0.85 64.0 6.55e-01 77.9% 100.0%
3940560 371.1.1.0 ↗ few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 0.82 59.0 6.11e-01 73.5% 92.4%
4218930 181.1.1.1 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.71 37.0 4.48e-01 92.0% 76.0%
3923692 371.1.1.0 ↗ few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 0.67 51.0 5.74e-01 87.6% 100.0%
4520559 592.2.1.1 ↗ alpha arrays › PWI domain-like › YugE-like › YugE-like › DUF1871 0.67 48.0 5.41e-01 78.8% 100.0%
3925909 371.1.1.0 ↗ few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 0.66 51.0 5.42e-01 82.3% 91.0%
3416261 371.1.1.0 ↗ few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 0.65 50.0 5.22e-01 97.3% 88.3%
5044421 592.2.1.0 ↗ alpha arrays › PWI domain-like › YugE-like › YugE-like 0.64 44.0 5.07e-01 88.5% 100.0%
3244588 371.1.1.0 ↗ few secondary structure elements › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 › Phospholipase A2, PLA2 0.64 49.0 5.44e-01 85.8% 100.0%
4348094 181.1.1.1 ↗ alpha bundles › Domain of the SRP/SRP receptor G proteins-like › Domain of the SRP/SRP receptor G-proteins › Domain of the SRP/SRP receptor G-proteins › SRP54_N 0.64 38.0 4.27e-01 89.4% 75.6%
5064030 182.1.3.0 ↗ alpha complex topology › Cryptochrome/photolyase FAD-binding domain-related › Cryptochrome/photolyase FAD-binding domain-related › PriX 0.63 43.0 4.64e-01 80.5% 82.1%
3831347 188.1.1.5 ↗ alpha arrays › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Nuclear receptor ligand-binding domain › Tcp11 0.59 50.0 4.34e-01 95.6% 93.3%
5045957 4156.1.1.0 ↗ alpha arrays › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like › Sec63 N-terminal subdomain-like 0.58 52.0 4.41e-01 97.3% 81.6%
3297644 101.1.1.148 ↗ alpha arrays › HTH › HTH › Three-helical HTH › EPL1 0.58 47.0 4.54e-01 89.4% 91.5%
4984330 3651.1.1.0 ↗ alpha bundles › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain › Translation initiation factor eIF-2B delta subunit N-terminal helical domain 0.58 39.0 4.30e-01 79.6% 86.7%
2084570 592.7.1.1 ↗ alpha arrays › PWI domain-like › GIPC1 GH2 domain › GIPC1 GH2 domain › GIPC1_GH2 0.57 42.0 4.50e-01 84.1% 93.5%
5048289 2004.1.3.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.57 51.0 4.31e-01 99.1% 93.2%
3411866 3919.1.1.0 ↗ alpha duplicates or obligate multimers › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 › N-terminal domain of COMMD9 0.56 42.0 4.12e-01 78.8% 100.0%
4930689 2004.1.3.1 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › Pyruvate-ferredoxin oxidoreductase, PFOR, domain III › POR 0.55 47.0 4.04e-01 96.5% 94.6%
3621308 106.1.1.0 ↗ alpha arrays › Globin-like › Globin-like › Globin-like 0.51 41.0 3.54e-01 85.0% 77.7%
3362789 4133.1.1.2 ↗ alpha arrays › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Emsy N terminal (ENT) domain-like › Tic110 0.51 41.0 4.35e-01 91.2% 99.0%
3492714 101.1.10.0 ↗ alpha arrays › HTH › HTH › Cyclin-like 0.51 43.0 3.79e-01 95.6% 89.4%