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OQ025560.1__WBY65465.1__FP3_000034__00034
Bact-VirOQ025560.1__WBY65465.1__FP3_000034__00034
Identity
- Accession:
- OQ025560 ↗
- Kingdom:
- phage
Quality
95.9
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Peduoviridae›
Irtavirus›
Pasteurella_phage_vB_PmuM_CFP3
TaxID: 3017169
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 23-92
Domain cluster:
rep: NC_049395.1__YP_009877575.1__HYP22_gp10__00010__D4-75
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF10963.15 best | Phage_TAC_10 | 85.7 | 2.80e-24 | 100.0% | 84.2% |
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3fgxA00 | 3.30.2220.10 | Alpha Beta › 2-Layer Sandwich › rbstp2171 › rbstp2171 | 0.86 | 79.0 | 7.02e-01 | 100.0% | 76.0% |
| 5ez1A01 | 3.10.50.40 | Alpha Beta › Roll › Chitinase A; domain 3 › | 0.55 | 44.0 | 3.99e-01 | 90.0% | 86.0% |
| 2lhrA00 | 1.20.58.1270 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 34.0 | 3.28e-01 | 75.7% | 56.4% |
| 3bt5A00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.53 | 38.0 | 3.09e-01 | 77.1% | 86.1% |
| 1lm3B00 | 1.20.120.10 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 | 0.52 | 39.0 | 3.50e-01 | 82.9% | 94.3% |
| 3hibA01 | 1.10.3380.10 | Mainly Alpha › Orthogonal Bundle › Sec63 N-terminal domain-like fold › Sec63 N-terminal domain-like domain | 0.51 | 41.0 | 3.57e-01 | 94.3% | 95.8% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.51 | 40.0 | 3.82e-01 | 85.7% | 78.8% |
| 4irfB00 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.50 | 38.0 | 3.14e-01 | 85.7% | 72.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 185252 | 3547.1.1.1 ↗ | a+b two layers › uncharacterised protein rbstp2171 › uncharacterised protein rbstp2171 › uncharacterised protein rbstp2171 › DUF6848 | 0.86 | 79.0 | 7.02e-01 | 100.0% | 76.0% |
| 3937617 | 170.1.1.0 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C | 0.59 | 44.0 | 4.18e-01 | 82.9% | 76.5% |
| 3821057 | 170.1.1.22 ↗ | alpha bundles › Retrovirus capsid protein › Retrovirus capsid protein-C › Retrovirus capsid protein-C › PF30901 | 0.54 | 38.0 | 3.81e-01 | 84.3% | 73.3% |
| 3705989 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.52 | 35.0 | 3.91e-01 | 91.4% | 100.0% |
| 3272259 | 7515.1.1.1 ↗ | a/b three-layered sandwiches › Alkaline phosphatase-like › Alkaline phosphatase-like › Alkaline phosphatase-like › Alk_phosphatase | 0.51 | 37.0 | 2.34e-01 | 78.6% | 30.9% |
| 3882215 | 4106.1.1.1 ↗ | few secondary structure elements › Zinc hairpin stack › Zinc hairpin stack › Zinc hairpin stack › DHHC | 0.51 | 41.0 | 3.76e-01 | 91.4% | 73.7% |