Back to structures

OQ032511.1__WAW11663.1__nACB1_080__00080

Bact-Vir

OQ032511.1__WAW11663.1__nACB1_080__00080

Identity

Accession:
OQ032511 ↗
Kingdom:
phage

Quality

78.3 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-17_33-88
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4fw1A02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.75 40.0 4.35e-01 100.0% 63.0%
2cudA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 39.0 3.73e-01 100.0% 45.6%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 43.0 4.17e-01 97.0% 55.4%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 40.0 3.88e-01 97.0% 53.4%
2fpeA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 37.0 3.88e-01 100.0% 58.1%
2eqkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.66 39.0 3.78e-01 100.0% 53.4%
1k1zA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 37.0 3.54e-01 100.0% 47.4%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 38.0 3.56e-01 100.0% 48.8%
4fssB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.63 36.0 3.75e-01 100.0% 59.0%
1x9mA01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.61 52.0 3.64e-01 98.5% 88.5%
7ue1B01 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.60 45.0 3.58e-01 81.8% 63.9%
2wfbA00 3.30.420.130 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Dinitrogenase iron-molybdenum cofactor biosynthesis domain 0.60 50.0 4.27e-01 100.0% 92.5%
3zuaA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.59 43.0 3.42e-01 75.8% 41.2%
1z1bA01 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.59 38.0 4.01e-01 93.9% 75.4%
4edjA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.53 44.0 3.82e-01 89.4% 75.5%
3pvlA05 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 37.0 3.60e-01 100.0% 67.1%
1qe0A02 3.40.50.800 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Anticodon-binding domain 0.52 41.0 3.77e-01 90.9% 94.5%
2vpjA00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.52 46.0 3.00e-01 100.0% 66.4%
3q6kA00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.51 43.0 2.72e-01 97.0% 31.1%
ECOD (19)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5060760 4.1.1.13 beta barrels › SH3 › SH3 › SH3 › MS_channel_2nd 0.70 41.0 4.20e-01 98.5% 60.0%
3261235 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.68 43.0 3.98e-01 97.0% 50.6%
5042478 2484.4.1.1 mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co 0.64 55.0 4.63e-01 100.0% 90.8%
5003943 2484.4.1.1 mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co 0.63 54.0 4.63e-01 97.0% 97.3%
5020876 2484.4.1.1 mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co 0.61 53.0 4.54e-01 98.5% 98.2%
4944932 2484.4.1.0 mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like 0.61 51.0 4.46e-01 98.5% 99.1%
4957208 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.61 45.0 3.41e-01 80.3% 61.2%
5004390 2484.4.1.1 mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co 0.60 51.0 4.35e-01 98.5% 88.7%
139373 2484.4.1.1 mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co 0.60 50.0 4.27e-01 100.0% 92.5%
3559800 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.60 51.0 3.73e-01 97.0% 46.3%
4945025 2484.4.1.0 mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like 0.59 50.0 4.35e-01 100.0% 96.4%
3923681 3257.1.1.1 a+b complex topology › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Phosphoinositide phosphatase SAC1 N-terminal domain › Syja_N 0.59 50.0 3.57e-01 93.9% 47.5%
4957862 2484.4.1.1 mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co 0.57 47.0 4.17e-01 100.0% 98.2%
4952128 2484.4.1.1 mixed a+b and a/b › Ribonuclease H-like › Nitrogenase accessory factor-like › Nitrogenase accessory factor-like › Nitro_FeMo-Co 0.57 47.0 4.12e-01 100.0% 99.1%
4677990 7502.1.1.1 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › HGTP_anticodon 0.56 46.0 4.01e-01 100.0% 85.2%
3733008 2484.1.1.114 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Med13_C 0.55 45.0 2.94e-01 93.9% 65.9%
5062107 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.52 42.0 2.77e-01 90.9% 94.3%
3682458 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.51 35.0 2.21e-01 87.9% 12.6%
4027429 4.1.1.41 beta barrels › SH3 › SH3 › SH3 › NOT2_3_5_C 0.51 35.0 2.54e-01 72.7% 33.8%