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OQ032512.1__WAW11765.1__nACB2_070__00070

Bact-Vir

OQ032512.1__WAW11765.1__nACB2_070__00070

Identity

Accession:
OQ032512 ↗
Kingdom:
phage

Quality

93.9 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Ackermannviridae› Acinetobacter_phage_nACB2

TaxID: 3015925

Cluster

View cluster (66 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-116
PDB
Domain cluster: rep: LacPavin_0818_WC55_scaffold_56344_prodigal-single.1__X__X__00048__D3-131
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00929.32 best RNase_T 75.4 1.10e-20 97.4% 62.2%
D2 high residues 124-175
PDB
Domain cluster: representative
CATH (30)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1j54A00 3.30.420.10 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H 0.88 72.0 4.86e-01 88.5% 26.4%
2yfqB01 1.10.8.1210 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › 0.74 45.0 4.54e-01 100.0% 61.5%
1icrA00 3.40.109.10 Alpha Beta › 3-Layer(aba) Sandwich › NADH Oxidase › NADH Oxidase 0.70 49.0 3.23e-01 75.0% 20.4%
1z0pA00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.69 47.0 4.22e-01 71.2% 60.3%
2y4tA02 1.10.287.110 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › DnaJ domain 0.69 47.0 4.76e-01 71.2% 71.2%
6a3kA00 1.20.120.10 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Cytochrome c/b562 0.68 57.0 4.33e-01 96.2% 87.6%
3gi7A00 1.20.1270.180 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › 0.65 58.0 4.63e-01 100.0% 75.7%
2fupA00 1.20.58.300 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › FlgN-like 0.65 45.0 3.38e-01 73.1% 31.5%
1xdxA01 3.30.1140.40 Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Tctex-1 0.64 50.0 4.08e-01 100.0% 45.0%
3hr0B01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.63 44.0 3.82e-01 73.1% 53.2%
2cqnA00 1.10.10.440 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › FF domain 0.63 48.0 4.28e-01 98.1% 57.1%
1b5lA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.63 54.0 3.93e-01 100.0% 91.4%
2i7uA00 6.10.250.1010 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.62 42.0 4.08e-01 73.1% 67.7%
1eteA00 1.20.1250.10 Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › 0.62 49.0 3.72e-01 100.0% 35.1%
3axjB02 1.20.58.200 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Translin; domain 2 0.62 47.0 4.00e-01 82.7% 80.0%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.60 51.0 4.54e-01 94.2% 66.2%
2kw6A00 6.10.140.1300 Special › Helix non-globular › Helix Hairpins › 0.58 46.0 4.31e-01 98.1% 67.7%
1nktA04 1.10.3060.10 Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA 0.58 53.0 3.59e-01 100.0% 88.7%
2e62A01 6.10.140.420 Special › Helix non-globular › Helix Hairpins › 0.58 47.0 4.74e-01 88.5% 90.4%
4okvE00 6.10.140.1890 Special › Helix non-globular › Helix Hairpins › 0.58 50.0 4.71e-01 98.1% 93.8%
2gf4A00 1.20.1270.110 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Uncharacterised protein family UPF0058 0.57 48.0 4.13e-01 100.0% 62.5%
1dmhA00 2.60.130.10 Mainly Beta › Sandwich › Protocatechuate 3,4-Dioxygenase, subunit A › Aromatic compound dioxygenase 0.56 43.0 2.70e-01 94.2% 14.6%
2q0oC00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.55 49.0 4.11e-01 96.2% 59.3%
2oznB01 1.20.1270.90 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › AF1782-like 0.55 49.0 4.26e-01 100.0% 82.5%
4q20A01 1.10.287.130 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain 0.54 45.0 3.84e-01 100.0% 58.5%
2b5dX01 3.20.110.10 Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain 0.54 44.0 2.60e-01 90.4% 25.0%
2w02B01 1.10.150.640 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle 0.53 44.0 3.99e-01 96.2% 89.2%
1w53A00 1.10.1240.30 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › KaiA/RbsU domain 0.52 42.0 3.62e-01 92.3% 95.2%
2ds2D01 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.51 35.0 3.50e-01 100.0% 64.9%
1sb7A02 3.30.2340.10 Alpha Beta › 2-Layer Sandwich › Pseudouridine synthase › TruD, insertion domain 0.51 40.0 3.08e-01 92.3% 77.9%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3353599 2484.1.1.45 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › CAF1 0.82 74.0 4.55e-01 100.0% 18.5%
3634546 632.15.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Staphylococcal complement inhibitor (SCIN) › Staphylococcal complement inhibitor (SCIN) 0.74 57.0 5.02e-01 82.7% 85.3%
3237264 3755.4.1.82 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Snf7 0.73 56.0 4.21e-01 84.6% 50.8%
4057506 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.72 53.0 4.54e-01 82.7% 75.6%
3395965 1134.1.1.0 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain 0.65 50.0 4.90e-01 96.2% 76.4%
3357448 192.6.1.0 ↗ alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain 0.65 45.0 4.61e-01 73.1% 78.0%
3366426 4120.1.1.0 ↗ few secondary structure elements › Tim10/DDP › Tim10/DDP › Tim10/DDP 0.62 49.0 4.89e-01 90.4% 92.7%
3248309 2485.1.1.17 ↗ a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › OST3_OST6 0.61 48.0 3.68e-01 98.1% 37.5%
4436335 3390.1.1.0 ↗ extended segments › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT › Photosystem II reaction center protein T, PsbT 0.61 44.0 4.71e-01 94.2% 91.1%
3996144 1134.1.1.0 ↗ alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain 0.60 42.0 4.32e-01 96.2% 78.0%
4375086 605.1.1.108 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › GrpE 0.59 47.0 4.60e-01 94.2% 80.0%
4015665 633.12.1.0 ↗ alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like 0.58 41.0 3.89e-01 80.8% 63.8%
3450050 7581.1.1.25 ↗ a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › FAE1_CUT1_RppA, ACP_syn_III_C 0.56 46.0 2.70e-01 94.2% 33.1%
1108191 604.17.1.1 ↗ alpha bundles › Spectrin repeat-like › MTH_863 C-terminal domain-like › MTH_863 C-terminal domain-like › DUF447_C 0.53 40.0 3.72e-01 82.7% 88.1%
314734 4982.1.1.2 ↗ alpha arrays › KaiA/RbsU domain-like › KaiA/RbsU domain › KaiA/RbsU domain › RsbU_N 0.52 41.0 3.53e-01 88.5% 96.5%
3287102 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.51 46.0 3.85e-01 100.0% 60.0%