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OQ055246.1__WEL95566.1__X__00072

Bact-Vir

OQ055246.1__WEL95566.1__X__00072

Identity

Accession:
OQ055246 ↗
Kingdom:
phage

Quality

78.3 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Xanthomonas_phage_vB_XooS_NR08

TaxID: 2953619

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 73-135
PDB
Domain cluster: rep: IMGVR_UViG_3300000568_000096-3300000568-Draft_1006303628__D10-62
D2 medium residues 1-58
PDB
Domain cluster: representative
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2xjyA01 2.10.110.10 Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein 0.58 39.0 3.88e-01 70.7% 100.0%
3x3bA00 1.20.1070.10 Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins 0.56 39.0 2.55e-01 72.4% 58.7%
3vpbE00 2.20.28.160 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › 0.53 37.0 3.75e-01 72.4% 94.6%
5fb0C01 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.53 37.0 3.67e-01 93.1% 72.1%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3478556 3877.1.1.5 ↗ alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › Lips 0.63 44.0 3.10e-01 74.1% 36.8%
5018523 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.62 46.0 4.34e-01 79.3% 68.6%
3273944 2003.1.2.18 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.58 40.0 2.36e-01 72.4% 63.0%
4816887 5054.1.1.2 ↗ alpha complex topology › Voltage-gated ion channels › Voltage-gated ion channels › Voltage-gated ion channels › Ion_trans 0.55 38.0 2.91e-01 72.4% 31.6%