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OQ055246.1__WEL95635.1__X__00141

Bact-Vir

OQ055246.1__WEL95635.1__X__00141

Identity

Accession:
OQ055246 ↗
Kingdom:
phage

Quality

69.7 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Xanthomonas_phage_vB_XooS_NR08

TaxID: 2953619

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-107
PDB
Domain cluster: rep: ON602723.1__UVX28986.1__A1p_00054__00054__D3-97
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13392.13 best HNH_3 30.9 2.30e-07 41.4% 76.1%
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1u3eM01 3.90.75.20 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › 0.75 67.0 6.22e-01 96.6% 80.2%
1a73A00 3.90.75.10 Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › Homing Intron 3 (I-ppo) Encoded Endonuclease; Chain A 0.62 55.0 4.49e-01 98.9% 69.8%
1e8pA00 3.90.1220.10 Alpha Beta › Alpha-Beta Complex › Endoglucanase; Chain: A › Cellulose docking domain, dockering 0.60 26.0 3.43e-01 96.6% 73.9%
2qj6A01 2.10.270.10 Mainly Beta › Ribbon › left handed beta-beta-3-solenoid › Cholin Binding 0.50 34.0 3.02e-01 70.1% 68.9%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3965202 378.1.1.19 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH_3 0.87 77.0 7.05e-01 94.3% 89.1%
3586841 378.1.1.7 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › NUMOD4,HNH_3 0.78 69.0 6.26e-01 96.6% 85.2%
3171587 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.54 48.0 3.09e-01 100.0% 29.4%
3611854 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.53 47.0 3.74e-01 100.0% 63.2%
3595891 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.53 47.0 3.63e-01 100.0% 60.0%
4493210 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.52 46.0 3.63e-01 100.0% 61.1%
4886706 632.7.1.1 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 0.51 45.0 3.59e-01 98.9% 63.3%
3739728 376.1.4.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Ariadne-1 protein homolog 0.50 26.0 3.01e-01 100.0% 70.9%
D2 high residues 136-236
PDB
Domain cluster: rep: DQ777876.1__ABK00203.1__X__00057__D34-113
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF13392.13 best HNH_3 27.5 2.50e-06 35.6% 71.7%