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OQ059336.1__WBF05298.1__X__00036

Bact-Vir

OQ059336.1__WBF05298.1__X__00036

Identity

Accession:
OQ059336 ↗
Kingdom:
phage

Quality

93.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Psychrobacter_phage_vB_PmaS_Y8A

TaxID: 3017068

Cluster

View cluster (14 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 22-110
PDB
Domain cluster: representative
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3fcgB00 2.60.40.3110 Mainly Beta › Sandwich › Immunoglobulin-like › Outer membrane usher protein 0.67 40.0 4.38e-01 84.3% 73.2%
1ti2B03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.65 43.0 4.48e-01 100.0% 72.6%
3tp4B02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.64 44.0 4.37e-01 85.4% 67.7%
3ua3A03 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.63 56.0 4.29e-01 100.0% 85.7%
4ecnA01 2.60.40.3540 Mainly Beta › Sandwich › Immunoglobulin-like › Domain of unknown function DUF4458 0.62 54.0 5.18e-01 98.9% 83.5%
7mjrA02 2.60.120.240 Mainly Beta › Sandwich › Jelly Rolls › Protective antigen, heptamerisation domain 0.62 48.0 3.78e-01 84.3% 79.4%
1bquA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 42.0 4.11e-01 96.6% 67.0%
7sf2A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 43.0 4.26e-01 84.3% 73.1%
3vmnA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 45.0 4.23e-01 85.4% 66.7%
5c71A02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 42.0 4.12e-01 85.4% 69.8%
4nx9A02 2.60.40.4390 Mainly Beta › Sandwich › Immunoglobulin-like › 0.58 42.0 3.81e-01 76.4% 76.9%
6fwvA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 42.0 4.21e-01 100.0% 75.6%
3v98B01 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.58 46.0 4.26e-01 100.0% 66.7%
1uc8A03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.57 48.0 4.73e-01 94.4% 84.0%
2xwxA03 2.60.40.2550 Mainly Beta › Sandwich › Immunoglobulin-like › 0.56 41.0 3.96e-01 84.3% 68.4%
3bgaA02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.56 44.0 4.12e-01 85.4% 69.4%
5dmxB02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.54 46.0 3.76e-01 91.0% 57.7%
3zsjA00 2.60.120.200 Mainly Beta › Sandwich › Jelly Rolls › 0.54 41.0 3.56e-01 82.0% 79.0%
3qvaA00 2.60.40.180 Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain 0.53 44.0 4.14e-01 98.9% 75.2%
2wfwA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 29.0 3.35e-01 98.9% 77.6%
4nreA01 2.60.60.20 Mainly Beta › Sandwich › Lipoxygenase-1 › PLAT/LH2 domain 0.52 46.0 4.17e-01 100.0% 72.5%
1t6eX02 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.52 45.0 3.61e-01 100.0% 75.5%
5h4cB00 2.60.120.40 Mainly Beta › Sandwich › Jelly Rolls › 0.52 37.0 3.23e-01 85.4% 48.9%
4bfeC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 3.60e-01 77.5% 75.5%
1mvpA00 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.51 45.0 4.24e-01 100.0% 87.5%
4pjeE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 39.0 3.70e-01 84.3% 68.5%
5lf5A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 32.0 3.35e-01 84.3% 67.5%
2ichA02 2.40.370.10 Mainly Beta › Beta Barrel › AttH-like fold › AttH-like domain 0.51 36.0 3.29e-01 100.0% 52.3%
1k0hA00 2.40.10.180 Mainly Beta › Beta Barrel › Thrombin, subunit H › Phage tail proteins 0.50 41.0 3.87e-01 100.0% 72.6%
ECOD (34)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5042577 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.71 47.0 5.02e-01 98.9% 80.0%
5068961 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.69 41.0 4.60e-01 79.8% 75.7%
3483331 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.69 46.0 4.98e-01 84.3% 81.3%
5061048 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.68 44.0 4.33e-01 85.4% 61.1%
3460166 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 57.0 5.26e-01 100.0% 98.3%
3385240 11.1.1.545 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Chromosome_seg 0.64 57.0 5.25e-01 100.0% 97.4%
3726357 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 46.0 4.59e-01 87.6% 71.6%
3604271 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.64 47.0 4.60e-01 85.4% 70.0%
3875481 11.1.1.2 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 0.63 42.0 4.26e-01 85.4% 67.8%
1031128 11.1.4.26 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › DUF4458 0.62 53.0 5.09e-01 97.8% 81.0%
3427385 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.62 41.0 4.43e-01 98.9% 81.3%
3221388 11.2.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain 0.62 50.0 4.55e-01 87.6% 83.3%
3419970 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.62 52.0 4.22e-01 100.0% 48.0%
5064714 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 48.0 4.23e-01 85.4% 58.5%
5023921 65.1.1.0 ↗ beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.61 30.0 3.73e-01 97.8% 76.4%
5034828 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.61 44.0 4.10e-01 92.1% 59.1%
4952076 1.10.1.1 ↗ beta barrels › cradle loop barrel › HI0933 barrel domain-like › HI0933 barrel domain-like › HI0933_like_1st 0.60 42.0 4.27e-01 95.5% 72.2%
3964215 897.2.1.1 ↗ a+b two layers › Acidic mitochondrial matrix protein p32-like › Protein E › Protein E › Adhesin_E 0.60 39.0 3.66e-01 98.9% 51.3%
5053293 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 45.0 3.95e-01 84.3% 53.1%
3807080 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.58 53.0 4.16e-01 100.0% 64.3%
3493885 10.10.1.1 ↗ beta sandwiches › jelly-roll › Lipase/lipooxygenase domain (PLAT/LH2 domain) › Lipase/lipooxygenase domain (PLAT/LH2 domain) › PLAT 0.58 46.0 3.97e-01 85.4% 85.7%
3965131 77.1.1.0 ↗ beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein 0.58 30.0 3.08e-01 95.5% 47.8%
5073930 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.57 38.0 4.01e-01 76.4% 76.2%
3881492 109.4.1.411 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TTC3_DZIP3_dom 0.57 41.0 2.79e-01 75.3% 22.9%
3964308 1.1.13.37 ↗ beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2163 0.56 47.0 4.24e-01 100.0% 93.3%
3217492 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 39.0 3.38e-01 74.2% 97.9%
3826852 11.1.1.37 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › E1_DerP2_DerF2 0.55 46.0 4.20e-01 98.9% 68.0%
3743741 220.1.1.86 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › ZGRF1-like_N 0.54 38.0 3.87e-01 88.8% 75.3%
3929899 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 39.0 3.56e-01 77.5% 79.2%
3509392 10.1.1.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases 0.53 40.0 3.30e-01 79.8% 65.0%
3267583 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.53 39.0 4.04e-01 98.9% 83.5%
3385762 4951.1.1.0 ↗ alpha arrays › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit › inserted helical subdomain in bacterial RNA-polymerase beta-prime subunit 0.52 39.0 4.12e-01 97.8% 87.5%
3894531 11.1.1.99 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.51 39.0 3.28e-01 85.4% 52.1%
5081216 10.4.1.0 ↗ beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.50 34.0 3.27e-01 80.9% 59.0%