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OQ059336.1__WBF05301.1__X__00039

Bact-Vir

OQ059336.1__WBF05301.1__X__00039

Identity

Accession:
OQ059336 ↗
Kingdom:
phage

Quality

93.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Psychrobacter_phage_vB_PmaS_Y8A

TaxID: 3017068

Cluster

View cluster (18 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-73
PDB
Domain cluster: rep: IMGVR_UViG_3300028602_002087-3300028602-Ga0265294_1000673614__D3-70
CATH (9)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3p54A02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.64 45.0 4.55e-01 87.3% 74.6%
1oygA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 48.0 2.97e-01 93.0% 83.6%
1obbA00 3.90.1820.10 Alpha Beta › Alpha-Beta Complex › LDH C-terminal domain-like › AglA-like glucosidase 0.54 42.0 2.62e-01 88.7% 82.8%
1yk3B00 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.53 43.0 3.26e-01 93.0% 62.7%
2x45A00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.53 46.0 3.72e-01 100.0% 70.1%
3qktD01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.52 44.0 2.92e-01 97.2% 45.6%
8d3mI01 3.90.320.10 Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › 0.51 40.0 3.02e-01 91.5% 51.2%
1f2uA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.51 42.0 3.39e-01 95.8% 66.4%
2ec1A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.51 40.0 3.46e-01 88.7% 79.7%
ECOD (12)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3682599 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.59 51.0 3.11e-01 100.0% 18.7%
4467467 65.1.1.0 ↗ beta sandwiches › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases › Composite domain of metallo-dependent hydrolases 0.56 36.0 4.00e-01 70.4% 85.5%
3664260 227.1.1.11 ↗ a+b two layers › DNA clamp › DNA clamp › DNA clamp › Hus1 0.56 38.0 2.96e-01 71.8% 90.6%
4963795 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.56 38.0 3.77e-01 70.4% 92.0%
3593128 219.1.1.0 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases 0.55 49.0 3.13e-01 100.0% 30.6%
3690327 4099.1.1.2 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spindle_Spc25 0.54 38.0 3.38e-01 76.1% 60.9%
4019464 9.4.1.0 ↗ beta barrels › Lipocalins/Streptavidin › D-aminopeptidase, middle and C-terminal domains › D-aminopeptidase, middle and C-terminal domains 0.53 44.0 4.15e-01 95.8% 92.2%
3649722 219.1.1.3 ↗ a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › UCH 0.53 46.0 2.83e-01 100.0% 28.9%
4423905 4051.1.1.8 ↗ a+b two layers › a+b domain in Capz › a+b domain in Capz › a+b domain in Capz › PF26204 0.52 43.0 3.19e-01 97.2% 70.5%
3201714 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.52 37.0 4.14e-01 83.1% 100.0%
3710799 206.1.1.0 ↗ a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase 0.51 39.0 2.39e-01 83.1% 90.0%
4251394 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.50 40.0 2.81e-01 91.5% 45.3%