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OQ067375.1__WBF83048.1__a48_208__00209
Bact-VirOQ067375.1__WBF83048.1__a48_208__00209
Identity
- Accession:
- OQ067375 ↗
- Kingdom:
- phage
Quality
81.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Pantevenvirales›
Straboviridae›
Tequatrovirus›
Escherichia_phage_a48
TaxID: 3017792
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-79
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26897.1 best | Phage_T4_Y04OP | 90.0 | 2.30e-25 | 100.0% | 23.8% |
CATH (95)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c19A01 | 3.30.70.1380 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transcriptional regulatory protein pf0864 domain like | 0.86 | 56.0 | 5.13e-01 | 88.5% | 52.5% |
| 4ushA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.82 | 50.0 | 4.56e-01 | 89.7% | 47.6% |
| 3ce8A00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.81 | 53.0 | 5.02e-01 | 88.5% | 58.4% |
| 3kg0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.79 | 55.0 | 5.06e-01 | 89.7% | 57.7% |
| 1jyoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.79 | 49.0 | 4.05e-01 | 100.0% | 37.7% |
| 4hl9A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.77 | 52.0 | 4.92e-01 | 87.2% | 58.5% |
| 2gffA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.77 | 52.0 | 4.87e-01 | 87.2% | 57.3% |
| 1xppD00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.76 | 54.0 | 4.92e-01 | 100.0% | 57.4% |
| 4qjvB00 | 3.30.1360.10 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › RNA polymerase, RBP11-like subunit | 0.75 | 55.0 | 5.14e-01 | 100.0% | 63.8% |
| 3bdeB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.75 | 55.0 | 5.05e-01 | 89.7% | 60.6% |
| 4zosB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.74 | 52.0 | 4.84e-01 | 89.7% | 58.8% |
| 1pu1A00 | 3.30.300.100 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like | 0.74 | 47.0 | 4.45e-01 | 71.8% | 54.9% |
| 4dpoB00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.73 | 51.0 | 4.69e-01 | 89.7% | 56.4% |
| 3gz7B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 50.0 | 4.69e-01 | 89.7% | 58.2% |
| 1q8bA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.72 | 50.0 | 4.77e-01 | 88.5% | 61.3% |
| 3i24B00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.72 | 63.0 | 5.17e-01 | 100.0% | 54.0% |
| 2g5fB00 | 3.60.120.10 | Alpha Beta › 4-Layer Sandwich › Anthranilate synthase › Anthranilate synthase | 0.72 | 65.0 | 4.02e-01 | 100.0% | 21.4% |
| 2f1fA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.71 | 44.0 | 4.45e-01 | 92.3% | 62.0% |
| 2pgcA02 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 50.0 | 4.58e-01 | 88.5% | 55.7% |
| 2fb0A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 50.0 | 4.67e-01 | 88.5% | 61.7% |
| 2pgcC01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.70 | 50.0 | 4.66e-01 | 89.7% | 60.8% |
| 4bfeA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.70 | 45.0 | 4.53e-01 | 100.0% | 64.2% |
| 2bbeA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 50.0 | 4.61e-01 | 91.0% | 58.3% |
| 5kfzA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.69 | 58.0 | 5.00e-01 | 92.3% | 98.4% |
| 3fmbA01 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.69 | 52.0 | 4.86e-01 | 89.7% | 64.0% |
| 3kkfA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.68 | 48.0 | 4.41e-01 | 89.7% | 55.2% |
| 7k0xA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.68 | 47.0 | 4.73e-01 | 100.0% | 71.8% |
| 1l2mA00 | 3.40.1310.20 | Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › | 0.68 | 47.0 | 4.07e-01 | 94.9% | 47.5% |
| 2raqA01 | 3.30.70.1340 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › MTH889-like domain | 0.68 | 44.0 | 4.31e-01 | 88.5% | 61.2% |
| 5xoyB02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 54.0 | 4.85e-01 | 88.5% | 72.9% |
| 3uebF00 | 3.30.300.100 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › MTH677-like | 0.66 | 53.0 | 4.90e-01 | 87.2% | 68.0% |
| 1sqeA00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 47.0 | 4.33e-01 | 89.7% | 57.4% |
| 4pxeA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.66 | 53.0 | 4.63e-01 | 87.2% | 67.5% |
| 1fp5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.66 | 53.0 | 4.91e-01 | 100.0% | 68.0% |
| 5yppA00 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.66 | 44.0 | 4.22e-01 | 84.6% | 60.0% |
| 1jmtA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.65 | 53.0 | 4.95e-01 | 89.7% | 75.5% |
| 3g2fA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.65 | 52.0 | 5.03e-01 | 100.0% | 77.0% |
| 3bm7A00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.65 | 48.0 | 4.35e-01 | 91.0% | 57.5% |
| 4fomA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.65 | 49.0 | 4.49e-01 | 100.0% | 62.6% |
| 3fz2A00 | 3.30.70.1700 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Phage minor tail protein U | 0.64 | 57.0 | 4.86e-01 | 100.0% | 67.2% |
| 4bfiB02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.64 | 45.0 | 4.30e-01 | 100.0% | 63.3% |
| 3go9A02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.63 | 55.0 | 4.03e-01 | 98.7% | 38.2% |
| 6ofsA02 | 3.30.830.10 | Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like | 0.63 | 55.0 | 4.03e-01 | 98.7% | 38.8% |
| 2x3gA00 | 3.30.70.1910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 45.0 | 4.01e-01 | 91.0% | 51.7% |
| 4i0kA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.63 | 47.0 | 4.36e-01 | 100.0% | 64.2% |
| 3n5fA02 | 3.30.70.360 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.63 | 49.0 | 4.29e-01 | 91.0% | 57.0% |
| 3e3pA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.62 | 50.0 | 5.09e-01 | 96.2% | 88.5% |
| 4ndhB00 | 3.30.428.10 | Alpha Beta › 2-Layer Sandwich › HIT family, subunit A › HIT-like | 0.62 | 54.0 | 4.22e-01 | 100.0% | 44.4% |
| 4za1C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 42.0 | 3.98e-01 | 89.7% | 59.8% |
| 2w59A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 48.0 | 4.49e-01 | 100.0% | 67.0% |
| 1tz0B00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 43.0 | 4.06e-01 | 89.7% | 59.8% |
| 6x4tA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.61 | 45.0 | 4.36e-01 | 98.7% | 70.6% |
| 4djbA00 | 3.30.70.2870 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 | 0.61 | 49.0 | 4.32e-01 | 89.7% | 59.3% |
| 4i6yA02 | 3.30.70.420 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Hydroxymethylglutaryl-CoA reductase, class I/II, NAD/NADP-binding domain | 0.61 | 45.0 | 4.05e-01 | 88.5% | 56.4% |
| 4ozjA00 | 3.30.70.120 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 42.0 | 3.90e-01 | 88.5% | 55.8% |
| 3bp6B02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.60 | 42.0 | 4.11e-01 | 100.0% | 65.9% |
| 4dmzA02 | 3.30.70.2880 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.60 | 44.0 | 3.72e-01 | 93.6% | 45.3% |
| 3qkbA00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.60 | 47.0 | 4.47e-01 | 87.2% | 80.9% |
| 4azsA02 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.60 | 48.0 | 4.83e-01 | 100.0% | 86.4% |
| 1repC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.59 | 53.0 | 5.06e-01 | 100.0% | 87.9% |
| 2od6C00 | 3.30.70.100 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.59 | 44.0 | 4.07e-01 | 89.7% | 60.7% |
| 3e23A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.58 | 50.0 | 3.72e-01 | 94.9% | 84.8% |
| 4bbyA05 | 3.30.300.330 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › | 0.58 | 47.0 | 4.32e-01 | 96.2% | 66.7% |
| 4fprB00 | 3.30.70.2910 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.58 | 45.0 | 3.94e-01 | 88.5% | 62.5% |
| 2nraC02 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.58 | 50.0 | 4.67e-01 | 100.0% | 90.2% |
| 7r3eB02 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.57 | 48.0 | 3.89e-01 | 96.2% | 68.7% |
| 3pg1A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.57 | 49.0 | 4.27e-01 | 100.0% | 62.0% |
| 1omsA00 | 3.30.70.1050 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Trigger factor ribosome-binding domain | 0.57 | 48.0 | 4.34e-01 | 98.7% | 96.5% |
| 3duwA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.57 | 50.0 | 3.65e-01 | 98.7% | 82.2% |
| 3o4oB03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 49.0 | 4.39e-01 | 100.0% | 67.9% |
| 2nrqA00 | 3.30.1440.10 | Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 | 0.56 | 41.0 | 3.44e-01 | 84.6% | 44.5% |
| 6x6aA01 | 3.40.50.1820 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain | 0.56 | 47.0 | 3.25e-01 | 94.9% | 44.5% |
| 5mmiU01 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.56 | 44.0 | 4.37e-01 | 100.0% | 84.1% |
| 1s28A00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.56 | 40.0 | 3.53e-01 | 97.4% | 47.7% |
| 2ktyA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.55 | 49.0 | 4.14e-01 | 100.0% | 63.4% |
| 4ofyD02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 44.0 | 3.99e-01 | 100.0% | 63.6% |
| 2bkyX00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.55 | 43.0 | 4.23e-01 | 98.7% | 77.9% |
| 1vr4E00 | 3.30.110.70 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Hypothetical protein apc22750. Chain B | 0.55 | 44.0 | 4.20e-01 | 88.5% | 78.5% |
| 2ab5B01 | 3.10.28.10 | Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases | 0.54 | 43.0 | 3.68e-01 | 100.0% | 53.1% |
| 5wt3A03 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 47.0 | 3.61e-01 | 97.4% | 79.0% |
| 2petA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 47.0 | 4.10e-01 | 100.0% | 64.7% |
| 1vdhA01 | 3.30.70.1030 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Apc35880; domain 1 | 0.53 | 42.0 | 3.74e-01 | 89.7% | 83.5% |
| 4d53A00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.53 | 46.0 | 3.91e-01 | 100.0% | 60.2% |
| 3lvtA03 | 2.60.40.2210 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 46.0 | 3.99e-01 | 100.0% | 67.4% |
| 2wmfA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.53 | 46.0 | 3.91e-01 | 97.4% | 59.5% |
| 1vm0A00 | 3.30.110.20 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain | 0.53 | 47.0 | 4.45e-01 | 100.0% | 83.9% |
| 3jamD02 | 3.30.1140.32 | Alpha Beta › 2-Layer Sandwich › Ribosomal protein S3 C-terminal domain › Ribosomal protein S3, C-terminal domain | 0.53 | 46.0 | 3.85e-01 | 97.4% | 72.9% |
| 5l09B00 | 3.30.450.80 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › Transcription factor LuxR-like, autoinducer-binding domain | 0.52 | 45.0 | 3.61e-01 | 98.7% | 72.0% |
| 3onrJ00 | 3.30.1660.10 | Alpha Beta › 2-Layer Sandwich › Dodecin subunit-like › Flavin-binding protein dodecin | 0.52 | 39.0 | 4.11e-01 | 88.5% | 92.6% |
| 3gnlA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 45.0 | 3.55e-01 | 96.2% | 90.3% |
| 4bxiA00 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.52 | 43.0 | 3.68e-01 | 100.0% | 58.2% |
| 4g2uA00 | 3.40.33.10 | Alpha Beta › 3-Layer(aba) Sandwich › Pathogenesis-related Protein p14a › CAP | 0.52 | 42.0 | 3.23e-01 | 96.2% | 42.9% |
| 1pbuA00 | 3.30.70.1010 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Translation elongation factor EF1B, gamma chain, conserved domain | 0.52 | 39.0 | 3.21e-01 | 92.3% | 40.7% |
| 3a27A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.51 | 42.0 | 3.17e-01 | 96.2% | 67.6% |
| 2rsvA00 | 1.10.510.10 | Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 | 0.50 | 43.0 | 2.74e-01 | 96.2% | 33.3% |
ECOD (94)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4664239 | 304.130.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion | 0.90 | 58.0 | 5.45e-01 | 88.5% | 56.7% |
| 5022932 | 304.130.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion | 0.89 | 59.0 | 5.74e-01 | 89.7% | 62.4% |
| 5050897 | 304.130.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion | 0.89 | 57.0 | 5.53e-01 | 88.5% | 60.0% |
| 4947614 | 304.130.1.1 ↗ | a+b two layers › Alpha-beta plaits › Uncharacterized protein MK0293 N-terminal domain › Uncharacterized protein MK0293 N-terminal domain › Ni_insertion | 0.89 | 58.0 | 5.46e-01 | 89.7% | 57.8% |
| 3604508 | 304.8.1.4 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NikR_C | 0.79 | 51.0 | 4.88e-01 | 88.5% | 57.8% |
| 4025874 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.77 | 56.0 | 5.07e-01 | 89.7% | 57.1% |
| 3520324 | 312.1.1.10 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › DUF4931_N | 0.76 | 70.0 | 5.92e-01 | 100.0% | 66.4% |
| 4012488 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.75 | 54.0 | 5.07e-01 | 89.7% | 62.1% |
| 3281978 | 304.159.1.1 ↗ | a+b two layers › Alpha-beta plaits › Alpha-beta plait domain in NisB › Alpha-beta plait domain in NisB › Lant_dehydr_C | 0.75 | 55.0 | 5.09e-01 | 93.6% | 61.0% |
| 5053097 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.73 | 50.0 | 4.71e-01 | 87.2% | 57.9% |
| 1168087 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.73 | 54.0 | 4.85e-01 | 88.5% | 56.9% |
| 135738 | 312.1.1.2 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related › HIT | 0.72 | 64.0 | 5.19e-01 | 100.0% | 53.6% |
| 5027827 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.71 | 51.0 | 4.99e-01 | 91.0% | 69.4% |
| 4990439 | 304.116.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor | 0.71 | 60.0 | 5.55e-01 | 93.6% | 72.0% |
| 3726378 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.71 | 51.0 | 4.68e-01 | 89.7% | 57.1% |
| 4957351 | 304.18.1.0 ↗ | a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS | 0.71 | 47.0 | 4.72e-01 | 88.5% | 67.9% |
| 3493139 | 328.3.1.0 ↗ | a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain | 0.71 | 62.0 | 5.29e-01 | 96.2% | 96.8% |
| 5008586 | 304.116.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor | 0.71 | 59.0 | 5.52e-01 | 92.3% | 73.7% |
| 4957779 | 312.1.1.0 ↗ | a+b three layers › HIT-like › HIT-related › HIT-related | 0.71 | 64.0 | 4.95e-01 | 100.0% | 47.3% |
| 4956709 | 304.116.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor | 0.70 | 57.0 | 5.29e-01 | 85.9% | 71.6% |
| 5045865 | 304.116.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor | 0.70 | 59.0 | 5.55e-01 | 92.3% | 74.7% |
| 4350670 | 305.1.1.1 ↗ | a+b two layers › DCoH-like › RBP11-like subunits of RNA polymerase › RBP11-like subunits of RNA polymerase › RNA_pol_L | 0.70 | 58.0 | 5.14e-01 | 100.0% | 63.6% |
| 3667432 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.70 | 53.0 | 5.01e-01 | 100.0% | 67.4% |
| 5043656 | 304.116.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor | 0.70 | 57.0 | 5.36e-01 | 88.5% | 72.6% |
| 4948091 | 304.116.1.5 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor › DUF460 | 0.69 | 59.0 | 5.44e-01 | 93.6% | 72.0% |
| 5011307 | 304.116.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor | 0.69 | 58.0 | 5.30e-01 | 89.7% | 71.0% |
| 5005033 | 304.39.1.0 ↗ | a+b two layers › Alpha-beta plaits › Mechanosensitive channel protein MscS (YggB), C-terminal domain › Mechanosensitive channel protein MscS (YggB), C-terminal domain | 0.69 | 47.0 | 4.70e-01 | 88.5% | 68.8% |
| 5023875 | 304.116.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor | 0.69 | 59.0 | 5.51e-01 | 94.9% | 75.8% |
| 5012937 | 304.116.1.6 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in release factor › Ferredoxin-like domain in release factor › acVLRF1 | 0.69 | 57.0 | 5.29e-01 | 88.5% | 72.6% |
| 4944337 | 304.59.1.0 ↗ | a+b two layers › Alpha-beta plaits › MTH889-like › MTH889-like | 0.68 | 44.0 | 4.36e-01 | 88.5% | 61.2% |
| 146702 | 304.4.1.25 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF6854 | 0.68 | 50.0 | 4.59e-01 | 89.7% | 59.8% |
| 4887314 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.67 | 52.0 | 4.98e-01 | 100.0% | 72.2% |
| 3881301 | 11.1.1.363 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › C2-set_3 | 0.67 | 46.0 | 4.40e-01 | 100.0% | 61.1% |
| 3902600 | 304.133.1.1 ↗ | a+b two layers › Alpha-beta plaits › 26 kDa periplasmic immunogenic protein › 26 kDa periplasmic immunogenic protein › SIMPL | 0.67 | 56.0 | 5.11e-01 | 89.7% | 71.0% |
| 3382026 | 304.55.1.20 ↗ | a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains › Helitron_like_N, REP_ORF2-G2P | 0.66 | 52.0 | 4.22e-01 | 88.5% | 44.3% |
| 5000078 | 304.59.1.1 ↗ | a+b two layers › Alpha-beta plaits › MTH889-like › MTH889-like › DUF211 | 0.66 | 43.0 | 4.05e-01 | 88.5% | 54.7% |
| 3495330 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.66 | 58.0 | 3.67e-01 | 100.0% | 19.3% |
| 984477 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.66 | 53.0 | 4.92e-01 | 88.5% | 69.7% |
| 4004285 | 309.1.1.4 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C | 0.65 | 57.0 | 4.05e-01 | 97.4% | 35.4% |
| 4340137 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.65 | 56.0 | 3.76e-01 | 97.4% | 25.5% |
| 4941817 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.65 | 52.0 | 4.67e-01 | 88.5% | 62.4% |
| 3198172 | 206.1.1.70 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 | 0.65 | 56.0 | 3.64e-01 | 100.0% | 20.5% |
| 3594297 | 872.3.1.5 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 | 0.64 | 51.0 | 4.85e-01 | 87.2% | 74.7% |
| 3223461 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.64 | 43.0 | 4.36e-01 | 89.7% | 68.8% |
| 3588477 | 304.31.1.1 ↗ | a+b two layers › Alpha-beta plaits › HMG-CoA reductase › NAD-binding domain of HMG-CoA reductase › HMG-CoA_red | 0.64 | 47.0 | 4.20e-01 | 85.9% | 55.5% |
| 3413091 | 872.3.1.5 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 | 0.63 | 50.0 | 4.60e-01 | 88.5% | 76.2% |
| 3236767 | 4955.1.1.0 ↗ | a+b two layers › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit › permuted ferredoxin-like domain in yeast RNA-polymerase beta-prime subunit | 0.63 | 47.0 | 4.44e-01 | 78.2% | 81.1% |
| 4026602 | 873.1.1.4 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › TRAPP | 0.63 | 58.0 | 4.39e-01 | 100.0% | 44.6% |
| 2388574 | 309.1.1.0 ↗ | a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase | 0.63 | 54.0 | 3.90e-01 | 96.2% | 36.1% |
| 3220701 | 206.1.1.55 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › EcKL | 0.63 | 56.0 | 3.66e-01 | 100.0% | 22.9% |
| 1146572 | 304.152.1.1 ↗ | a+b two layers › Alpha-beta plaits › E4-ORF3 › E4-ORF3 › Adeno_E4_ORF3 | 0.62 | 48.0 | 4.32e-01 | 87.2% | 58.6% |
| 3482573 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.61 | 48.0 | 4.63e-01 | 87.2% | 76.7% |
| 4942971 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.61 | 51.0 | 4.11e-01 | 97.4% | 71.4% |
| 4959305 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.61 | 45.0 | 3.87e-01 | 88.5% | 49.6% |
| 5074889 | 878.1.1.1 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 › DUF3194 | 0.60 | 45.0 | 4.29e-01 | 80.8% | 72.6% |
| 4338725 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.60 | 51.0 | 4.62e-01 | 100.0% | 96.5% |
| 3411428 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.60 | 47.0 | 4.04e-01 | 88.5% | 63.0% |
| 180088 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.60 | 47.0 | 4.52e-01 | 87.2% | 83.5% |
| 3823551 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.60 | 51.0 | 4.16e-01 | 100.0% | 51.0% |
| 3476800 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.59 | 53.0 | 4.63e-01 | 100.0% | 86.7% |
| 4959304 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.59 | 46.0 | 3.99e-01 | 88.5% | 54.2% |
| 4169399 | 304.14.1.1 ↗ | a+b two layers › Alpha-beta plaits › Sporulation related repeat (SPOR) › Sporulation related repeat (SPOR) › SPOR | 0.59 | 45.0 | 4.58e-01 | 91.0% | 82.3% |
| 4318194 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.58 | 51.0 | 4.57e-01 | 100.0% | 95.7% |
| 3613889 | 878.1.1.0 ↗ | a+b two layers › Hypothetical protein MTH677 › Hypothetical protein MTH677 › Hypothetical protein MTH677 | 0.58 | 45.0 | 4.18e-01 | 83.3% | 78.0% |
| 4312327 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.58 | 51.0 | 4.18e-01 | 100.0% | 62.8% |
| 3609886 | 304.47.1.0 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain | 0.58 | 49.0 | 4.49e-01 | 91.0% | 71.0% |
| 4958412 | 304.4.1.0 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel | 0.58 | 44.0 | 3.82e-01 | 88.5% | 51.2% |
| 3609959 | 873.1.1.4 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › TRAPP | 0.58 | 50.0 | 3.97e-01 | 100.0% | 49.4% |
| 3719272 | 872.3.1.5 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like › YbjQ_2 | 0.58 | 44.0 | 4.61e-01 | 85.9% | 90.0% |
| 3705453 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.57 | 47.0 | 3.29e-01 | 89.7% | 60.0% |
| 3698586 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.57 | 49.0 | 3.19e-01 | 100.0% | 19.8% |
| 4311026 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.57 | 50.0 | 4.31e-01 | 100.0% | 88.8% |
| 3997567 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.56 | 49.0 | 3.77e-01 | 98.7% | 42.2% |
| 4628544 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.56 | 49.0 | 4.37e-01 | 100.0% | 95.7% |
| 3773609 | 304.15.1.6 ↗ | a+b two layers › Alpha-beta plaits › Viral DNA-binding domain › Viral DNA-binding domain › SGT1 | 0.56 | 44.0 | 3.46e-01 | 91.0% | 38.9% |
| 5012996 | 273.1.1.0 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like | 0.56 | 48.0 | 4.25e-01 | 96.2% | 69.0% |
| 2512800 | 304.4.1.9 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Chlor_dismutase | 0.56 | 44.0 | 3.75e-01 | 88.5% | 92.7% |
| 3964094 | 273.1.1.1 ↗ | a+b three layers › PR-1-like › PR-1-like › PR-1-like › CAP | 0.55 | 47.0 | 3.92e-01 | 100.0% | 64.0% |
| 4233442 | 304.4.1.54 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › Amnionless | 0.55 | 45.0 | 3.97e-01 | 93.6% | 65.8% |
| 5191 | 304.4.1.28 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › DUF6974 | 0.54 | 41.0 | 3.75e-01 | 89.7% | 58.9% |
| 3889897 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.54 | 39.0 | 3.53e-01 | 87.2% | 53.5% |
| 5035799 | 304.57.1.1 ↗ | a+b two layers › Alpha-beta plaits › Rpp14/Pop5-like › Rpp14/Pop5-like › RNase_P_Rpp14 | 0.54 | 41.0 | 3.59e-01 | 82.1% | 58.1% |
| 4943593 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.53 | 46.0 | 3.88e-01 | 100.0% | 65.0% |
| 3588078 | 872.3.1.0 ↗ | a+b two layers › Dodecin subunit-like › YbjQ-like › YbjQ-like | 0.53 | 42.0 | 4.08e-01 | 88.5% | 77.8% |
| 4412399 | 306.7.1.1 ↗ | a+b two layers › Glucose permease domain IIB-like › Trigger factor ribosome-binding domain › Trigger factor ribosome-binding domain › Trigger_N | 0.53 | 45.0 | 4.08e-01 | 100.0% | 97.4% |
| 4945238 | 3016.1.1.0 ↗ | a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases | 0.53 | 45.0 | 3.75e-01 | 100.0% | 58.0% |
| 3872839 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.53 | 41.0 | 3.35e-01 | 93.6% | 43.2% |
| 3186440 | 872.1.1.0 ↗ | a+b two layers › Dodecin subunit-like › Flavin-binding protein dodecin-like › Flavin-binding protein dodecin-like | 0.53 | 39.0 | 4.17e-01 | 83.3% | 96.9% |
| 3690206 | 304.4.1.4 ↗ | a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM | 0.51 | 39.0 | 3.50e-01 | 93.6% | 55.0% |
| 4001719 | 304.9.1.1 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD › RRM_1 | 0.51 | 34.0 | 3.24e-01 | 87.2% | 55.8% |
| 4945193 | 225.1.1.0 ↗ | a+b two layers › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase-like › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase › ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase | 0.51 | 43.0 | 3.69e-01 | 100.0% | 63.6% |
| 1407174 | 4142.1.1.2 ↗ | a+b two layers › YehR-like › YehR-like › YehR-like › SP_0191-like | 0.51 | 42.0 | 3.63e-01 | 100.0% | 62.1% |
| 3922606 | 304.47.1.1 ↗ | a+b two layers › Alpha-beta plaits › SEA domain › SEA domain › SEA | 0.51 | 41.0 | 3.55e-01 | 89.7% | 60.0% |
| 1141446 | 206.1.1.1 ↗ | a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase | 0.50 | 43.0 | 2.77e-01 | 96.2% | 34.1% |
D2
medium
residues 127-177
Domain cluster:
rep: OL964745.1__UJD20303.1__T47t1_90__00090__D47-96
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF26897.1 best | Phage_T4_Y04OP | 48.5 | 1.00e-12 | 100.0% | 13.5% |