←Back to structures
OQ067476.1__WCD44091.1__Kuura_013__00013
Bact-VirOQ067476.1__WCD44091.1__Kuura_013__00013
Identity
- Accession:
- OQ067476 ↗
- Kingdom:
- phage
Quality
78.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-103
Domain cluster:
representative
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3613695 | 3922.1.1.230 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › DRC10_N | 0.64 | 45.0 | 3.88e-01 | 74.3% | 46.3% |
| 3498506 | 109.4.1.595 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › COG7 | 0.58 | 48.0 | 3.24e-01 | 89.1% | 24.8% |
D2
high
residues 118-229
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2wnoA01 | 2.60.120.290 | Mainly Beta › Sandwich › Jelly Rolls › Spermadhesin, CUB domain | 0.56 | 41.0 | 4.13e-01 | 77.7% | 79.6% |
| 5c71A02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.53 | 30.0 | 3.20e-01 | 74.1% | 63.5% |
| 2b7yA00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.52 | 45.0 | 3.88e-01 | 95.5% | 95.6% |
| 3hbkA00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.52 | 45.0 | 3.66e-01 | 100.0% | 69.7% |
| 4m00A01 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.51 | 44.0 | 3.53e-01 | 97.3% | 79.0% |
| 3h3lC00 | 2.60.120.560 | Mainly Beta › Sandwich › Jelly Rolls › Exo-inulinase; domain 1 | 0.51 | 45.0 | 3.60e-01 | 97.3% | 64.1% |
| 8aasC01 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.51 | 34.0 | 3.52e-01 | 94.6% | 74.5% |
ECOD (12)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5056544 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.75 | 29.0 | 4.09e-01 | 94.6% | 72.7% |
| 4002789 | 214.1.1.1 ↗ | a+b two layers › SH2 › SH2 › SH2 › SH2 | 0.63 | 37.0 | 3.90e-01 | 97.3% | 62.9% |
| 3998976 | 391.1.1.0 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module | 0.63 | 24.0 | 3.50e-01 | 84.8% | 80.0% |
| 3940986 | 214.1.1.0 ↗ | a+b two layers › SH2 › SH2 › SH2 | 0.62 | 35.0 | 4.08e-01 | 94.6% | 80.0% |
| 3515600 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.56 | 33.0 | 4.20e-01 | 79.5% | 100.0% |
| 4985588 | 274.1.1.0 ↗ | a+b two layers › Pili subunits › Pili subunits › Pili subunits | 0.55 | 45.0 | 4.27e-01 | 86.6% | 95.5% |
| 3902618 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 27.0 | 2.79e-01 | 89.3% | 46.7% |
| 4771748 | 10.1.1.2 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases › Lectin_legB | 0.52 | 45.0 | 3.87e-01 | 95.5% | 95.6% |
| 3626692 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 34.0 | 3.96e-01 | 79.5% | 100.0% |
| 4133593 | 2.1.1.275 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF31102 | 0.51 | 45.0 | 3.92e-01 | 98.2% | 85.1% |
| 4532972 | 7512.1.1.24 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_5 | 0.51 | 45.0 | 3.35e-01 | 98.2% | 96.2% |
| 4081958 | 2.1.1.275 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF31102 | 0.50 | 44.0 | 3.63e-01 | 97.3% | 87.3% |