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OQ067476.1__WCD44093.1__Kuura_015__00015
Bact-VirOQ067476.1__WCD44093.1__Kuura_015__00015
Identity
- Accession:
- OQ067476 ↗
- Kingdom:
- phage
Quality
75.7
mean pLDDT
Cluster
View cluster (60 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-40_143-211
Domain cluster:
representative
CATH (34)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2oxlA00 | 1.20.5.5260 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.70 | 37.0 | 4.78e-01 | 75.7% | 90.3% |
| 3s6jE02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.63 | 36.0 | 4.36e-01 | 82.2% | 87.0% |
| 4p3fA00 | 1.10.3450.40 | Mainly Alpha › Orthogonal Bundle › Hyaluronidase domain-like › Signal recognition particle, SRP68 subunit, RNA-binding domain | 0.63 | 45.0 | 3.68e-01 | 74.8% | 50.3% |
| 3rkoG00 | 1.10.287.3510 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.63 | 48.0 | 4.96e-01 | 82.2% | 86.0% |
| 3m03B00 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.62 | 43.0 | 4.56e-01 | 83.2% | 80.0% |
| 2ib0A01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.62 | 53.0 | 4.91e-01 | 91.6% | 88.9% |
| 2crbA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.62 | 48.0 | 5.07e-01 | 89.7% | 89.7% |
| 2fzfA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.61 | 53.0 | 4.73e-01 | 92.5% | 90.7% |
| 3n00A00 | 1.10.565.10 | Mainly Alpha › Orthogonal Bundle › Retinoid X Receptor › Retinoid X Receptor | 0.61 | 51.0 | 4.30e-01 | 90.7% | 73.9% |
| 3um7A03 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.60 | 45.0 | 4.63e-01 | 98.1% | 81.6% |
| 1txdA01 | 1.20.900.10 | Mainly Alpha › Up-down Bundle › Dbl Homology Domain; Chain A › Dbl homology (DH) domain | 0.60 | 56.0 | 4.29e-01 | 100.0% | 83.1% |
| 1vjxA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.60 | 51.0 | 4.59e-01 | 92.5% | 91.9% |
| 4w8pA02 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.60 | 46.0 | 4.32e-01 | 80.4% | 71.5% |
| 3zciA00 | 1.20.58.1660 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 51.0 | 4.20e-01 | 94.4% | 86.4% |
| 1gcvB00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.58 | 46.0 | 4.26e-01 | 85.0% | 94.1% |
| 3hhcC00 | 1.20.1250.60 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › Interferon lambda | 0.58 | 44.0 | 3.91e-01 | 82.2% | 57.0% |
| 2lqgA00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.57 | 47.0 | 4.35e-01 | 88.8% | 84.1% |
| 3jvoA00 | 1.10.3230.30 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein yqbg › Phage gp6-like head-tail connector protein | 0.57 | 44.0 | 4.69e-01 | 86.0% | 92.7% |
| 1u89A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.57 | 50.0 | 4.58e-01 | 95.3% | 79.9% |
| 3f1xA01 | 1.10.3130.10 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 | 0.57 | 43.0 | 3.95e-01 | 83.2% | 87.9% |
| 2rbdA01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.56 | 49.0 | 4.35e-01 | 93.5% | 86.7% |
| 3q1xA01 | 1.10.3130.10 | Mainly Alpha › Orthogonal Bundle › serine acetyltransferase, domain 1 › serine acetyltransferase, domain 1 | 0.56 | 43.0 | 4.03e-01 | 83.2% | 85.6% |
| 7wjlA01 | 3.40.800.20 | Alpha Beta › 3-Layer(aba) Sandwich › Arginase; Chain A › Histone deacetylase domain | 0.56 | 39.0 | 2.61e-01 | 73.8% | 28.0% |
| 3umbA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 39.0 | 4.38e-01 | 85.0% | 100.0% |
| 1yo7A00 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.54 | 45.0 | 4.41e-01 | 92.5% | 87.5% |
| 7qocA01 | 1.10.3210.10 | Mainly Alpha › Orthogonal Bundle › Hypothetical protein af1432 › Hypothetical protein af1432 | 0.53 | 44.0 | 3.69e-01 | 90.7% | 91.4% |
| 2gfhA02 | 1.20.120.710 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Haloacid dehalogenase hydrolase-like domain | 0.52 | 37.0 | 4.04e-01 | 88.8% | 93.0% |
| 3kkbA00 | 1.20.120.880 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Histidine kinase (KinB), sensor domain | 0.52 | 37.0 | 3.55e-01 | 78.5% | 62.7% |
| 5haxA01 | 1.20.58.1780 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.51 | 46.0 | 3.51e-01 | 98.1% | 74.9% |
| 1owlA02 | 1.25.40.80 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.51 | 40.0 | 3.83e-01 | 91.6% | 71.5% |
| 4nwpD00 | 1.20.1200.10 | Mainly Alpha › Up-down Bundle › Hypothetical Protein Ta1238; Chain: A; › Cobalamin adenosyltransferase-like | 0.51 | 44.0 | 3.92e-01 | 94.4% | 87.9% |
| 7lb8B01 | 1.10.3470.10 | Mainly Alpha › Orthogonal Bundle › ABC transporter involved in vitamin B12 uptake, BtuC › ABC transporter involved in vitamin B12 uptake, BtuC | 0.50 | 43.0 | 3.05e-01 | 92.5% | 73.2% |
| 2chnB03 | 1.20.58.460 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like | 0.50 | 45.0 | 3.73e-01 | 96.3% | 75.6% |
| 6iknD01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.50 | 46.0 | 3.40e-01 | 100.0% | 56.2% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3497726 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.78 | 48.0 | 3.63e-01 | 82.2% | 29.1% |
| 3714307 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.67 | 51.0 | 4.32e-01 | 77.6% | 88.7% |
| 3496602 | 109.3.1.130 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › TRPM2 | 0.66 | 57.0 | 3.95e-01 | 90.7% | 55.4% |
| 5001524 | 3843.1.1.1 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › Oxidored_q2 | 0.66 | 51.0 | 5.38e-01 | 80.4% | 97.9% |
| 3616689 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.65 | 38.0 | 4.03e-01 | 84.1% | 65.3% |
| 4982026 | 150.1.1.209 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › DUF7121 | 0.65 | 58.0 | 5.31e-01 | 97.2% | 77.1% |
| 3529859 | 4177.1.1.10 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › GMIP-like_FCH | 0.65 | 47.0 | 3.38e-01 | 74.8% | 77.6% |
| 3548521 | 109.3.1.130 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › TRPM2 | 0.64 | 56.0 | 3.88e-01 | 94.4% | 85.9% |
| 4911568 | 109.3.1.174 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › YVC1_C, TRPM2 | 0.63 | 54.0 | 3.53e-01 | 90.7% | 35.8% |
| 5014460 | 150.1.1.3 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › Rubrerythrin | 0.63 | 57.0 | 4.90e-01 | 98.1% | 87.3% |
| 3504421 | 4177.1.1.2 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR | 0.62 | 44.0 | 3.49e-01 | 73.8% | 82.2% |
| 3789396 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.62 | 44.0 | 3.15e-01 | 73.8% | 71.9% |
| 4501827 | 3843.1.1.1 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › Oxidored_q2 | 0.62 | 47.0 | 4.80e-01 | 80.4% | 81.9% |
| 4879750 | 109.3.1.130 ↗ | alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat › TRPM2 | 0.61 | 53.0 | 3.89e-01 | 90.7% | 58.5% |
| 5010956 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.61 | 43.0 | 4.61e-01 | 73.8% | 92.6% |
| 3623844 | 109.4.1.220 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › SMG1 | 0.60 | 46.0 | 2.72e-01 | 80.4% | 37.9% |
| 3711742 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 44.0 | 4.34e-01 | 75.7% | 79.1% |
| 3266933 | 171.1.1.1 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like › Ribonuclease_3 | 0.59 | 50.0 | 4.34e-01 | 90.7% | 89.4% |
| 5057581 | 102.1.1.0 ↗ | alpha arrays › HhH/H2TH › SAM/DNA-glycosylase › SAM domain-like | 0.59 | 38.0 | 4.29e-01 | 86.0% | 92.0% |
| 3636681 | 4177.1.1.1 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › FCH | 0.58 | 43.0 | 3.10e-01 | 77.6% | 70.0% |
| 5077164 | 3447.1.1.4 ↗ | alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › PEMT | 0.58 | 48.0 | 4.43e-01 | 90.7% | 87.1% |
| 3419702 | 633.4.1.1 ↗ | alpha bundles › Bromodomain-like › Plant invertase/pectin methylesterase inhibitor › Plant invertase/pectin methylesterase inhibitor › PMEI | 0.58 | 50.0 | 4.45e-01 | 95.3% | 69.0% |
| 5078967 | 3447.1.1.4 ↗ | alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › PEMT | 0.57 | 49.0 | 4.35e-01 | 94.4% | 88.2% |
| 4993176 | 3447.1.1.2 ↗ | alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › ICMT | 0.57 | 49.0 | 4.26e-01 | 96.3% | 89.7% |
| 3727021 | 101.1.10.33 ↗ | alpha arrays › HTH › HTH › Cyclin-like › Rrn7_cyclin_C | 0.57 | 44.0 | 3.87e-01 | 83.2% | 89.4% |
| 4484957 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.56 | 49.0 | 3.56e-01 | 94.4% | 71.7% |
| 4129121 | 3843.1.1.4 ↗ | alpha complex topology › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › NADH-quinone oxidoreductase subunit K › PhaG_MnhG_YufB | 0.55 | 42.0 | 4.32e-01 | 80.4% | 87.0% |
| 4486975 | 3447.1.1.2 ↗ | alpha bundles › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › Isoprenylcysteine carboxyl methyltransferase (ICMT) › ICMT | 0.55 | 46.0 | 3.84e-01 | 92.5% | 64.7% |
| 5024001 | 604.6.1.0 ↗ | alpha bundles › Spectrin repeat-like › GAT-like domain › GAT-like domain | 0.55 | 45.0 | 4.70e-01 | 91.6% | 93.0% |
| 3399914 | 3758.1.1.44 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › DUF1397 | 0.54 | 40.0 | 3.17e-01 | 78.5% | 54.0% |
| 3613133 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.54 | 38.0 | 4.26e-01 | 73.8% | 95.3% |
| 3936021 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.54 | 47.0 | 3.80e-01 | 97.2% | 89.0% |
| 4008289 | 5050.1.1.9 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › MFS_1 | 0.53 | 45.0 | 3.66e-01 | 92.5% | 87.8% |
| 3173378 | 109.4.1.338 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › RIC1 | 0.53 | 45.0 | 3.35e-01 | 90.7% | 38.8% |
| 5064592 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.53 | 43.0 | 3.87e-01 | 87.9% | 69.3% |
| 3788741 | 109.4.1.58 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Not1 | 0.53 | 42.0 | 3.16e-01 | 87.9% | 48.9% |
| 3725707 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.50 | 43.0 | 3.78e-01 | 99.1% | 77.1% |
D2
high
residues 42-137