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OQ067476.1__WCD44122.1__Kuura_044__00044

Bact-Vir

OQ067476.1__WCD44122.1__Kuura_044__00044

Identity

Accession:
OQ067476 ↗
Kingdom:
phage

Quality

78.5 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Caulobacter_phage_Kuura

TaxID: 3017786

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-85
PDB
Domain cluster: rep: JX195166.1__AFQ22207.1__My1_048__00048__D4-73
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4yubB01 3.20.140.10 Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase 0.58 50.0 3.49e-01 97.6% 86.3%
1at0A00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.57 50.0 4.16e-01 97.6% 94.5%
4o1sA00 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.57 50.0 3.97e-01 97.6% 94.1%
2cw8A01 2.170.16.10 Mainly Beta › Beta Complex › Endonuclease - Pi-scei; Chain A, domain 1 › Hedgehog/Intein (Hint) domain 0.55 48.0 3.82e-01 97.6% 97.0%
1ffyA02 3.90.740.10 Alpha Beta › Alpha-Beta Complex › Isoleucyl-tRNA Synthetase; domain 2 › Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain 0.52 42.0 3.20e-01 90.4% 60.4%
ECOD (26)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3385437 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.86 62.0 5.79e-01 86.7% 62.0%
4554209 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.84 62.0 5.59e-01 86.7% 58.2%
3838774 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.83 59.0 5.39e-01 86.7% 58.1%
3964437 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.81 61.0 5.46e-01 86.7% 59.1%
2392036 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.80 62.0 5.47e-01 86.7% 59.3%
4421311 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.79 60.0 5.41e-01 86.7% 60.0%
3970095 3430.1.1.0 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain 0.78 63.0 5.61e-01 89.2% 61.7%
4486406 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.77 60.0 5.37e-01 94.0% 60.9%
4083034 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.77 64.0 5.74e-01 88.0% 66.4%
4674798 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.76 61.0 5.50e-01 88.0% 63.6%
3988098 3430.1.1.1 ↗ a+b complex topology › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › Primosome assembly protein PriA 3' DNA-binding domain › PriA_3primeBD 0.74 63.0 5.46e-01 94.0% 62.5%
4565870 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.58 51.0 4.17e-01 97.6% 92.3%
4886584 3115.6.1.1 ↗ a+b two layers › GP2-like › Bacterial RNA polymerase subunit epsilon › Bacterial RNA polymerase subunit epsilon › RpoY 0.58 44.0 4.71e-01 83.1% 100.0%
3495262 69.1.1.1 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.57 50.0 3.92e-01 97.6% 86.7%
4600944 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.57 50.0 3.93e-01 97.6% 78.3%
4487998 69.1.1.1 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › Hint 0.57 50.0 3.93e-01 97.6% 78.3%
4983458 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.57 50.0 3.99e-01 97.6% 96.4%
5032319 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.57 49.0 4.09e-01 97.6% 96.0%
3026658 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.57 50.0 4.05e-01 98.8% 97.5%
3949431 69.1.1.0 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint 0.56 49.0 4.06e-01 97.6% 96.7%
3500623 375.12.1.1 ↗ few secondary structure elements › Rubredoxin-like › Nicotinate phosphoribosyltransferase C-terminal domain-related › Nicotinate phosphoribosyltransferase C-terminal domain-related › NAPRTase_C 0.56 46.0 4.02e-01 92.8% 93.1%
1556795 375.12.1.1 ↗ few secondary structure elements › Rubredoxin-like › Nicotinate phosphoribosyltransferase C-terminal domain-related › Nicotinate phosphoribosyltransferase C-terminal domain-related › NAPRTase_C 0.54 46.0 4.00e-01 97.6% 92.0%
3688400 73.1.1.1 ↗ beta sandwiches › SMAD/FHA domain › SMAD/FHA domain › SMAD/FHA domain › FHA 0.53 37.0 3.03e-01 72.3% 96.1%
4598948 382.1.1.0 ↗ few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.53 35.0 3.79e-01 83.1% 86.2%
3602706 69.1.1.3 ↗ beta complex topology › Hedgehog/intein › Hedgehog/intein › Hint › PT-HINT 0.53 46.0 3.93e-01 97.6% 94.9%
3192976 3767.1.1.0 ↗ a+b two layers › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain › Giardia Dicer N-terminal domain 0.52 42.0 3.55e-01 95.2% 90.0%
D2 medium residues 87-123
PDB
Domain cluster: representative