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OQ067477.1__WCD44151.1__Lumi_012__00012

Bact-Vir

OQ067477.1__WCD44151.1__Lumi_012__00012

Identity

Accession:
OQ067477 ↗
Kingdom:
phage

Quality

79.2 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Xylophilus_phage_Lumi

TaxID: 3017788

Cluster

View cluster (2 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 2-118
PDB
Domain cluster: rep: KT001914.1__AKU43540.1__CPT_Seuss14__00014__D2-92
CATH (4)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1t9kA01 1.20.120.420 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 0.60 42.0 4.00e-01 85.5% 61.4%
7wntA02 3.10.20.580 Alpha Beta › Roll › Ubiquitin-like (UB roll) › 0.57 30.0 3.48e-01 75.2% 71.8%
1a62A01 1.10.720.10 Mainly Alpha › Orthogonal Bundle › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › 0.56 24.0 3.67e-01 75.2% 100.0%
1vs9O01 6.10.160.10 Special › Helix non-globular › Transcription Termination Factor Rho, Rna-binding Domain; Chain A, Domain 1 › 0.50 25.0 3.19e-01 74.4% 90.9%
ECOD (4)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5009 4076.3.1.2 ↗ a+b two layers › L9 N-domain-like › GINS/PriA/YqbF domain › GINS/PriA/YqbF domain › YqbF 0.68 31.0 4.44e-01 71.8% 100.0%
4954852 101.1.2.136 ↗ alpha arrays › HTH › HTH › winged helix domain › HTH_20 0.56 40.0 3.50e-01 74.4% 52.0%
4026983 604.1.1.135 ↗ alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat › DUF155 0.53 49.0 3.89e-01 97.4% 60.5%
3254492 4026.1.1.0 ↗ a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) 0.52 36.0 3.48e-01 70.9% 82.6%