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OQ067477.1__WCD44160.1__Lumi_021__00021
Bact-VirOQ067477.1__WCD44160.1__Lumi_021__00021
Identity
- Accession:
- OQ067477 ↗
- Kingdom:
- phage
Quality
86.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 10-124
Domain cluster:
rep: IMGVR_UViG_3300005099_000002-3300005099-Ga0072682_1005676__D4-125
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4divV01 | 2.40.30.200 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.71 | 58.0 | 5.51e-01 | 100.0% | 73.7% |
| 4feuF01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.68 | 36.0 | 4.46e-01 | 99.1% | 82.2% |
| 4g59C01 | 2.60.40.2920 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.67 | 33.0 | 3.47e-01 | 100.0% | 51.5% |
| 2kr7A02 | 2.40.10.330 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.65 | 31.0 | 4.15e-01 | 79.1% | 89.5% |
| 3lnnA02 | 2.40.30.170 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain | 0.63 | 38.0 | 4.18e-01 | 100.0% | 74.2% |
| 2k4qA00 | 4.10.410.40 | Few Secondary Structures › Irregular › Factor Xa Inhibitor › | 0.60 | 50.0 | 4.49e-01 | 100.0% | 65.4% |
| 6toaE01 | 2.40.10.270 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Bacteriophage SPP1 head-tail adaptor protein | 0.60 | 36.0 | 3.82e-01 | 97.4% | 68.4% |
| 3fn9C04 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 28.0 | 3.12e-01 | 100.0% | 55.4% |
| 2y3uA02 | 3.30.980.50 | Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › | 0.57 | 40.0 | 4.09e-01 | 100.0% | 74.3% |
| 5dm6S01 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.56 | 38.0 | 4.34e-01 | 100.0% | 93.0% |
| 1feuA01 | 2.40.240.10 | Mainly Beta › Beta Barrel › Ribosomal Protein L25; Chain P › Ribosomal Protein L25; Chain P | 0.56 | 38.0 | 4.25e-01 | 100.0% | 89.0% |
| 5u8rA03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.51 | 31.0 | 3.18e-01 | 100.0% | 62.0% |
| 2bolB02 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 33.0 | 3.27e-01 | 100.0% | 60.2% |
| 3lydA01 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.50 | 41.0 | 3.86e-01 | 100.0% | 71.8% |
ECOD (15)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3965192 | 1.1.13.67 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › DUF2460 | 0.85 | 72.0 | 7.26e-01 | 100.0% | 89.5% |
| 4952430 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.70 | 46.0 | 4.77e-01 | 100.0% | 70.0% |
| 5004559 | 1.1.13.75 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › CIS_tube | 0.69 | 63.0 | 5.99e-01 | 100.0% | 84.4% |
| 4157825 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.68 | 58.0 | 5.56e-01 | 100.0% | 80.8% |
| 3943681 | 1.1.13.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Dit_like | 0.66 | 60.0 | 5.49e-01 | 100.0% | 76.0% |
| 4929634 | 1.1.5.47 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_tube_2 | 0.66 | 52.0 | 3.96e-01 | 100.0% | 35.9% |
| 4957560 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 52.0 | 4.97e-01 | 100.0% | 77.7% |
| 4988100 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.60 | 48.0 | 4.78e-01 | 100.0% | 83.1% |
| 3718989 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 37.0 | 3.84e-01 | 100.0% | 70.0% |
| 3503045 | 11.2.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › C2 | 0.56 | 34.0 | 3.29e-01 | 100.0% | 51.1% |
| 3449841 | 310.3.1.14 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related › DUF7049 | 0.56 | 39.0 | 4.23e-01 | 100.0% | 89.4% |
| 3589778 | 1.1.5.78 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Phage_TTP_1 | 0.55 | 45.0 | 3.91e-01 | 100.0% | 58.2% |
| 3763834 | 11.1.1.819 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PTHB1_GAE | 0.55 | 36.0 | 3.54e-01 | 100.0% | 60.8% |
| 4030848 | 1.1.13.52 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › Phage_TTP_1 | 0.54 | 44.0 | 3.90e-01 | 100.0% | 61.3% |
| 4928369 | 881.1.1.0 ↗ | a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like | 0.52 | 36.0 | 3.42e-01 | 100.0% | 61.2% |