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OQ067477.1__WCD44167.1__Lumi_028__00028

Bact-Vir

OQ067477.1__WCD44167.1__Lumi_028__00028

Identity

Accession:
OQ067477 ↗
Kingdom:
phage

Quality

83.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 32-156
PDB
CATH (48)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6cl5A01 2.60.40.3940 Mainly Beta › Sandwich › Immunoglobulin-like › 0.70 48.0 5.23e-01 97.6% 85.3%
4i0wD02 2.60.120.1290 Mainly Beta › Sandwich › Jelly Rolls › 0.62 48.0 4.77e-01 92.8% 77.7%
4r7kA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 48.0 4.39e-01 84.0% 88.7%
2vneA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 48.0 4.43e-01 84.0% 91.4%
4oi4C01 2.60.120.1030 Mainly Beta › Sandwich › Jelly Rolls › Clp1, DNA binding domain 0.61 35.0 4.18e-01 93.6% 84.5%
3ijtB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 48.0 4.63e-01 84.0% 95.1%
3ni8A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 47.0 4.59e-01 82.4% 96.4%
6ka3A01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 48.0 4.56e-01 84.0% 99.3%
1tw0A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.61 48.0 4.48e-01 84.0% 95.5%
3klxB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 47.0 4.15e-01 84.0% 81.2%
3q63F00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 46.0 4.49e-01 83.2% 95.7%
2zylA02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.59 48.0 4.04e-01 87.2% 83.4%
4xrtA02 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 48.0 4.43e-01 86.4% 98.1%
4xrtA01 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 46.0 4.45e-01 82.4% 95.8%
2wqlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 47.0 4.39e-01 84.0% 98.7%
2le1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.59 47.0 4.39e-01 84.0% 93.4%
2flhB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 47.0 4.38e-01 84.0% 97.4%
3rt0C00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 46.0 4.17e-01 84.0% 87.2%
1fm4A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 47.0 4.33e-01 85.6% 99.4%
2pcsA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 45.0 4.25e-01 82.4% 94.7%
1xuvA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 49.0 4.51e-01 92.8% 99.4%
1z94B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 45.0 4.34e-01 84.0% 98.6%
1vjhA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 45.0 4.67e-01 84.0% 95.8%
3rd6A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 45.0 4.35e-01 84.8% 97.9%
6xrbA01 3.40.1000.10 Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich 0.57 41.0 3.94e-01 73.6% 71.2%
7szeB02 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.57 45.0 4.01e-01 85.6% 83.7%
1xn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.57 44.0 4.33e-01 83.2% 97.1%
1stmA00 2.60.120.220 Mainly Beta › Sandwich › Jelly Rolls › Satellite virus coat domain 0.56 50.0 4.87e-01 99.2% 94.3%
4gn2A00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.55 39.0 3.15e-01 72.8% 89.2%
2nn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 45.0 4.07e-01 88.0% 80.7%
3otlA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 44.0 4.13e-01 85.6% 95.4%
3p9vA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 43.0 4.00e-01 83.2% 94.3%
4fpwB00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.55 46.0 4.23e-01 90.4% 84.5%
3nqnA00 3.30.530.70 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › Uncharacterised protein PF12723, DUF3809 0.54 43.0 4.05e-01 85.6% 98.7%
4indA03 2.60.120.1330 Mainly Beta › Sandwich › Jelly Rolls › 0.54 45.0 4.66e-01 100.0% 96.6%
6jhsA00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.54 48.0 3.83e-01 100.0% 66.9%
3n0qA01 3.90.380.10 Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 0.53 48.0 3.73e-01 100.0% 92.6%
1ohfA02 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 49.0 3.67e-01 100.0% 91.9%
2bpa200 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.53 46.0 4.11e-01 95.2% 73.7%
3pu2B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 44.0 4.13e-01 92.0% 98.7%
1m06G00 2.60.120.20 Mainly Beta › Sandwich › Jelly Rolls › 0.52 45.0 3.98e-01 96.0% 72.7%
2zfdB00 3.30.310.80 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 0.52 45.0 4.67e-01 94.4% 98.3%
2h36X00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.52 37.0 3.94e-01 79.2% 85.2%
5tfqA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.52 37.0 2.85e-01 73.6% 84.1%
1ex0A03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 38.0 3.95e-01 96.8% 86.8%
1xkzC00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.51 38.0 3.02e-01 76.8% 82.7%
2o3bB00 3.40.1460.10 Alpha Beta › 3-Layer(aba) Sandwich › Nuia › Nuclease A inhibitor-like 0.51 36.0 3.52e-01 72.8% 79.3%
4zelB01 2.60.120.310 Mainly Beta › Sandwich › Jelly Rolls › Copper type II, ascorbate-dependent monooxygenase, N-terminal domain 0.51 45.0 4.37e-01 100.0% 100.0%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4030396 331.4.1.0 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 0.66 52.0 5.17e-01 82.4% 96.9%
4971476 2499.1.1.0 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like 0.63 47.0 3.42e-01 92.0% 27.5%
5064207 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 47.0 5.16e-01 100.0% 99.0%
4873984 331.3.1.1 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Bet_v_1 0.61 49.0 4.66e-01 85.6% 98.0%
5046147 10.1.2.0 beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.61 55.0 4.69e-01 100.0% 96.1%
3829548 331.4.1.2 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › NAF 0.61 43.0 4.30e-01 81.6% 70.8%
3280871 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.61 48.0 4.36e-01 83.2% 92.1%
5039032 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.60 49.0 4.27e-01 86.4% 95.8%
4012193 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.60 42.0 4.49e-01 79.2% 81.8%
3278927 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.60 47.0 4.68e-01 82.4% 98.5%
3836814 331.3.1.1 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Bet_v_1 0.59 48.0 4.63e-01 84.8% 96.4%
3704313 331.9.1.0 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain 0.59 45.0 4.55e-01 83.2% 79.2%
3953711 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.59 46.0 4.44e-01 82.4% 98.6%
3959863 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.59 46.0 4.44e-01 82.4% 98.6%
143699 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.59 46.0 4.46e-01 82.4% 95.8%
3886734 331.4.1.7 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › DUF1499 0.59 46.0 4.20e-01 82.4% 67.9%
4303629 331.3.1.19 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › VanA_C 0.59 48.0 4.08e-01 87.2% 94.6%
3368968 331.3.1.25 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › PaO 0.59 48.0 3.62e-01 87.2% 64.7%
4975805 2499.1.1.0 a/b three-layered sandwiches › Subtilisin-like › Subtilisin-like › Subtilisin-like 0.59 48.0 3.23e-01 92.8% 22.0%
3278890 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.58 46.0 4.38e-01 84.8% 96.0%
5075975 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.58 49.0 4.44e-01 92.0% 93.5%
6317 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.58 49.0 4.51e-01 92.8% 99.4%
3022795 10.2.1.0 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) 0.58 53.0 3.55e-01 100.0% 70.8%
1715837 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.57 46.0 4.31e-01 84.0% 96.7%
408891 331.3.1.9 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › AHSA1 0.57 45.0 4.22e-01 83.2% 94.2%
3290314 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.57 45.0 4.06e-01 84.0% 82.1%
None 0.57 47.0 3.84e-01 88.0% 89.9%
3954428 331.3.1.18 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DAPG_hydrolase 0.57 48.0 3.76e-01 91.2% 92.5%
4929661 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.57 45.0 4.11e-01 83.2% 93.1%
None 0.57 46.0 3.95e-01 88.0% 92.3%
4962632 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.56 47.0 3.94e-01 88.8% 88.1%
5006530 331.3.1.18 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › DAPG_hydrolase 0.56 48.0 3.80e-01 92.0% 94.5%
5068203 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 34.0 3.80e-01 97.6% 80.0%
5040875 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.56 44.0 4.13e-01 83.2% 89.7%
3806929 331.9.1.1 a+b two layers › TBP-like › Subdomain of clathrin and coatomer appendage domain › Subdomain of clathrin and coatomer appendage domain › Alpha_adaptin_C 0.55 41.0 4.10e-01 81.6% 76.0%
3198929 331.4.1.3 a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › AdenylateSensor 0.55 42.0 4.11e-01 80.8% 98.6%
3732557 331.3.1.11 a+b two layers › TBP-like › Bet v1-like › Bet v1-like › Polyketide_cyc2 0.55 44.0 3.98e-01 85.6% 93.5%
3287676 222.1.1.0 a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.54 29.0 2.68e-01 74.4% 39.4%
3163957 881.1.1.38 a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF27161 0.54 41.0 3.73e-01 80.0% 63.5%
2099165 10.2.1.22 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Peptidase_A6 0.54 49.0 3.51e-01 99.2% 67.9%
3686933 331.3.1.0 a+b two layers › TBP-like › Bet v1-like › Bet v1-like 0.53 44.0 3.92e-01 88.0% 81.1%
3897413 11.1.1.17 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Transglut_C 0.53 40.0 4.12e-01 96.8% 86.1%
3506244 5084.1.1.16 beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like › Ail_Lom 0.53 38.0 3.48e-01 76.0% 97.7%
3518033 10.4.1.0 beta sandwiches › jelly-roll › Spermadhesin, CUB domain › Spermadhesin, CUB domain 0.52 42.0 4.40e-01 98.4% 98.2%
4568018 223.3.1.8 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase2 0.52 37.0 2.83e-01 73.6% 83.2%
3252050 12.3.1.0 beta sandwiches › Glycosyl hydrolase domain-like › supersandwich › supersandwich 0.51 43.0 3.69e-01 93.6% 85.2%
3236803 10.32.1.4 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › EMP24_GP25L 0.51 40.0 4.26e-01 99.2% 100.0%
4028561 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.51 46.0 4.19e-01 99.2% 93.9%
4557742 223.1.1.2 a+b three layers › Profilin-like › sensor domains › sensor domains › PAS 0.50 37.0 3.80e-01 76.0% 90.8%
4572271 223.3.1.3 a+b three layers › Profilin-like › a+b domain in beta-lactamase/transpeptidase-like proteins › a+b domain in beta-lactamase/transpeptidase-like proteins › Transpeptidase 0.50 38.0 3.07e-01 80.0% 92.2%