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OQ067477.1__WCD44236.1__Lumi_097__00097
Bact-VirOQ067477.1__WCD44236.1__Lumi_097__00097
Identity
- Accession:
- OQ067477 ↗
- Kingdom:
- phage
Quality
90.0
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-81
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4nv1E01 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.74 | 59.0 | 4.51e-01 | 86.3% | 89.8% |
| 5vyqA01 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.74 | 59.0 | 4.53e-01 | 86.3% | 89.3% |
| 5uaiA01 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.74 | 58.0 | 4.28e-01 | 85.0% | 88.3% |
| 5es6A01 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.73 | 58.0 | 4.39e-01 | 86.3% | 77.4% |
| 2ywrA00 | 3.40.50.170 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Formyl transferase, N-terminal domain | 0.71 | 55.0 | 4.05e-01 | 85.0% | 84.7% |
| 5kolD00 | 3.90.950.20 | Alpha Beta › Alpha-Beta Complex › Maf protein › CinA-like | 0.64 | 54.0 | 4.19e-01 | 92.5% | 89.5% |
| 4pqgA03 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.60 | 46.0 | 3.60e-01 | 82.5% | 87.9% |
| 4ddpA00 | 1.10.418.40 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Autophagy protein 6/Beclin 1 | 0.59 | 50.0 | 3.80e-01 | 93.8% | 96.9% |
| 2a6hF01 | 1.20.120.1810 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.59 | 40.0 | 3.12e-01 | 93.8% | 31.1% |
| 3mixA01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.58 | 41.0 | 3.64e-01 | 75.0% | 57.5% |
| 7d27A02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.58 | 47.0 | 3.45e-01 | 91.3% | 90.4% |
| 4bucA02 | 3.40.1190.10 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Mur-like, catalytic domain | 0.57 | 47.0 | 3.52e-01 | 91.3% | 83.8% |
| 3v9pB00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 44.0 | 3.35e-01 | 90.0% | 93.1% |
| 1jx4A04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.54 | 43.0 | 4.04e-01 | 88.7% | 76.5% |
| 2x49A01 | 3.40.30.60 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › FHIPEP family, domain 1 | 0.54 | 42.0 | 4.05e-01 | 88.7% | 100.0% |
| 3ohsX02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.53 | 43.0 | 3.20e-01 | 88.7% | 80.0% |
| 3edyA02 | 3.40.50.200 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Peptidase S8/S53 domain | 0.51 | 41.0 | 2.74e-01 | 91.3% | 75.7% |
| 3gzfD00 | 1.10.150.420 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Coronavirus nonstructural protein 4 C-terminus | 0.51 | 39.0 | 3.77e-01 | 81.2% | 84.6% |
| 3t5tB01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.50 | 41.0 | 2.90e-01 | 93.8% | 72.5% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4362432 | 7571.1.1.1 ↗ | a/b three-layered sandwiches › Formyltransferase › Formyltransferase › Formyltransferase › Formyl_trans_N | 0.76 | 60.0 | 4.37e-01 | 85.0% | 88.4% |
| 3444496 | 7571.1.1.1 ↗ | a/b three-layered sandwiches › Formyltransferase › Formyltransferase › Formyltransferase › Formyl_trans_N | 0.76 | 61.0 | 4.36e-01 | 86.3% | 85.8% |
| 4938067 | 7571.1.1.1 ↗ | a/b three-layered sandwiches › Formyltransferase › Formyltransferase › Formyltransferase › Formyl_trans_N | 0.75 | 60.0 | 4.63e-01 | 85.0% | 87.1% |
| 1503117 | 7571.1.1.1 ↗ | a/b three-layered sandwiches › Formyltransferase › Formyltransferase › Formyltransferase › Formyl_trans_N | 0.73 | 58.0 | 4.51e-01 | 86.3% | 89.7% |
| 4884395 | 7571.1.1.1 ↗ | a/b three-layered sandwiches › Formyltransferase › Formyltransferase › Formyltransferase › Formyl_trans_N | 0.72 | 57.0 | 4.45e-01 | 86.3% | 85.5% |
| 3359774 | 330.1.1.3 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like › Dicer_dimer | 0.71 | 53.0 | 4.82e-01 | 78.8% | 72.4% |
| 2568550 | 7571.1.1.1 ↗ | a/b three-layered sandwiches › Formyltransferase › Formyltransferase › Formyltransferase › Formyl_trans_N | 0.67 | 57.0 | 4.31e-01 | 93.8% | 82.1% |
| 2875150 | 3232.1.1.1 ↗ | alpha arrays › PB2 '627' domain-related › PB2 '627' domain-related › Polymerase basic protein 2 (PB2) '627' domain | 0.65 | 42.0 | 3.18e-01 | 70.0% | 27.3% |
| 3719412 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.64 | 38.0 | 3.32e-01 | 98.8% | 39.2% |
| 3209694 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.62 | 55.0 | 5.15e-01 | 98.8% | 90.0% |
| 3519032 | 330.1.1.0 ↗ | a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like | 0.62 | 55.0 | 5.16e-01 | 100.0% | 84.0% |
| 3610952 | 171.1.1.0 ↗ | alpha arrays › RNase III catalytic domain-like › RNase III catalytic domain-like › RNase III catalytic domain-like | 0.61 | 42.0 | 3.63e-01 | 72.5% | 60.8% |
| 4935256 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.59 | 47.0 | 3.34e-01 | 90.0% | 87.6% |
| 4205955 | 2004.1.1.159 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M | 0.59 | 41.0 | 3.11e-01 | 72.5% | 84.0% |
| 3699987 | 198.3.1.0 ↗ | alpha arrays › Saposin-like › PAS factor › PAS factor | 0.59 | 44.0 | 3.94e-01 | 81.2% | 96.5% |
| 4949084 | 328.6.1.2 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › RTC | 0.58 | 44.0 | 2.97e-01 | 83.7% | 29.0% |
| 3799246 | 3409.1.1.1 ↗ | a+b duplicates or obligate multimers › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › Vacuolar protein sorting-associated protein 30 BARA domain › APG6 | 0.57 | 48.0 | 3.66e-01 | 92.5% | 69.7% |
| 3233260 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.54 | 37.0 | 2.26e-01 | 70.0% | 61.6% |
| 3620317 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.54 | 44.0 | 2.78e-01 | 90.0% | 90.5% |
| 3964369 | 6108.1.1.8 ↗ | alpha bundles › Middle and GTPase effector domains in dynamin-related proteins › Middle and GTPase effector domains in dynamin-related proteins › Middle and GTPase effector domains in dynamin-related proteins › Phage_Mu_F | 0.53 | 43.0 | 3.04e-01 | 90.0% | 68.0% |
| 3987959 | 4097.1.1.1 ↗ | a+b two layers › Lp2179-like › Lp2179-like › Lp2179-like › DUF1831 | 0.51 | 42.0 | 3.72e-01 | 90.0% | 98.3% |