Back to structures

OQ067477.1__WCD44242.1__Lumi_103__00103

Bact-Vir

OQ067477.1__WCD44242.1__Lumi_103__00103

Identity

Accession:
OQ067477 ↗
Kingdom:
phage

Quality

65.9 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-66
PDB
Domain cluster: representative
CATH (5)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4ijdA02 3.30.160.60 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger 0.55 26.0 3.26e-01 84.6% 83.9%
1e88A03 2.10.70.10 Mainly Beta › Ribbon › Complement Module; domain 1 › Complement Module, domain 1 0.54 28.0 3.29e-01 83.1% 69.0%
5mxpA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.54 41.0 2.72e-01 84.6% 65.3%
1k4yA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.53 41.0 2.51e-01 89.2% 37.3%
3rmqA01 2.30.30.990 Mainly Beta › Roll › SH3 type barrels. › Malonyl-[acyl-carrier protein] O-methyltransferase, zinc-finger motif 0.52 34.0 3.64e-01 87.7% 81.5%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3590421 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.60 31.0 3.85e-01 92.3% 88.6%
4422251 4.1.1.98 beta barrels › SH3 › SH3 › SH3 › ProQ_C 0.60 37.0 4.05e-01 98.5% 80.0%
4989647 375.1.1.19 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD 0.57 35.0 3.81e-01 100.0% 74.5%
5028075 1.1.3.0 beta barrels › cradle loop barrel › RIFT-related › AbrB 0.53 33.0 3.56e-01 92.3% 82.0%
4194516 601.23.1.0 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III 0.52 41.0 2.77e-01 90.8% 25.9%