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OQ067478.1__WCD44295.1__Tiera_039__00038
Bact-VirOQ067478.1__WCD44295.1__Tiera_039__00038
Identity
- Accession:
- OQ067478 ↗
- Kingdom:
- phage
Quality
64.3
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 47-101
Domain cluster:
representative
CATH (28)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3t46A00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.77 | 66.0 | 5.96e-01 | 96.4% | 82.7% |
| 3okqA00 | 1.20.58.1540 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Actin interacting protein 3, C-terminal domain | 0.75 | 52.0 | 3.97e-01 | 72.7% | 33.6% |
| 3i2fA02 | 1.10.3020.10 | Mainly Alpha › Orthogonal Bundle › alpha-amino acid ester hydrolase ( Helical cap domain) › alpha-amino acid ester hydrolase ( Helical cap domain) | 0.74 | 64.0 | 5.27e-01 | 94.5% | 62.1% |
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.74 | 63.0 | 5.62e-01 | 96.4% | 91.1% |
| 1lq7A00 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.69 | 58.0 | 5.50e-01 | 98.2% | 95.5% |
| 2qsbA00 | 1.20.1440.50 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › Ta0600-like | 0.68 | 58.0 | 5.04e-01 | 96.4% | 80.0% |
| 3ousA00 | 1.10.287.70 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › | 0.66 | 44.0 | 3.97e-01 | 70.9% | 92.7% |
| 2wl8C00 | 1.20.120.900 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Pex19, mPTS binding domain | 0.66 | 58.0 | 4.66e-01 | 100.0% | 78.9% |
| 2au5A00 | 1.20.120.590 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › EF2947-like | 0.64 | 52.0 | 4.09e-01 | 96.4% | 79.1% |
| 1t9kA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.62 | 46.0 | 3.54e-01 | 83.6% | 44.3% |
| 1or7B01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.61 | 41.0 | 3.52e-01 | 70.9% | 81.9% |
| 4jcyA00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 53.0 | 4.48e-01 | 100.0% | 85.9% |
| 3fyaB00 | 1.10.260.40 | Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains | 0.60 | 50.0 | 4.60e-01 | 100.0% | 79.2% |
| 3b9qA01 | 1.20.120.140 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › SRP54, nucleotide-binding domain | 0.60 | 46.0 | 3.98e-01 | 83.6% | 64.0% |
| 2pkeA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.60 | 42.0 | 3.83e-01 | 76.4% | 93.6% |
| 6i2mB02 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.59 | 39.0 | 3.17e-01 | 70.9% | 36.9% |
| 1bwoA00 | 1.10.110.10 | Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins | 0.58 | 39.0 | 3.45e-01 | 72.7% | 43.3% |
| 1miwA04 | 1.10.246.80 | Mainly Alpha › Orthogonal Bundle › Serum Albumin; Chain A, Domain 1 › | 0.57 | 41.0 | 3.95e-01 | 76.4% | 78.1% |
| 1f5oA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.57 | 48.0 | 3.61e-01 | 100.0% | 75.8% |
| 7dkaA01 | 3.40.30.10 | Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin | 0.57 | 46.0 | 3.28e-01 | 96.4% | 31.3% |
| 2janA02 | 1.10.240.10 | Mainly Alpha › Orthogonal Bundle › Tyrosyl-Transfer RNA Synthetase › Tyrosyl-Transfer RNA Synthetase | 0.56 | 43.0 | 3.66e-01 | 96.4% | 48.5% |
| 3a06B03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.55 | 43.0 | 3.70e-01 | 85.5% | 62.5% |
| 7qaqA01 | 3.40.50.11710 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Cyclodipeptide synthase | 0.53 | 45.0 | 3.11e-01 | 100.0% | 45.5% |
| 3e0zA00 | 1.20.58.1400 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Domain of unknown function DUF3837 | 0.53 | 41.0 | 3.42e-01 | 89.1% | 45.8% |
| 3kdgA02 | 3.30.1370.100 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › MutL, C-terminal domain, regulatory subdomain | 0.52 | 46.0 | 3.88e-01 | 100.0% | 67.0% |
| 3tviA01 | 3.40.1160.10 | Alpha Beta › 3-Layer(aba) Sandwich › Carbamate kinase › Acetylglutamate kinase-like | 0.52 | 42.0 | 2.81e-01 | 98.2% | 24.8% |
| 2zs0A00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.51 | 43.0 | 3.30e-01 | 100.0% | 60.0% |
| 2nrlA00 | 1.10.490.10 | Mainly Alpha › Orthogonal Bundle › Globin-like › Globins | 0.50 | 44.0 | 3.26e-01 | 100.0% | 60.0% |
ECOD (45)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4943264 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.82 | 72.0 | 6.54e-01 | 100.0% | 85.3% |
| 3928688 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.81 | 67.0 | 6.35e-01 | 89.1% | 81.5% |
| 5017110 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.78 | 69.0 | 6.13e-01 | 100.0% | 98.8% |
| 5022936 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.75 | 65.0 | 5.16e-01 | 96.4% | 90.0% |
| 4940510 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.74 | 63.0 | 4.94e-01 | 100.0% | 69.6% |
| 5048286 | 601.7.1.34 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › DUF4129 | 0.74 | 63.0 | 5.07e-01 | 100.0% | 71.1% |
| 4928468 | 633.12.1.1 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 | 0.73 | 62.0 | 5.30e-01 | 94.5% | 76.4% |
| 4955523 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.73 | 62.0 | 4.99e-01 | 100.0% | 81.7% |
| 5060264 | 7579.1.1.0 ↗ | a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases | 0.72 | 60.0 | 3.76e-01 | 96.4% | 17.2% |
| 5001990 | 4044.1.1.1 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane | 0.72 | 62.0 | 4.83e-01 | 100.0% | 66.4% |
| 4959236 | 601.7.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain | 0.72 | 61.0 | 5.49e-01 | 98.2% | 100.0% |
| 3731867 | 3758.1.1.34 ↗ | alpha bundles › Bacterial hemolysins-like › Bacterial hemolysins › Bacterial hemolysins › AIP3 | 0.72 | 50.0 | 3.18e-01 | 72.7% | 15.0% |
| 5054723 | 633.12.1.1 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like › UPF0147 | 0.72 | 61.0 | 5.35e-01 | 96.4% | 78.6% |
| 3737907 | 192.29.1.153 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › AIP3 | 0.71 | 50.0 | 3.44e-01 | 70.9% | 22.2% |
| 3984588 | 4044.1.1.1 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane | 0.71 | 60.0 | 4.61e-01 | 100.0% | 61.5% |
| 4391428 | 4044.1.1.1 ↗ | alpha bundles › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Helical bundle domain in prismane-like proteins › Prismane | 0.68 | 58.0 | 4.43e-01 | 100.0% | 57.0% |
| 5048701 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.68 | 56.0 | 4.89e-01 | 94.5% | 78.8% |
| 5061319 | 632.11.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › AF1782-like › AF1782-like | 0.67 | 55.0 | 4.49e-01 | 98.2% | 90.4% |
| 3761824 | 101.1.1.21 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_Tc5 | 0.66 | 38.0 | 3.52e-01 | 98.2% | 44.3% |
| 4121992 | 601.7.1.48 ↗ | alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › PF29375 | 0.66 | 55.0 | 4.54e-01 | 100.0% | 76.4% |
| 5052505 | 5059.1.1.1 ↗ | alpha bundles › Drug/Metabolite transporter › Drug/Metabolite transporter › Drug/Metabolite transporter › EamA | 0.65 | 44.0 | 3.84e-01 | 74.5% | 45.9% |
| 5053994 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.64 | 54.0 | 4.97e-01 | 98.2% | 89.3% |
| 4026195 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.62 | 42.0 | 3.75e-01 | 70.9% | 78.7% |
| 3601795 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.61 | 44.0 | 3.26e-01 | 76.4% | 50.3% |
| 3385184 | 632.13.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like | 0.61 | 49.0 | 4.74e-01 | 94.5% | 90.8% |
| 3597591 | 1128.1.1.0 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein | 0.61 | 53.0 | 4.93e-01 | 100.0% | 82.9% |
| 3995302 | 5.1.4.158 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_HPS5 | 0.61 | 41.0 | 2.46e-01 | 70.9% | 9.4% |
| 4469694 | 304.48.1.0 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like | 0.60 | 46.0 | 2.87e-01 | 85.5% | 25.9% |
| 3199446 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.60 | 48.0 | 4.17e-01 | 98.2% | 92.0% |
| 3600264 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.60 | 41.0 | 2.49e-01 | 72.7% | 19.0% |
| 4475717 | 2498.1.1.22 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY | 0.60 | 43.0 | 3.09e-01 | 78.2% | 49.4% |
| 5030767 | 103.5.1.0 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like | 0.59 | 42.0 | 4.08e-01 | 74.5% | 86.7% |
| 4047887 | 2498.1.1.22 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY | 0.59 | 42.0 | 3.02e-01 | 76.4% | 47.1% |
| 3437969 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.59 | 49.0 | 4.41e-01 | 100.0% | 85.5% |
| 3962358 | 2485.1.1.58 ↗ | a+b three layers › Thioredoxin-like › Thioredoxin-like › Thioredoxin-like › Rv2466c-like | 0.57 | 46.0 | 3.24e-01 | 92.7% | 81.1% |
| 2754881 | 1128.1.1.1 ↗ | alpha bundles › LYR protein › LYR protein › LYR protein › Complex1_LYR | 0.56 | 45.0 | 4.27e-01 | 96.4% | 87.0% |
| 4926814 | 7513.1.1.1 ↗ | a/b three-layered sandwiches › CofD-like › CofD-like › CofD-like › CofD | 0.56 | 48.0 | 2.99e-01 | 96.4% | 37.8% |
| 3519127 | 4979.2.1.1 ↗ | alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) › XTBD | 0.56 | 39.0 | 3.63e-01 | 80.0% | 57.5% |
| 3486635 | 4979.2.1.1 ↗ | alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) › XTBD | 0.55 | 41.0 | 3.94e-01 | 85.5% | 70.8% |
| 3789663 | 4979.2.1.0 ↗ | alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) | 0.55 | 39.0 | 3.71e-01 | 80.0% | 65.7% |
| 3545841 | 3694.1.1.1 ↗ | alpha bundles › Tail specific protease helical domain › Tail specific protease helical domain › Tail specific protease helical domain › Peptidase_S41_N | 0.55 | 45.0 | 4.24e-01 | 96.4% | 90.0% |
| 3958582 | 101.1.1.282 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › DUF222 | 0.53 | 45.0 | 3.34e-01 | 96.4% | 59.3% |
| 4648382 | 2498.1.1.22 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › YbeY | 0.53 | 39.0 | 2.87e-01 | 78.2% | 77.9% |
| 1731087 | 4979.2.1.1 ↗ | alpha arrays › C-terminal domain of Hypothetical protein MPN330-like › XRN2-binding domain (XTBD) › XRN2-binding domain (XTBD) › XTBD | 0.53 | 39.0 | 3.68e-01 | 85.5% | 63.0% |
| 5024540 | 2498.1.1.0 ↗ | mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" | 0.50 | 42.0 | 3.20e-01 | 100.0% | 96.6% |