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OQ076693.1__WBM23522.1__X__00108

Bact-Vir

OQ076693.1__WBM23522.1__X__00108

Identity

Accession:
OQ076693 ↗
Kingdom:
phage

Quality

95.4 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pantevenvirales› Straboviridae› Mosigvirus› Escherichia_phage_PNJ-6

TaxID: 3017168

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 26-83
PDB
Domain cluster: rep: hypothetical_protein_BNJ_00240__YP_009352648__Kaumoebavirus_Viruses.__X__D235-295
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3m7kA00 3.30.40.220 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › 0.80 71.0 5.32e-01 100.0% 51.4%
5feyA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.69 40.0 3.66e-01 74.1% 42.3%
1z2qA00 3.30.40.10 Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) 0.68 48.0 4.21e-01 94.8% 51.2%
1e7lA01 3.40.1800.10 Alpha Beta › 3-Layer(aba) Sandwich › His-Me finger endonuclease fold › His-Me finger endonucleases 0.62 52.0 4.75e-01 96.6% 78.8%
1m08A00 3.90.540.10 Alpha Beta › Alpha-Beta Complex › Colicin E7 immunity protein; Chain B, fragment: Endonuclease domain › Colicin/pyocin, DNase domain 0.57 49.0 3.82e-01 100.0% 94.7%
2xzmZ00 3.30.1230.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 0.53 37.0 3.22e-01 75.9% 49.5%
3j7aZ00 3.30.1230.20 Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › Ribosomal protein S21 0.52 36.0 3.48e-01 75.9% 65.3%
ECOD (25)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3249964 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.82 69.0 6.14e-01 91.4% 78.8%
119462 378.1.1.0 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases 0.80 71.0 5.30e-01 100.0% 51.4%
3489563 376.1.2.25 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › FYVE 0.77 48.0 4.77e-01 79.3% 61.7%
3302251 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.76 44.0 3.96e-01 74.1% 42.5%
3797752 376.1.3.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger 0.74 50.0 4.60e-01 93.1% 54.7%
3566406 376.1.1.27 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 0.74 43.0 3.65e-01 74.1% 35.8%
3855533 376.1.1.20 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_UBOX 0.74 43.0 3.88e-01 74.1% 42.5%
3739083 376.1.3.3 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › FYVE 0.73 53.0 4.82e-01 98.3% 58.7%
3384487 376.1.1.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 0.73 43.0 4.04e-01 74.1% 48.6%
3925306 376.1.1.0 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.72 44.0 4.04e-01 79.3% 48.0%
3224089 376.1.2.21 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › LIM 0.63 44.0 4.32e-01 86.2% 66.2%
3394482 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.62 37.0 4.20e-01 74.1% 85.0%
8235 378.1.1.3 ↗ few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › Endonuclease_7 0.62 52.0 4.37e-01 96.6% 61.2%
3487873 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.61 43.0 4.29e-01 74.1% 85.0%
3672256 376.1.3.24 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › NSD_PHD 0.58 46.0 3.62e-01 84.5% 62.6%
5066586 377.1.1.0 ↗ few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like 0.57 37.0 3.94e-01 75.9% 80.0%
4833007 3167.1.1.1 ↗ a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › Ribosomal_S21e 0.57 40.0 3.53e-01 75.9% 54.5%
2831825 3167.1.1.1 ↗ a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › Ribosomal_S21e 0.55 39.0 3.77e-01 75.9% 70.6%
3229165 3167.1.1.1 ↗ a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › Ribosomal_S21e 0.54 38.0 3.40e-01 75.9% 56.8%
3599253 3167.1.1.0 ↗ a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) 0.53 37.0 3.45e-01 75.9% 60.0%
2673846 3167.1.1.1 ↗ a+b two layers › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › 40S ribosomal protein rpS21 (S21e) › Ribosomal_S21e 0.53 37.0 3.41e-01 75.9% 57.8%
5034704 7575.1.1.2 ↗ a/b three-layered sandwiches › Caspase-like › Caspase-like › Caspase-like › Peptidase_C25 0.52 37.0 2.54e-01 77.6% 99.6%
3624321 304.48.1.1 ↗ a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_1 0.51 38.0 2.90e-01 86.2% 68.5%
2322754 376.1.2.3 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_4 0.50 41.0 3.84e-01 100.0% 71.6%
3505818 394.1.1.1 ↗ few secondary structure elements › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › Invertebrate chitin-binding proteins › CBM_14 0.50 32.0 3.35e-01 93.1% 68.5%