←Back to structures
OQ079154.1__WCD55600.1__BAYBAE_20__00020
Bact-VirOQ079154.1__WCD55600.1__BAYBAE_20__00020
Identity
- Accession:
- OQ079154 ↗
- Kingdom:
- phage
Quality
80.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 39-111
Domain cluster:
representative
CATH (29)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7wd3A04 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.68 | 59.0 | 5.80e-01 | 100.0% | 92.3% |
| 2oezA02 | 1.10.3900.10 | Mainly Alpha › Orthogonal Bundle › YacF-like › YacF-like | 0.67 | 49.0 | 3.81e-01 | 78.1% | 76.7% |
| 2fnaA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.66 | 48.0 | 4.78e-01 | 100.0% | 75.0% |
| 2shpB03 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.66 | 49.0 | 3.30e-01 | 79.5% | 89.9% |
| 3whkA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.65 | 53.0 | 5.38e-01 | 100.0% | 95.8% |
| 5ubvA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.63 | 52.0 | 5.25e-01 | 100.0% | 98.6% |
| 2x5fA01 | 3.40.640.10 | Alpha Beta › 3-Layer(aba) Sandwich › Aspartate Aminotransferase; domain 2 › Type I PLP-dependent aspartate aminotransferase-like (Major domain) | 0.63 | 48.0 | 3.14e-01 | 82.2% | 62.5% |
| 2lwxA00 | 1.10.8.840 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ribosome-associated complex head domain | 0.62 | 51.0 | 4.84e-01 | 95.9% | 76.1% |
| 2x8aA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.62 | 52.0 | 5.10e-01 | 100.0% | 93.8% |
| 4chdA00 | 3.30.70.3510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.61 | 45.0 | 3.65e-01 | 78.1% | 59.3% |
| 1sxjE03 | 1.20.272.10 | Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 › | 0.59 | 41.0 | 3.76e-01 | 72.6% | 100.0% |
| 2z1qB04 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.58 | 43.0 | 3.51e-01 | 79.5% | 64.0% |
| 7r97A01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.58 | 41.0 | 3.42e-01 | 79.5% | 73.0% |
| 3ay5A02 | 1.20.1410.10 | Mainly Alpha › Up-down Bundle › I/LWEQ domain › I/LWEQ domain | 0.57 | 51.0 | 3.93e-01 | 100.0% | 73.9% |
| 3piwA00 | 1.20.1250.10 | Mainly Alpha › Up-down Bundle › Growth Hormone; Chain: A; › | 0.57 | 48.0 | 3.82e-01 | 95.9% | 94.2% |
| 2lm4A01 | 1.10.150.250 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Flavinator of succinate dehydrogenase | 0.56 | 47.0 | 4.46e-01 | 95.9% | 87.0% |
| 4m0mA04 | 1.20.1270.440 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.56 | 42.0 | 3.63e-01 | 80.8% | 80.3% |
| 4hfvA01 | 1.20.1440.330 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.56 | 42.0 | 3.62e-01 | 80.8% | 77.8% |
| 4oogC01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.56 | 42.0 | 3.36e-01 | 84.9% | 67.3% |
| 7f16R01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 45.0 | 3.07e-01 | 90.4% | 51.3% |
| 3buxB01 | 1.20.930.20 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Adaptor protein Cbl, N-terminal domain | 0.55 | 46.0 | 3.90e-01 | 95.9% | 81.4% |
| 1j1vA00 | 1.10.1750.10 | Mainly Alpha › Orthogonal Bundle › Chromosomal Replication Initiator Protein Dnaa; Chain: A; › DnaA protein, C-terminal DNA-binding domain | 0.54 | 41.0 | 3.78e-01 | 82.2% | 88.3% |
| 3k7yA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.53 | 41.0 | 3.41e-01 | 84.9% | 63.4% |
| 4rocA01 | 1.10.472.10 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Cyclin-like | 0.53 | 46.0 | 4.17e-01 | 100.0% | 89.3% |
| 2g8lB01 | 1.10.8.380 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Uncharacterised protein PF01937, DUF89, domain 1 | 0.52 | 39.0 | 4.10e-01 | 82.2% | 91.0% |
| 2igpA00 | 1.10.418.30 | Mainly Alpha › Orthogonal Bundle › Actin-binding Protein, T-fimbrin; domain 1 › Ncd80 complex, Ncd80 subunit | 0.52 | 38.0 | 3.34e-01 | 78.1% | 93.0% |
| 6zhiB02 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.51 | 37.0 | 3.58e-01 | 76.7% | 84.3% |
| 2kmfA01 | 1.20.58.810 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Photosystem II Pbs27 | 0.50 | 44.0 | 3.95e-01 | 97.3% | 88.2% |
| 2qffA00 | 1.20.1270.10 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.50 | 38.0 | 3.83e-01 | 80.8% | 91.9% |
ECOD (21)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3737414 | 148.1.3.206 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › PF31015 | 0.70 | 61.0 | 5.78e-01 | 100.0% | 95.6% |
| 4392993 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.68 | 55.0 | 5.49e-01 | 100.0% | 89.3% |
| 5059356 | 159.1.2.0 ↗ | alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › MazG-related | 0.67 | 58.0 | 5.05e-01 | 100.0% | 84.7% |
| 5030441 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.67 | 53.0 | 5.14e-01 | 100.0% | 77.6% |
| 4588066 | 103.5.1.0 ↗ | alpha arrays › RuvA-C › post-HMGL domain-like › post-HMGL domain-like | 0.66 | 45.0 | 4.97e-01 | 95.9% | 92.7% |
| 3376301 | 3361.1.1.0 ↗ | alpha bundles › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 › C-terminal Pdr1-activating domain of J-protein Zuo1 | 0.66 | 52.0 | 5.49e-01 | 94.5% | 95.4% |
| 5047378 | 316.1.1.0 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase | 0.65 | 55.0 | 4.20e-01 | 94.5% | 77.1% |
| 4989650 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.65 | 55.0 | 5.22e-01 | 100.0% | 81.1% |
| 3961186 | 103.9.1.0 ↗ | alpha arrays › RuvA-C › RanGAP2 N-terminal domain › RanGAP2 N-terminal domain | 0.63 | 45.0 | 4.12e-01 | 76.7% | 98.0% |
| 3305472 | 148.1.3.19 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › AAA_lid_3 | 0.62 | 51.0 | 4.80e-01 | 100.0% | 74.7% |
| 5043880 | 605.4.1.0 ↗ | alpha duplicates or obligate multimers › ROP-like › ROP protein › ROP protein | 0.59 | 44.0 | 4.22e-01 | 82.2% | 94.1% |
| 4311944 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.58 | 39.0 | 3.88e-01 | 91.8% | 66.7% |
| 4109614 | 1.1.9.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › LON_substr_bdg | 0.56 | 41.0 | 3.05e-01 | 80.8% | 39.0% |
| 4224258 | 2003.1.2.15 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › FAD_binding_3 | 0.55 | 45.0 | 2.89e-01 | 93.2% | 95.2% |
| 3870886 | 110.1.1.11 ↗ | alpha arrays › DEATH domain › DEATH domain › DEATH domain › HSR | 0.54 | 41.0 | 3.62e-01 | 82.2% | 79.1% |
| 4538846 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.54 | 40.0 | 3.84e-01 | 79.5% | 77.6% |
| 4994150 | 632.18.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › hypothetical protein PA2901 › hypothetical protein PA2901 | 0.54 | 40.0 | 3.70e-01 | 79.5% | 84.2% |
| 4542067 | 1101.1.1.5 ↗ | alpha bundles › Uncharacterized protein LPG2271 › Uncharacterized protein LPG2271 › Uncharacterized protein LPG2271 › PF27081 | 0.54 | 45.0 | 4.03e-01 | 95.9% | 93.3% |
| 3590682 | 138.1.1.5 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_gamma3 | 0.51 | 40.0 | 3.14e-01 | 83.6% | 52.3% |
| 3510536 | 138.1.1.5 ↗ | alpha arrays › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA polymerase III clamp loader subunits, C-terminal domain › DNA_pol3_gamma3 | 0.51 | 39.0 | 3.35e-01 | 83.6% | 63.3% |
| 3334749 | 544.1.1.0 ↗ | alpha bundles › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 › Functional domain of the splicing factor Prp18 | 0.51 | 42.0 | 3.44e-01 | 93.2% | 92.9% |
D2
medium
residues 192-221