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OQ101249.1__WDS61424.1__Acba4_060__00025

Bact-Vir

OQ101249.1__WDS61424.1__Acba4_060__00025

Identity

Accession:
OQ101249 ↗
Kingdom:
phage

Quality

75.6 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Acinetobacter_phage_Acba_4

TaxID: 3024173

Cluster

View cluster (4 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 4-74
PDB
Domain cluster: rep: CAKLQF020000006.1__CAH1079886.1__SAMEA5780031_01424__00067__D2-71
CATH (27)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3zpeA00 2.60.90.50 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › 0.69 45.0 3.63e-01 100.0% 34.8%
2m4vA00 2.20.28.270 Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › RNA polymerase-binding protein A 0.68 40.0 3.86e-01 100.0% 51.2%
2v4dE01 2.40.420.20 Mainly Beta › Beta Barrel › conserved putative lor/sdh protein from methanococcus maripaludis s2 fold › 0.67 40.0 3.84e-01 98.6% 50.0%
1mrzB02 2.40.30.30 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Riboflavin kinase-like 0.67 42.0 3.64e-01 100.0% 41.1%
3h51A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.64 42.0 3.36e-01 70.4% 33.1%
1ylnA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.64 45.0 3.87e-01 100.0% 46.5%
4r9iA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.62 36.0 3.21e-01 100.0% 39.0%
3nqzA02 3.10.450.40 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 37.0 3.58e-01 80.3% 52.4%
2zuoA10 3.30.479.30 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain 0.56 46.0 3.95e-01 90.1% 97.4%
1uzxA00 3.10.110.10 Alpha Beta › Roll › Ubiquitin Conjugating Enzyme › Ubiquitin Conjugating Enzyme 0.56 44.0 3.48e-01 83.1% 50.0%
7xgtA01 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.55 48.0 3.31e-01 98.6% 42.1%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.55 39.0 3.55e-01 100.0% 52.9%
4zciA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.55 42.0 3.73e-01 100.0% 57.4%
2veoA01 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.55 47.0 3.09e-01 100.0% 32.3%
4lduA03 2.30.30.1040 Mainly Beta › Roll › SH3 type barrels. › 0.54 42.0 4.30e-01 100.0% 91.2%
2h7aA01 3.10.510.20 Alpha Beta › Roll › NE1680-like fold › YcgL domain 0.54 32.0 3.20e-01 98.6% 53.9%
3b5mA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.54 48.0 4.04e-01 100.0% 65.5%
3oe3C00 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.54 47.0 4.44e-01 100.0% 98.9%
1h7zA00 2.60.90.10 Mainly Beta › Sandwich › Adenovirus Type 5 Fiber Protein (Receptor Binding Domain) › Adenovirus pIV-related, attachment domain 0.53 39.0 2.98e-01 100.0% 30.4%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.53 48.0 3.99e-01 100.0% 60.5%
3f6zB01 2.40.128.200 Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor 0.53 47.0 4.56e-01 100.0% 98.7%
1s68A02 3.30.470.30 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › DNA ligase/mRNA capping enzyme 0.52 46.0 3.98e-01 100.0% 94.7%
7c5wA01 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 38.0 3.14e-01 81.7% 97.3%
4jdeA01 2.60.40.3820 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 36.0 2.94e-01 73.2% 93.4%
5cmlA00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.51 44.0 3.10e-01 100.0% 36.3%
1ae2A00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 37.0 3.53e-01 80.3% 81.4%
4wksC02 2.30.120.10 Mainly Beta › Roll › Penicillin G acylase, beta-roll domain › Aminohydrolase, N-terminal nucleophile (Ntn) domain, beta-sheet knob region 0.50 40.0 3.99e-01 88.7% 88.0%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1146571 5092.1.1.8 ↗ beta sandwiches › Domain in virus attachment proteins › Domain in virus attachment proteins › Domain in virus attachment proteins › TAdV_Fibre-like_head 0.69 45.0 3.63e-01 100.0% 34.8%
5046101 2004.1.1.5 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ABC_tran 0.69 42.0 2.71e-01 95.8% 13.7%
3537881 277.1.1.1 ↗ a+b two layers › PX domain › PX domain › PX domain › PX 0.66 44.0 3.30e-01 78.9% 29.1%
None — 0.65 47.0 3.78e-01 88.7% 37.9%
4959378 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.65 39.0 3.44e-01 70.4% 40.0%
4629438 230.1.1.5 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.65 48.0 4.19e-01 80.3% 93.6%
4241460 301.1.1.2 ↗ a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 0.64 37.0 3.07e-01 100.0% 29.6%
5052270 12.1.1.0 ↗ beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain 0.63 41.0 3.80e-01 100.0% 50.5%
4193722 230.1.1.5 ↗ a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › GCHY-1 0.60 45.0 4.12e-01 80.3% 88.4%
3237970 11.1.1.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.59 40.0 3.41e-01 100.0% 40.0%
4033620 1.1.7.10 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Flavokinase 0.59 41.0 3.50e-01 100.0% 40.8%
3940850 11.1.4.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.59 38.0 3.76e-01 98.6% 61.3%
3596328 216.1.1.0 ↗ a+b two layers › UBC-like › UBC-like › UBC-like 0.59 39.0 3.04e-01 100.0% 28.8%
3595953 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 40.0 3.05e-01 76.1% 33.5%
3291599 7579.1.1.24 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › LIP 0.57 49.0 3.19e-01 100.0% 29.7%
3664016 4059.1.1.1 ↗ a+b complex topology › Serpins › Serpins › Serpins › Serpin 0.57 47.0 2.99e-01 90.1% 47.9%
5044223 10.1.2.0 ↗ beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) 0.56 41.0 3.78e-01 95.8% 58.0%
2389142 4059.1.1.0 ↗ a+b complex topology › Serpins › Serpins › Serpins 0.55 45.0 2.89e-01 91.5% 52.9%
2392667 9.11.1.3 ↗ beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › Nm-ACP 0.55 47.0 4.26e-01 100.0% 93.2%
3593803 264.2.1.0 ↗ beta barrels › LigT-like › Prokaryotic type I DNA topoisomerase beta-barrel domain › Prokaryotic type I DNA topoisomerase beta-barrel domain 0.55 48.0 3.62e-01 100.0% 90.0%
3599357 230.5.1.0 ↗ a+b two layers › T-fold › Band 7/SPFH domain › Band 7/SPFH domain 0.54 44.0 3.69e-01 88.7% 99.2%
3970821 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.54 41.0 3.64e-01 100.0% 55.2%
3818311 216.1.1.3 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UEV 0.54 41.0 3.17e-01 81.7% 47.5%
4927368 243.3.1.52 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › UPF0182 0.54 45.0 2.79e-01 100.0% 20.0%
3705552 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.54 39.0 3.03e-01 78.9% 46.1%
3889613 5.1.5.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.53 40.0 2.53e-01 83.1% 24.3%
169848 9.11.1.1 ↗ beta barrels › Lipocalins/Streptavidin › YdhA-like › YdhA-like › MliC 0.53 47.0 4.32e-01 100.0% 83.9%
3856806 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.53 43.0 2.55e-01 87.3% 16.4%
3250163 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 46.0 4.18e-01 100.0% 71.6%
3617912 214.1.1.0 ↗ a+b two layers › SH2 › SH2 › SH2 0.53 40.0 3.41e-01 83.1% 97.5%
3374629 59.1.1.11 ↗ beta complex topology › triple barrel › triple barrel › Rap30/74 interaction domains-like › Paf1 0.52 43.0 3.52e-01 91.5% 66.7%
3228158 220.1.1.66 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › SOS1_NGEF_PH 0.52 45.0 3.56e-01 95.8% 71.0%
3599937 330.1.1.0 ↗ a+b two layers › dsRBD-like › dsRNA-binding domain-like › dsRNA-binding domain-like 0.52 37.0 3.39e-01 77.5% 61.0%
4019866 7579.1.1.0 ↗ a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases 0.52 43.0 2.92e-01 100.0% 35.2%
4109774 11.1.5.0 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f 0.52 43.0 3.47e-01 100.0% 44.4%
3990561 11.1.1.955 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Fn3_Dep-1_4th 0.51 36.0 3.26e-01 98.6% 51.4%
3920627 192.18.1.0 ↗ alpha bundles › Long alpha-hairpin › MxiH-like › MxiH-like 0.51 37.0 2.32e-01 81.7% 84.0%
3184103 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.51 39.0 2.74e-01 87.3% 42.2%
3685401 4.1.1.20 ↗ beta barrels › SH3 › SH3 › SH3 › BAH 0.50 34.0 2.35e-01 71.8% 19.7%
3389863 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.50 43.0 3.67e-01 100.0% 76.8%
3993477 223.2.1.0 ↗ a+b three layers › Profilin-like › profilin-like › profilin-like 0.50 38.0 2.92e-01 87.3% 41.5%
376 2.1.1.20 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Phage_DNA_bind 0.50 36.0 3.48e-01 80.3% 80.5%