←Back to structures
OQ101250.1__WCF71541.1__Acba1_098__00029
Bact-VirOQ101250.1__WCF71541.1__Acba1_098__00029
Identity
- Accession:
- OQ101250 ↗
- Kingdom:
- phage
Quality
95.3
mean pLDDT
Taxonomy
TaxID: 3024174
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 84-217
Domain cluster:
rep: KP137437.1__AJA73289.1__1152AP2_04__00004__D65-98_134-211
CATH (30)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1u7gA00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.76 | 44.0 | 3.07e-01 | 100.0% | 19.8% |
| 3hd6A00 | 1.10.3430.10 | Mainly Alpha › Orthogonal Bundle › Ammonium transporter fold › Ammonium transporter AmtB like domains | 0.73 | 44.0 | 3.04e-01 | 100.0% | 19.6% |
| 3tp3A02 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.69 | 38.0 | 3.69e-01 | 90.3% | 48.0% |
| 2uv8A07 | 6.10.140.1410 | Special › Helix non-globular › Helix Hairpins › | 0.68 | 39.0 | 4.83e-01 | 83.6% | 89.4% |
| 4m70I00 | 1.20.5.4130 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.66 | 47.0 | 5.18e-01 | 97.8% | 89.8% |
| 1m6nA04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.66 | 44.0 | 4.40e-01 | 93.3% | 65.9% |
| 1c17M00 | 1.20.120.220 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › ATP synthase, F0 complex, subunit A | 0.66 | 44.0 | 4.32e-01 | 95.5% | 62.7% |
| 6xz3A01 | 1.20.120.230 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Alpha-catenin/vinculin-like | 0.63 | 38.0 | 4.05e-01 | 88.8% | 67.5% |
| 4l3uA00 | 1.20.1480.40 | Mainly Alpha › Up-down Bundle › hypothetical protein mp506/mpn330, domain 1 › Uncharacterised protein PF16133, DUF4844 | 0.62 | 36.0 | 3.77e-01 | 94.0% | 61.0% |
| 3vkgA15 | 1.10.8.1220 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.61 | 35.0 | 4.07e-01 | 97.0% | 78.7% |
| 1ek9A00 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.59 | 44.0 | 3.04e-01 | 76.9% | 26.4% |
| 1wp1B01 | 1.20.1600.10 | Mainly Alpha › Up-down Bundle › Outer membrane efflux proteins (OEP) › Outer membrane efflux proteins (OEP) | 0.58 | 50.0 | 3.59e-01 | 91.8% | 50.1% |
| 2zg6A02 | 1.10.150.660 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.58 | 26.0 | 3.39e-01 | 92.5% | 75.0% |
| 3oduB01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.57 | 43.0 | 3.40e-01 | 99.3% | 37.9% |
| 2jlnA00 | 1.10.4160.10 | Mainly Alpha › Orthogonal Bundle › Hydantoin permease › Hydantoin permease | 0.56 | 42.0 | 2.95e-01 | 78.4% | 70.6% |
| 2uxwA01 | 1.20.140.10 | Mainly Alpha › Up-down Bundle › Butyryl-CoA Dehydrogenase, subunit A; domain 3 › Butyryl-CoA Dehydrogenase, subunit A, domain 3 | 0.56 | 39.0 | 3.56e-01 | 94.0% | 51.6% |
| 3vkgA08 | 1.10.472.130 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Dynein motor, AAA2 domain, small subdomain | 0.56 | 40.0 | 3.83e-01 | 100.0% | 62.5% |
| 5z7qA00 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.56 | 40.0 | 3.61e-01 | 98.5% | 55.7% |
| 1avoB00 | 1.20.120.180 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Proteasome activator pa28, C-terminal domain | 0.56 | 48.0 | 4.81e-01 | 100.0% | 89.3% |
| 7xk2R01 | 1.20.1070.10 | Mainly Alpha › Up-down Bundle › Rhopdopsin 7-helix transmembrane proteins › Rhodopsin 7-helix transmembrane proteins | 0.55 | 40.0 | 3.24e-01 | 91.8% | 38.1% |
| 3qnmA02 | 1.10.150.240 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2 | 0.55 | 30.0 | 3.48e-01 | 93.3% | 74.4% |
| 4o5fA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 38.0 | 3.95e-01 | 95.5% | 74.8% |
| 1dn1B00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.54 | 41.0 | 3.52e-01 | 79.9% | 58.6% |
| 2qgsB01 | 1.10.472.50 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › HD-domain/PDEase-like | 0.54 | 31.0 | 3.77e-01 | 79.1% | 85.2% |
| 4iv6B01 | 1.10.540.10 | Mainly Alpha › Orthogonal Bundle › Butyryl-Coa Dehydrogenase, subunit A; domain 1 › Acyl-CoA dehydrogenase/oxidase, N-terminal domain | 0.53 | 26.0 | 2.86e-01 | 99.3% | 54.3% |
| 2v0oB00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.53 | 48.0 | 3.83e-01 | 100.0% | 76.0% |
| 6iknD01 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.53 | 48.0 | 3.84e-01 | 100.0% | 88.0% |
| 1o0wA01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.51 | 41.0 | 3.91e-01 | 99.3% | 73.4% |
| 7r97A01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.51 | 41.0 | 4.01e-01 | 100.0% | 77.7% |
| 4oogC01 | 1.10.1520.10 | Mainly Alpha › Orthogonal Bundle › Ribonuclease iii, N-terminal Endonuclease Domain; Chain A › Ribonuclease III domain | 0.51 | 41.0 | 3.87e-01 | 99.3% | 71.6% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4332680 | 3755.3.1.310 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › CemA | 0.77 | 44.0 | 4.24e-01 | 97.8% | 49.0% |
| 5081251 | 5076.2.1.18 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › DUF6159 | 0.70 | 56.0 | 4.44e-01 | 91.8% | 43.5% |
| 4982207 | 5076.2.1.18 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › DUF6159 | 0.69 | 50.0 | 4.14e-01 | 93.3% | 43.0% |
| 3461641 | 5076.2.1.0 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ | 0.69 | 60.0 | 5.16e-01 | 94.8% | 60.5% |
| 4411923 | 5045.1.1.1 ↗ | alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › ATP-synt_A | 0.69 | 51.0 | 4.37e-01 | 100.0% | 48.6% |
| 3414852 | 3567.1.1.0 ↗ | a+b duplicates or obligate multimers › MPER trimer › MPER trimer › MPER trimer | 0.68 | 43.0 | 4.45e-01 | 100.0% | 66.2% |
| 3593791 | 3069.1.1.0 ↗ | alpha arrays › BART › BART › BART | 0.67 | 36.0 | 3.57e-01 | 73.1% | 47.6% |
| 4026128 | 3871.1.1.1 ↗ | alpha duplicates or obligate multimers › PHIST › PHIST › PHIST › PRESAN | 0.66 | 53.0 | 5.10e-01 | 95.5% | 75.3% |
| 3254024 | 174.1.1.0 ↗ | few secondary structure elements › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain › Tetraspanin transmembrane domain | 0.65 | 45.0 | 4.20e-01 | 70.9% | 94.1% |
| 1282318 | 5076.2.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › EI24 | 0.64 | 47.0 | 3.92e-01 | 94.0% | 44.2% |
| 2773631 | 5045.1.1.1 ↗ | alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › ATP-synt_A | 0.64 | 51.0 | 4.49e-01 | 84.3% | 93.8% |
| 3696717 | 604.1.1.0 ↗ | alpha bundles › Spectrin repeat-like › Spectrin repeat › Spectrin repeat | 0.62 | 47.0 | 4.19e-01 | 79.9% | 61.1% |
| 3718891 | 5050.1.1.1 ↗ | alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Sugar_tr | 0.60 | 39.0 | 3.79e-01 | 88.1% | 56.8% |
| 5059074 | 5076.2.1.18 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Putative sulfate permease CysZ › Putative sulfate permease CysZ › DUF6159 | 0.60 | 51.0 | 4.30e-01 | 93.3% | 55.5% |
| 3366503 | 5074.1.1.10 ↗ | extended segments › Bacterial light-harvesting complex subunits › Bacterial light-harvesting complex subunits › Bacterial light-harvesting complex subunits › Mpv17_PMP22 | 0.60 | 41.0 | 3.80e-01 | 91.0% | 54.1% |
| 3346986 | 3711.1.1.4 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › DOG1 | 0.59 | 51.0 | 4.43e-01 | 97.8% | 61.0% |
| 3944081 | 601.1.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin | 0.59 | 43.0 | 3.99e-01 | 76.9% | 87.4% |
| 3325095 | 3711.1.1.22 ↗ | alpha bundles › LTXXQ motif family protein › LTXXQ motif family protein › LTXXQ motif family protein › Mpv17_PMP22 | 0.58 | 45.0 | 4.06e-01 | 90.3% | 58.4% |
| 5077213 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.58 | 43.0 | 3.95e-01 | 96.3% | 59.4% |
| 3290075 | 1075.1.2.1 ↗ | alpha bundles › Type II ABC exporter transmembrane domain fold › Type II ABC exporter transmembrane domain-related › MacB transmembrane domain › FtsX | 0.58 | 46.0 | 4.12e-01 | 96.3% | 60.0% |
| 3306059 | 3755.4.1.46 ↗ | alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › NET2A | 0.57 | 52.0 | 4.33e-01 | 100.0% | 77.9% |
| 3200327 | 5051.1.1.2 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease | 0.56 | 40.0 | 2.85e-01 | 73.9% | 71.1% |
| 3211434 | 633.21.1.0 ↗ | alpha bundles › Bromodomain-like › Uncharacterized protein PA2107 › Uncharacterized protein PA2107 | 0.56 | 38.0 | 3.74e-01 | 100.0% | 61.3% |
| 5026366 | 7064.1.1.1 ↗ | alpha bundles › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › Transmembrane domain of VIT1 › VIT1 | 0.56 | 41.0 | 3.76e-01 | 76.1% | 59.4% |
| 5073100 | 5082.1.1.1 ↗ | alpha bundles › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation efflux protein transmembrane domain-like › Cation_efflux | 0.56 | 53.0 | 4.29e-01 | 100.0% | 86.4% |
| 3193583 | 4207.1.1.0 ↗ | alpha duplicates or obligate multimers › Mediator hinge subcomplex-like › Mediator hinge subcomplex-like › RNA polymerase II holoenzyme component SRB7 (MED21) | 0.56 | 39.0 | 3.89e-01 | 91.8% | 68.6% |
| 5064991 | 601.4.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › Histidine kinase associated sensor domains › Histidine kinase associated sensor domains | 0.56 | 52.0 | 5.09e-01 | 100.0% | 93.8% |
| 3541653 | 3464.1.1.20 ↗ | extended segments › Helical region in V-type proton ATPase subunit E › Helical region in V-type proton ATPase subunit E › Helical region in V-type proton ATPase subunit E › FAM210A-B_dom | 0.56 | 33.0 | 3.91e-01 | 77.6% | 84.2% |
| 3244093 | 5045.1.1.1 ↗ | alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › ATP-synt_A | 0.56 | 46.0 | 4.07e-01 | 92.5% | 60.3% |
| 4669956 | 5060.1.1.0 ↗ | alpha bundles › V-type ATP synthase subunit C › V-type ATP synthase subunit C › V-type ATP synthase subunit C | 0.55 | 38.0 | 2.93e-01 | 70.9% | 69.2% |
| 4022600 | 150.1.1.107 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin › PF26021 | 0.55 | 44.0 | 3.42e-01 | 83.6% | 89.1% |
| 3350068 | 633.22.1.1 ↗ | alpha bundles › Bromodomain-like › Vitamin K epoxide reductase (VKOR) › Vitamin K epoxide reductase (VKOR) › VKOR | 0.55 | 41.0 | 3.89e-01 | 96.3% | 64.8% |
| 4295346 | 5045.1.1.1 ↗ | alpha bundles › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › F1F0 ATP synthase subunit A › ATP-synt_A | 0.54 | 50.0 | 4.27e-01 | 97.8% | 96.1% |
| 3191139 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.54 | 43.0 | 3.91e-01 | 100.0% | 63.4% |
| 5005724 | 3755.3.1.637 ↗ | alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › DUF7121 | 0.54 | 40.0 | 3.34e-01 | 76.9% | 69.8% |
| 3509261 | 601.15.1.2 ↗ | alpha bundles › Four-helical up-and-down bundle › Proteasome activator reg(alpha) › Proteasome activator reg(alpha) › PA28_C | 0.54 | 46.0 | 3.94e-01 | 100.0% | 57.7% |
| 3595715 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.54 | 47.0 | 3.70e-01 | 100.0% | 51.3% |
| 4034544 | 5067.1.1.6 ↗ | alpha bundles › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › Multidrug efflux transporter AcrB transmembrane domain › YibE_F | 0.53 | 49.0 | 3.98e-01 | 97.8% | 58.7% |
| 4038138 | 192.2.1.0 ↗ | alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin | 0.53 | 42.0 | 4.25e-01 | 82.1% | 84.6% |
| 3744877 | 4323.1.1.2 ↗ | alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V-ATPase_C | 0.53 | 47.0 | 4.41e-01 | 97.8% | 78.8% |
| 3221564 | 601.54.1.0 ↗ | alpha bundles › Four-helical up-and-down bundle › low CO2-inducible protein LCI1 › low CO2-inducible protein LCI1 | 0.52 | 38.0 | 3.77e-01 | 97.0% | 71.7% |
| 3621305 | 150.1.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › Ferritin/Heme oxygenase › Ferritin | 0.52 | 35.0 | 3.41e-01 | 97.0% | 61.3% |
| 5037154 | 4953.1.1.39 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › LPG_synthase_TM | 0.51 | 29.0 | 3.55e-01 | 94.0% | 87.1% |
| 4154012 | 5051.1.1.2 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › AA_permease | 0.51 | 46.0 | 3.20e-01 | 98.5% | 80.0% |
| 3327396 | 3890.1.1.1 ↗ | alpha bundles › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Transmembrane Bax inhibitor motif (TMBIM) proteins › Bax1-I | 0.51 | 47.0 | 3.98e-01 | 100.0% | 94.0% |
| 3439564 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.50 | 41.0 | 3.69e-01 | 85.8% | 64.9% |
| 3520656 | 5076.1.1.1 ↗ | alpha complex topology › Mitochondrial ADP/ATP carrier-like › Mitochondrial ADP/ATP carrier › Mitochondrial ADP/ATP carrier › Mito_carr | 0.50 | 44.0 | 3.93e-01 | 98.5% | 72.2% |
| 3206997 | 4177.1.1.14 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_2 | 0.50 | 46.0 | 3.65e-01 | 100.0% | 77.4% |
| 3213598 | 5057.1.1.1 ↗ | alpha bundles › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neurotransmitter-gated ion-channel transmembrane pore › Neur_chan_memb | 0.50 | 47.0 | 4.19e-01 | 100.0% | 74.9% |