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OQ101252.1__WDS61491.1__AClW8_015__00015
Bact-VirOQ101252.1__WDS61491.1__AClW8_015__00015
Identity
- Accession:
- OQ101252 ↗
- Kingdom:
- phage
Quality
89.0
mean pLDDT
Taxonomy
TaxID: 3014809
Cluster
View cluster (6 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-94
Domain cluster:
representative
CATH (48)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3agtA00 | 1.20.120.50 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hemerythrin-like | 0.78 | 54.0 | 4.37e-01 | 71.8% | 41.4% |
| 6xkyA01 | 1.20.1330.10 | Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain | 0.76 | 66.0 | 4.86e-01 | 97.2% | 69.5% |
| 4l0rB00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.74 | 51.0 | 5.12e-01 | 71.8% | 79.5% |
| 3a8pA02 | 6.10.140.680 | Special › Helix non-globular › Helix Hairpins › | 0.74 | 52.0 | 4.41e-01 | 73.2% | 71.9% |
| 4mtxD00 | 1.10.287.130 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Signal transduction histidine kinase, dimerisation/phosphotransfer (DHp) domain | 0.73 | 51.0 | 4.59e-01 | 71.8% | 57.9% |
| 6tkvA01 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.73 | 50.0 | 5.14e-01 | 71.8% | 79.4% |
| 4abmD00 | 1.10.287.1060 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like | 0.73 | 50.0 | 4.91e-01 | 71.8% | 74.0% |
| 3l8rA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.72 | 56.0 | 4.95e-01 | 83.1% | 86.3% |
| 3lphC00 | 6.10.140.630 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 49.0 | 5.25e-01 | 71.8% | 86.2% |
| 2pmsC00 | 6.10.140.920 | Special › Helix non-globular › Helix Hairpins › | 0.72 | 49.0 | 4.28e-01 | 71.8% | 82.6% |
| 3r84B00 | 6.10.280.160 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 | 0.69 | 48.0 | 4.61e-01 | 71.8% | 80.0% |
| 2rkhA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.67 | 46.0 | 4.53e-01 | 71.8% | 72.4% |
| 4ijjB00 | 1.20.120.910 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › DksA, coiled-coil domain | 0.67 | 46.0 | 3.78e-01 | 71.8% | 39.2% |
| 2wzkA01 | 1.20.1310.10 | Mainly Alpha › Up-down Bundle › 5 helical Cullin repeat like › Cullin Repeats | 0.67 | 50.0 | 4.23e-01 | 83.1% | 63.8% |
| 2e8gA01 | 1.20.1440.150 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › | 0.67 | 50.0 | 4.17e-01 | 80.3% | 72.6% |
| 6a95A01 | 1.10.238.10 | Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › EF-hand | 0.66 | 55.0 | 4.62e-01 | 94.4% | 90.5% |
| 3l1nA01 | 6.10.140.790 | Special › Helix non-globular › Helix Hairpins › | 0.66 | 44.0 | 4.83e-01 | 70.4% | 96.1% |
| 1orsC00 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.66 | 50.0 | 4.04e-01 | 80.3% | 82.6% |
| 4m0mA03 | 1.20.1270.430 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.65 | 45.0 | 4.40e-01 | 71.8% | 70.9% |
| 4asvA00 | 1.20.5.420 | Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C | 0.65 | 48.0 | 4.70e-01 | 81.7% | 70.9% |
| 2odmA00 | 1.10.287.750 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › SO2669-like | 0.65 | 51.0 | 4.97e-01 | 87.3% | 91.1% |
| 2cwoA01 | 1.20.58.1200 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › RNA silencing suppressor P21, N-terminal domain | 0.65 | 45.0 | 4.53e-01 | 73.2% | 86.5% |
| 2kkpA00 | 1.10.150.130 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Tyrosine recombinase, N-terminal domain | 0.65 | 44.0 | 3.74e-01 | 70.4% | 81.2% |
| 4adnA01 | 1.20.1280.250 | Mainly Alpha › Up-down Bundle › Monooxygenase › | 0.63 | 54.0 | 5.18e-01 | 97.2% | 95.3% |
| 1sj7C00 | 1.20.1420.10 | Mainly Alpha › Up-down Bundle › A middle domain of Talin 1 › Talin, central domain | 0.63 | 52.0 | 4.10e-01 | 95.8% | 72.3% |
| 3caxA01 | 1.20.120.520 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › nmb1532 protein domain like | 0.63 | 54.0 | 3.89e-01 | 97.2% | 92.6% |
| 2qqyA00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.62 | 49.0 | 3.99e-01 | 87.3% | 55.1% |
| 1nlxA00 | 1.20.120.320 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Group V grass pollen allergen | 0.61 | 51.0 | 4.57e-01 | 95.8% | 94.2% |
| 3kavA00 | 1.20.1270.360 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › | 0.61 | 45.0 | 4.03e-01 | 80.3% | 66.7% |
| 4dxwB01 | 1.20.120.350 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels. Chain C | 0.60 | 45.0 | 3.89e-01 | 78.9% | 93.6% |
| 1grjA01 | 1.10.287.180 | Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain | 0.59 | 40.0 | 4.04e-01 | 71.8% | 78.4% |
| 3ce9A02 | 1.20.1090.10 | Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain | 0.59 | 50.0 | 3.69e-01 | 94.4% | 71.6% |
| 1t5oA01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.58 | 49.0 | 4.03e-01 | 98.6% | 65.2% |
| 4errB00 | 1.20.58.1190 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.58 | 48.0 | 4.61e-01 | 98.6% | 78.3% |
| 3r2qA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.58 | 50.0 | 4.23e-01 | 93.0% | 95.6% |
| 4edgA01 | 3.90.980.10 | Alpha Beta › Alpha-Beta Complex › DNA primase DNAg catalytic core, N-terminal domain › DNA primase, catalytic core, N-terminal domain | 0.58 | 50.0 | 4.09e-01 | 98.6% | 100.0% |
| 2w02B01 | 1.10.150.640 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › AcsD, thumb domain, helical bundle | 0.57 | 39.0 | 3.86e-01 | 70.4% | 89.2% |
| 3knwB00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.57 | 46.0 | 3.64e-01 | 97.2% | 60.5% |
| 1kl9A02 | 1.10.150.190 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Translation initiation factor 2; subunit 1; domain 2 | 0.57 | 38.0 | 3.55e-01 | 70.4% | 57.6% |
| 6i3mE01 | 1.20.120.420 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › translation initiation factor eif-2b, domain 1 | 0.57 | 47.0 | 3.87e-01 | 94.4% | 89.8% |
| 1fioA00 | 1.20.58.70 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 49.0 | 3.64e-01 | 97.2% | 92.1% |
| 4h63H01 | 1.20.58.1710 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 49.0 | 4.92e-01 | 98.6% | 95.8% |
| 2ic6A00 | 1.20.58.90 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.56 | 48.0 | 4.88e-01 | 100.0% | 97.2% |
| 4fzsA00 | 1.20.1270.60 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain | 0.56 | 48.0 | 3.49e-01 | 100.0% | 42.1% |
| 1u8bA02 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.54 | 41.0 | 4.33e-01 | 84.5% | 95.1% |
| 4i1eA03 | 1.25.10.30 | Mainly Alpha › Alpha Horseshoe › Leucine-rich Repeat Variant › IP3 receptor type 1 binding core, RIH domain | 0.53 | 46.0 | 3.72e-01 | 97.2% | 60.4% |
| 4epzA00 | 1.25.40.810 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › UpxZ | 0.53 | 42.0 | 3.35e-01 | 88.7% | 56.5% |
| 4gltA02 | 1.20.1050.10 | Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › | 0.52 | 43.0 | 3.81e-01 | 97.2% | 97.4% |
ECOD (37)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3692897 | 3922.1.1.0 ↗ | alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 | 0.76 | 52.0 | 5.14e-01 | 70.4% | 73.3% |
| 3566072 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.73 | 51.0 | 5.14e-01 | 71.8% | 81.4% |
| 3414147 | 904.1.1.1 ↗ | few secondary structure elements › B-box zinc-binding domain-like › B-box zinc-binding domain › B-box zinc-binding domain › zf-B_box | 0.73 | 50.0 | 3.58e-01 | 71.8% | 29.3% |
| 3216342 | 601.1.1.95 ↗ | alpha bundles › Four-helical up-and-down bundle › alpha-catenin-related › alpha-catenin/vinculin › F_actin_bind | 0.72 | 50.0 | 4.26e-01 | 71.8% | 48.2% |
| 3784740 | 3712.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Mediator of RNA polymerase II transcription subunit 11 › Med11 | 0.72 | 49.0 | 4.84e-01 | 70.4% | 76.0% |
| 3944006 | 5086.1.1.0 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins | 0.71 | 49.0 | 4.08e-01 | 71.8% | 63.2% |
| 3537779 | 192.29.1.19 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › Cornichon | 0.71 | 61.0 | 4.68e-01 | 95.8% | 96.2% |
| 3211532 | 3684.1.1.0 ↗ | alpha complex topology › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like › PSPTO4464 C-terminal domain-like | 0.70 | 60.0 | 4.89e-01 | 97.2% | 92.9% |
| 3363809 | 4177.1.1.8 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 | 0.70 | 48.0 | 3.27e-01 | 71.8% | 60.0% |
| 3668286 | 604.12.1.0 ↗ | alpha bundles › Spectrin repeat-like › MIT domain › MIT domain | 0.70 | 49.0 | 5.01e-01 | 73.2% | 84.3% |
| 3473016 | 632.1.1.3 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Families 57/38 glycoside transferase middle domain › Families 57/38 glycoside transferase middle domain › Alpha-mann_mid | 0.70 | 48.0 | 4.08e-01 | 71.8% | 74.8% |
| 3597063 | 109.4.1.17 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Cullin | 0.69 | 55.0 | 3.46e-01 | 87.3% | 20.5% |
| 3387160 | 3755.1.1.8 ↗ | alpha bundles › YscO-like › Putative type III secretion protein YscO-related › Putative type III secretion protein YscO-related › FliJ | 0.69 | 47.0 | 3.75e-01 | 70.4% | 37.1% |
| 3646439 | 192.8.1.263 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain › DUF7615 | 0.68 | 47.0 | 4.46e-01 | 71.8% | 71.8% |
| 4879920 | 109.4.1.669 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_8,TTC7_N | 0.68 | 49.0 | 3.68e-01 | 80.3% | 32.3% |
| 3605285 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.67 | 55.0 | 4.39e-01 | 90.1% | 98.6% |
| 4024521 | 109.25.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › GPCR-autoproteolysis inducing domain subdomain A › GPCR-autoproteolysis inducing domain subdomain A | 0.67 | 50.0 | 4.52e-01 | 78.9% | 61.1% |
| 3971109 | 5086.1.1.85 ↗ | alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › HH_AAEA_pHBA | 0.66 | 45.0 | 4.50e-01 | 71.8% | 92.0% |
| 3962057 | 603.1.1.0 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins | 0.66 | 49.0 | 4.77e-01 | 78.9% | 81.0% |
| 1145724 | 601.21.1.4 ↗ | alpha bundles › Four-helical up-and-down bundle › FAD-dependent thiol oxidase › FAD-dependent thiol oxidase › Baculo_p33 | 0.65 | 53.0 | 4.71e-01 | 88.7% | 94.2% |
| 3639947 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.64 | 52.0 | 3.83e-01 | 87.3% | 53.0% |
| 3627597 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.63 | 56.0 | 3.49e-01 | 97.2% | 66.6% |
| 3547149 | 109.4.1.117 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › STAG,SCD | 0.62 | 55.0 | 3.38e-01 | 100.0% | 25.2% |
| 3261777 | 4177.1.1.8 ↗ | alpha duplicates or obligate multimers › BAR/IMD domain-like › BAR/IMD domain-like › BAR/IMD domain-like › BAR_3 | 0.62 | 57.0 | 3.91e-01 | 100.0% | 67.1% |
| 3798984 | 3560.1.1.0 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 | 0.62 | 52.0 | 3.78e-01 | 93.0% | 56.9% |
| 4444927 | 3877.1.1.1 ↗ | alpha bundles › Membrane protein insertase YidC-related › Membrane protein insertase YidC-related › Membrane protein insertase YidC › 60KD_IMP | 0.61 | 46.0 | 3.37e-01 | 85.9% | 82.5% |
| 3527434 | 6006.1.1.6 ↗ | extended segments › Voltage gated calcium channel IQ domain › Voltage gated calcium channel IQ domain › Voltage gated calcium channel IQ domain › PF27661 | 0.61 | 55.0 | 4.24e-01 | 100.0% | 76.8% |
| 4572664 | 604.3.1.0 ↗ | alpha bundles › Spectrin repeat-like › BAG domain › BAG domain | 0.60 | 49.0 | 4.98e-01 | 93.0% | 98.6% |
| 3391706 | 192.5.1.0 ↗ | alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat | 0.59 | 50.0 | 4.15e-01 | 100.0% | 52.3% |
| 3484074 | 192.8.1.0 ↗ | alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain | 0.59 | 51.0 | 4.10e-01 | 97.2% | 79.3% |
| 4243427 | 3560.1.1.1 ↗ | a+b complex topology › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 › Mediator of RNA polymerase II transcription subunit 8 › Med8 | 0.59 | 52.0 | 3.99e-01 | 98.6% | 44.4% |
| 3610580 | 192.29.1.0 ↗ | alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) | 0.58 | 47.0 | 3.87e-01 | 91.5% | 99.3% |
| 3478399 | 604.8.1.0 ↗ | alpha bundles › Spectrin repeat-like › Smac/diablo › Smac/diablo | 0.57 | 49.0 | 3.44e-01 | 97.2% | 84.8% |
| 3791 | 603.1.1.1 ↗ | alpha bundles › STAT-like › t-snare proteins › t-snare proteins › Syntaxin | 0.56 | 49.0 | 3.64e-01 | 97.2% | 92.1% |
| 3774553 | 223.2.1.22 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like › Folliculin | 0.54 | 45.0 | 3.08e-01 | 100.0% | 25.4% |
| 3589727 | 101.1.1.0 ↗ | alpha arrays › HTH › HTH › Three-helical HTH | 0.52 | 44.0 | 4.06e-01 | 94.4% | 76.3% |
| 3859306 | 109.4.1.898 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › TPR_leprecan | 0.51 | 46.0 | 3.43e-01 | 100.0% | 40.6% |