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OQ129426.1__WFG33926.1__F10086_4__00004
Bact-VirOQ129426.1__WFG33926.1__F10086_4__00004
Identity
- Accession:
- OQ129426 ↗
- Kingdom:
- phage
Quality
80.7
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Herelleviridae›
Baoshanvirus›
Staphylococcus_phage_vB_SauM_JDF86
TaxID: 3038179
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-70
Domain cluster:
representative
CATH (27)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4py5A01 | 3.30.310.10 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein | 0.70 | 55.0 | 5.45e-01 | 100.0% | 83.3% |
| 4emyA01 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.69 | 47.0 | 3.54e-01 | 100.0% | 29.4% |
| 1ex0B02 | 3.90.260.10 | Alpha Beta › Alpha-Beta Complex › Coagulation Factor XIII; Chain A, domain 2 › Transglutaminase-like | 0.65 | 44.0 | 2.91e-01 | 71.4% | 35.8% |
| 1xmtA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.61 | 45.0 | 4.13e-01 | 80.0% | 91.6% |
| 3rlfF02 | 3.10.650.10 | Alpha Beta › Roll › MalF N-terminal region-like › MalF N-terminal region-like | 0.58 | 45.0 | 4.35e-01 | 100.0% | 73.2% |
| 2hoxA03 | 3.90.1150.10 | Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 | 0.58 | 41.0 | 3.60e-01 | 100.0% | 46.9% |
| 6j8yC00 | 3.70.10.10 | Alpha Beta › Box › Proliferating Cell Nuclear Antigen › | 0.56 | 48.0 | 3.38e-01 | 100.0% | 91.8% |
| 3ecqA01 | 2.60.120.870 | Mainly Beta › Sandwich › Jelly Rolls › | 0.56 | 39.0 | 2.97e-01 | 74.3% | 44.3% |
| 1n7oA03 | 2.60.220.10 | Mainly Beta › Sandwich › Chondroitinase Ac; Chain A, domain 3 › Polysaccharide lyase family 8-like, C-terminal | 0.56 | 42.0 | 4.02e-01 | 82.9% | 84.7% |
| 6grrB01 | 3.30.457.10 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › Copper amine oxidase-like, N-terminal domain | 0.56 | 46.0 | 4.49e-01 | 92.9% | 93.7% |
| 3gdoA02 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.55 | 47.0 | 3.52e-01 | 100.0% | 82.4% |
| 4q1vA01 | 2.140.10.30 | Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain | 0.55 | 41.0 | 2.51e-01 | 80.0% | 23.0% |
| 3i7dA00 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.55 | 42.0 | 3.24e-01 | 82.9% | 91.7% |
| 4bq6F00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.54 | 47.0 | 3.70e-01 | 98.6% | 63.8% |
| 1nstA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 38.0 | 2.59e-01 | 98.6% | 19.1% |
| 3sfvB02 | 6.10.140.2010 | Special › Helix non-globular › Helix Hairpins › | 0.53 | 39.0 | 2.86e-01 | 78.6% | 100.0% |
| 4pbcA02 | 3.20.10.10 | Alpha Beta › Alpha-Beta Barrel › D-amino Acid Aminotransferase; Chain A, domain 2 › D-amino Acid Aminotransferase, subunit A, domain 2 | 0.53 | 44.0 | 3.66e-01 | 95.7% | 52.3% |
| 3k1lA01 | 3.30.457.40 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.53 | 43.0 | 3.98e-01 | 92.9% | 88.0% |
| 2hezA00 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.52 | 45.0 | 2.99e-01 | 100.0% | 71.7% |
| 5hkeA01 | 3.60.60.10 | Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A | 0.52 | 45.0 | 2.99e-01 | 100.0% | 73.0% |
| 3ctzA02 | 3.40.350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Creatine Amidinohydrolase; Chain A, domain 1 › Creatinase/prolidase N-terminal domain | 0.52 | 45.0 | 3.50e-01 | 100.0% | 84.8% |
| 3ajvC02 | 3.40.1350.10 | Alpha Beta › 3-Layer(aba) Sandwich › Trna Endonuclease; Chain: A, domain 1 › | 0.52 | 45.0 | 4.15e-01 | 100.0% | 85.7% |
| 2o0aA00 | 3.40.850.20 | Alpha Beta › 3-Layer(aba) Sandwich › Kinesin › | 0.51 | 44.0 | 3.02e-01 | 98.6% | 53.2% |
| 7xr9E01 | 3.30.360.10 | Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 | 0.51 | 42.0 | 3.22e-01 | 100.0% | 89.8% |
| 1nr0A01 | 2.130.10.10 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase | 0.50 | 43.0 | 2.86e-01 | 95.7% | 96.0% |
| 4chjA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.50 | 37.0 | 3.16e-01 | 81.4% | 81.5% |
| 1fblA02 | 2.110.10.10 | Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain | 0.50 | 34.0 | 2.56e-01 | 71.4% | 40.3% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5000881 | 223.2.1.0 ↗ | a+b three layers › Profilin-like › profilin-like › profilin-like | 0.76 | 53.0 | 4.06e-01 | 74.3% | 32.9% |
| 3409029 | 331.23.1.2 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › IntS9_C | 0.73 | 62.0 | 6.15e-01 | 100.0% | 89.2% |
| 4178706 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.73 | 61.0 | 5.59e-01 | 100.0% | 69.5% |
| 3556708 | 247.1.1.38 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C | 0.70 | 61.0 | 6.01e-01 | 100.0% | 92.0% |
| 4998264 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.70 | 59.0 | 5.57e-01 | 100.0% | 76.5% |
| 3550365 | 331.23.1.2 ↗ | a+b two layers › TBP-like › Integrator IntS9/IntS11 C-terminal domain › Integrator IntS9/IntS11 C-terminal domain › IntS9_C | 0.68 | 58.0 | 5.60e-01 | 100.0% | 85.9% |
| 3486200 | 5.1.5.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed | 0.67 | 48.0 | 2.91e-01 | 75.7% | 21.3% |
| 3281384 | 150.5.1.0 ↗ | alpha bundles › Ferritin/Heme oxygenase/4-helical cytokines › ESAT-6 like › ESAT-6 like | 0.66 | 39.0 | 4.54e-01 | 91.4% | 91.1% |
| 3263503 | 331.4.1.9 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C | 0.64 | 52.0 | 5.16e-01 | 100.0% | 88.0% |
| 5014721 | 331.1.1.0 ↗ | a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like | 0.64 | 55.0 | 4.97e-01 | 100.0% | 71.6% |
| 3305034 | 7512.1.1.6 ↗ | a/b three-layered sandwiches › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › UDP-Glycosyltransferase/glycogen phosphorylase › Glyco_transf_20 | 0.62 | 48.0 | 3.68e-01 | 87.1% | 42.8% |
| 3992641 | 331.4.1.9 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 › CPSF73-100_C | 0.61 | 50.0 | 5.07e-01 | 100.0% | 94.3% |
| 4019237 | 304.48.1.37 ↗ | a+b two layers › Alpha-beta plaits › Adenylyl and guanylyl cyclase catalytic domain-like › Adenylyl and guanylyl cyclase catalytic domain-like › RVT_2 | 0.61 | 52.0 | 3.65e-01 | 100.0% | 28.5% |
| 5003963 | 5.1.11.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › eIF2A | 0.61 | 42.0 | 2.60e-01 | 71.4% | 19.5% |
| 4959202 | 331.10.2.0 ↗ | a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase | 0.58 | 50.0 | 4.61e-01 | 100.0% | 76.8% |
| 3260511 | 386.1.1.71 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › SURF2 | 0.58 | 41.0 | 4.41e-01 | 81.4% | 96.4% |
| 4934604 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.57 | 40.0 | 2.64e-01 | 74.3% | 19.4% |
| 4017003 | 223.1.1.21 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › HODM_asu-like | 0.57 | 42.0 | 2.75e-01 | 100.0% | 17.1% |
| 3717837 | 633.23.1.23 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin › Amastin | 0.54 | 47.0 | 3.51e-01 | 98.6% | 96.8% |
| 3595430 | 633.23.1.0 ↗ | alpha bundles › Bromodomain-like › Claudin › Claudin | 0.54 | 47.0 | 3.42e-01 | 98.6% | 96.0% |
| 3634459 | 327.7.1.1 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › Cation efflux protein cytoplasmic domain-like › Cation efflux protein cytoplasmic domain-like › ZT_dimer | 0.53 | 47.0 | 4.05e-01 | 100.0% | 70.9% |
| 4558923 | 865.1.1.2 ↗ | beta complex topology › PheT/TilS domain › PheT/TilS domain › PheT/TilS domain › TilS_C | 0.53 | 42.0 | 3.66e-01 | 85.7% | 96.2% |
| 3700873 | 3343.1.1.2 ↗ | alpha complex topology › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › gamma-tubulin complex protein 4 (GCP4) › GCP_C_terminal,GCP_N_terminal | 0.53 | 38.0 | 2.29e-01 | 87.1% | 9.2% |
| 3448896 | 325.1.7.0 ↗ | a+b complex topology › alpha/beta-Hammerhead/Barrel-sandwich hybrid › alpha/beta-Hammerhead/Barrel-sandwich hybrid › Single hybrid motif | 0.52 | 36.0 | 3.33e-01 | 70.0% | 75.6% |
| 3390799 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.52 | 38.0 | 3.81e-01 | 78.6% | 84.3% |
| 3283531 | 5.1.3.23 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › SGL | 0.52 | 37.0 | 2.57e-01 | 75.7% | 28.2% |
| 4997629 | 298.1.1.24 ↗ | a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 | 0.52 | 44.0 | 3.35e-01 | 100.0% | 43.8% |
| 3718255 | 2.1.1.37 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind | 0.52 | 36.0 | 3.03e-01 | 72.9% | 85.8% |
| 3389846 | 386.1.1.0 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers | 0.51 | 37.0 | 3.81e-01 | 81.4% | 84.6% |
| 4990696 | 2003.1.1.22 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › GFO_IDH_MocA | 0.51 | 43.0 | 2.90e-01 | 100.0% | 35.9% |
| 4588825 | 589.1.1.20 ↗ | alpha arrays › Triger factor/SurA peptide-binding domain-like › Triger factor/SurA peptide-binding domain-like › Porin chaperone SurA, peptide-binding domain › TraD_N | 0.51 | 45.0 | 3.68e-01 | 100.0% | 63.8% |
| 3512585 | 5010.1.1.5 ↗ | extended segments › Bacterial aa3 type cytochrome c oxidase subunit IV › Bacterial aa3 type cytochrome c oxidase subunit IV › Bacterial aa3 type cytochrome c oxidase subunit IV › TraD_N | 0.51 | 45.0 | 3.82e-01 | 100.0% | 72.2% |
| 3407018 | 391.1.2.11 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related › VWC2L_2nd | 0.50 | 34.0 | 3.65e-01 | 72.9% | 81.7% |