←Back to structures
OQ129426.1__WFG33988.1__F10086_66__00066
Bact-VirOQ129426.1__WFG33988.1__F10086_66__00066
Identity
- Accession:
- OQ129426 ↗
- Kingdom:
- phage
Quality
68.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Herelleviridae›
Baoshanvirus›
Staphylococcus_phage_vB_SauM_JDF86
TaxID: 3038179
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-41
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3ungC02 | 1.10.10.1720 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › CRISPR-Cas system, Cmr2 subunit, D2 domain, helical bundle | 0.73 | 50.0 | 3.98e-01 | 97.4% | 35.9% |
| 6aikB00 | 3.40.50.10300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › CoaB-like | 0.63 | 53.0 | 3.19e-01 | 100.0% | 76.3% |
| 1eblA02 | 3.40.47.10 | Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase | 0.62 | 46.0 | 3.15e-01 | 84.6% | 32.0% |
| 1m1cA00 | 3.90.1840.10 | Alpha Beta › Alpha-Beta Complex › Major capsid protein › Major capsid protein | 0.61 | 52.0 | 2.87e-01 | 97.4% | 8.1% |
| 1t82A00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.60 | 52.0 | 3.52e-01 | 97.4% | 33.1% |
| 2bx9A00 | 6.20.20.10 | Special › Other non-globular › Chaperone, DNAj Protein; Chain A › | 0.59 | 40.0 | 3.63e-01 | 79.5% | 50.9% |
| 1ps9A01 | 3.20.20.70 | Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Aldolase class I | 0.57 | 45.0 | 2.64e-01 | 94.9% | 40.2% |
| 4xotA01 | 6.10.20.90 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › Hk620 tailspike protein, N-terminal domain-like | 0.53 | 44.0 | 3.57e-01 | 94.9% | 47.4% |
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2986047 | 101.1.1.7 ↗ | alpha arrays › HTH › HTH › Three-helical HTH › Ribosomal_S18 | 0.72 | 52.0 | 4.56e-01 | 94.9% | 52.6% |
| 4945137 | 2004.1.1.19 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Ras | 0.66 | 55.0 | 3.43e-01 | 100.0% | 55.9% |
| 3183007 | 5051.1.1.7 ↗ | alpha complex topology › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Sodium:neurotransmitter symporter family (SNF)-like › Nramp | 0.65 | 55.0 | 3.11e-01 | 94.9% | 10.2% |
| 3357520 | 310.2.1.28 ↗ | a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › Myb_DNA-bind_3 | 0.55 | 43.0 | 3.49e-01 | 100.0% | 43.5% |