←Back to structures
OQ129426.1__WFG34091.1__F10086_169__00169
Bact-VirOQ129426.1__WFG34091.1__F10086_169__00169
Identity
- Accession:
- OQ129426 ↗
- Kingdom:
- phage
Quality
89.1
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Herelleviridae›
Baoshanvirus›
Staphylococcus_phage_vB_SauM_JDF86
TaxID: 3038179
Cluster
View cluster (4 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 11-63
Domain cluster:
representative
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2b1xA01 | 3.90.380.10 | Alpha Beta › Alpha-Beta Complex › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 › Naphthalene 1,2-dioxygenase Alpha Subunit; Chain A, domain 1 | 0.60 | 42.0 | 2.63e-01 | 73.6% | 53.0% |
| 1vbkA01 | 3.30.70.1510 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › THUMP domain-like | 0.57 | 44.0 | 3.83e-01 | 83.0% | 96.4% |
| 7vhqU01 | 3.30.479.30 | Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › Band 7 domain | 0.56 | 44.0 | 3.71e-01 | 98.1% | 87.3% |
| 3kxwA02 | 3.30.300.30 | Alpha Beta › 2-Layer Sandwich › GMP Synthetase; Chain A, domain 3 › ANL, C-terminal domain | 0.56 | 42.0 | 3.24e-01 | 83.0% | 66.1% |
| 1mg7A02 | 3.30.230.10 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › | 0.52 | 35.0 | 2.64e-01 | 71.7% | 24.2% |
| 2wadA02 | 3.90.1310.10 | Alpha Beta › Alpha-Beta Complex › Penicillin-binding protein 2a (Domain 2) › Penicillin-binding protein 2a (Domain 2) | 0.51 | 35.0 | 2.59e-01 | 71.7% | 82.4% |
| 1vl7A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 31.0 | 2.36e-01 | 73.6% | 22.2% |
ECOD (6)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3178317 | 327.5.1.6 ↗ | a+b two layers › Alpha-lytic protease prodomain-like › a+b domain in acetyl-CoA synthetase-like proteins › a+b domain in acetyl-CoA synthetase-like proteins › AMP-dom_DIP2-like | 0.66 | 58.0 | 4.36e-01 | 100.0% | 68.5% |
| 3738063 | 2003.1.2.60 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › DAO, NAD_binding_8 | 0.57 | 40.0 | 2.39e-01 | 73.6% | 45.2% |
| 3487881 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 45.0 | 3.23e-01 | 96.2% | 31.1% |
| 3343879 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 39.0 | 3.07e-01 | 79.2% | 99.2% |
| 3476172 | 304.127.1.0 ↗ | a+b two layers › Alpha-beta plaits › Notch heterodimerization domain › Notch heterodimerization domain | 0.53 | 38.0 | 3.01e-01 | 81.1% | 93.8% |
| 4483977 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.52 | 35.0 | 2.98e-01 | 71.7% | 69.0% |