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OQ135105.1__WCD56198.1__X__00012

Bact-Vir

OQ135105.1__WCD56198.1__X__00012

Identity

Accession:
OQ135105 ↗
Kingdom:
phage

Quality

82.1 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-60
PDB
Domain cluster: representative
CATH (58)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ckkA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 65.0 6.64e-01 98.2% 96.2%
7k9cA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 63.0 5.42e-01 96.4% 57.0%
1vx7N01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.77 65.0 5.61e-01 100.0% 60.0%
6c6sD02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.75 62.0 6.03e-01 100.0% 83.3%
2egcA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.75 66.0 5.96e-01 98.2% 77.3%
1wfwA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.74 64.0 5.86e-01 100.0% 83.8%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 65.0 6.18e-01 100.0% 95.3%
1zuyA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.73 63.0 6.26e-01 96.4% 98.3%
5ycqA00 2.30.30.390 Mainly Beta › Roll › SH3 type barrels. › Hemimethylated DNA-binding domain 0.73 59.0 5.32e-01 100.0% 64.9%
6vlfA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.71 62.0 6.10e-01 98.2% 98.3%
2kdsA01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.70 58.0 5.03e-01 100.0% 59.3%
1yn8A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.70 61.0 6.04e-01 98.2% 96.6%
3ntkA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.70 55.0 4.89e-01 100.0% 60.0%
2ekhA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.69 62.0 5.48e-01 100.0% 70.0%
3pieB05 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 60.0 5.76e-01 100.0% 89.1%
5o99A00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 58.0 5.71e-01 98.2% 91.7%
1t0hA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.66 54.0 4.59e-01 94.5% 67.7%
6bioA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 53.0 5.31e-01 90.9% 100.0%
5yprA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.65 56.0 4.99e-01 100.0% 83.1%
2evrA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 54.0 4.97e-01 100.0% 89.2%
4cshA00 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.62 53.0 3.92e-01 100.0% 36.0%
3r5lA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.62 51.0 4.05e-01 92.7% 97.4%
3ifvC00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.61 48.0 3.20e-01 90.9% 47.5%
4qxaB00 2.30.29.230 Mainly Beta › Roll › PH-domain like › 0.59 52.0 3.85e-01 100.0% 65.3%
2xklA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.59 48.0 3.71e-01 100.0% 60.4%
2zkmX01 2.30.29.240 Mainly Beta › Roll › PH-domain like › 0.58 51.0 3.46e-01 100.0% 49.0%
2d9xA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 49.0 3.96e-01 100.0% 70.0%
1yy3A02 2.40.10.240 Mainly Beta › Beta Barrel › Thrombin, subunit H › QueA-like 0.56 46.0 3.99e-01 100.0% 79.8%
2vseA02 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.56 46.0 3.55e-01 98.2% 99.3%
4zk3A02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.56 42.0 3.29e-01 83.6% 71.7%
2dhkA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 47.0 3.98e-01 100.0% 77.0%
7t8tA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 48.0 3.70e-01 100.0% 73.3%
1v5pA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 47.0 3.95e-01 100.0% 83.5%
2rrfA00 2.30.29.160 Mainly Beta › Roll › PH-domain like › Zinc finger FYVE domain-containing protein 21, C-terminal 0.56 48.0 3.63e-01 100.0% 61.0%
3fssA01 2.30.29.120 Mainly Beta › Roll › PH-domain like › 0.56 42.0 3.24e-01 85.5% 44.1%
3zhaQ02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.55 41.0 3.23e-01 83.6% 67.9%
2b5uA03 3.10.380.10 Alpha Beta › Roll › Ribonuclease domain of colicin e3 (Residues 456-551) › Colicin E3-like ribonuclease domain 0.55 46.0 3.91e-01 98.2% 73.5%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.55 47.0 3.70e-01 100.0% 61.3%
1o5yA00 3.10.690.10 Alpha Beta › Roll › Bifunctional nuclease domain › Bifunctional nuclease domain 0.55 45.0 3.48e-01 100.0% 83.9%
1pvgA01 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.54 42.0 2.82e-01 89.1% 65.6%
4hgzA02 2.20.25.570 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.54 44.0 4.30e-01 90.9% 83.3%
1ospO01 2.40.128.160 Mainly Beta › Beta Barrel › Lipocalin › C1 set domains (antibody constant domain-like) 0.54 40.0 3.38e-01 98.2% 44.8%
1lf6A01 2.70.98.10 Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › 0.53 39.0 2.58e-01 81.8% 32.6%
2kd2A01 2.40.128.180 Mainly Beta › Beta Barrel › Lipocalin › 0.53 38.0 3.48e-01 81.8% 82.1%
2vseA04 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.53 44.0 3.41e-01 100.0% 94.4%
3fgqA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.53 42.0 3.06e-01 94.5% 76.9%
1attA01 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.53 39.0 3.00e-01 83.6% 68.6%
3ndaA02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.52 39.0 3.05e-01 83.6% 69.7%
2kf2A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 43.0 3.11e-01 94.5% 56.9%
1mg2A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.52 41.0 2.55e-01 92.7% 86.6%
4boeA00 2.40.128.20 Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain 0.52 42.0 3.18e-01 98.2% 52.6%
1maiA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 44.0 3.50e-01 100.0% 76.5%
6eufA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.51 39.0 2.56e-01 90.9% 88.6%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.51 39.0 3.31e-01 92.7% 70.0%
1zyoA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.51 34.0 2.91e-01 76.4% 38.6%
4msxA02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.51 40.0 2.55e-01 100.0% 16.2%
3vsfC01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.50 40.0 2.57e-01 96.4% 46.2%
4jonC00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.50 42.0 3.40e-01 98.2% 64.4%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3782313 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.77 68.0 6.18e-01 100.0% 84.0%
3508441 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 63.0 5.23e-01 100.0% 53.7%
3723465 4.1.1.5 beta barrels › SH3 › SH3 › SH3 › KOW,Ribosomal_L14e 0.73 65.0 4.73e-01 100.0% 37.2%
4027263 4.1.1.104 beta barrels › SH3 › SH3 › SH3 › KN17_SH3 0.73 65.0 5.04e-01 100.0% 45.8%
4218488 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.73 65.0 5.75e-01 100.0% 77.5%
3480822 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 58.0 6.04e-01 98.2% 96.0%
160765 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.72 63.0 5.67e-01 100.0% 84.4%
3508319 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 62.0 5.88e-01 100.0% 81.5%
3999507 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 63.0 5.87e-01 100.0% 90.0%
3938415 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.71 62.0 5.91e-01 98.2% 95.4%
3784140 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 59.0 5.99e-01 98.2% 94.5%
3743464 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.70 62.0 5.58e-01 100.0% 84.0%
3475429 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.69 61.0 5.65e-01 100.0% 95.7%
2803945 4.1.1.24 beta barrels › SH3 › SH3 › SH3 › Ribosomal_L14e 0.69 56.0 4.17e-01 100.0% 35.5%
3926120 4.1.1.169 beta barrels › SH3 › SH3 › SH3 › DUF4819 0.69 59.0 4.41e-01 100.0% 38.6%
3908017 4.1.1.253 beta barrels › SH3 › SH3 › SH3 › DUF4537 0.68 60.0 5.29e-01 100.0% 76.2%
3924760 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 60.0 5.09e-01 100.0% 66.7%
3715264 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.67 57.0 4.52e-01 100.0% 80.8%
3801515 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 55.0 4.56e-01 94.5% 69.0%
3482559 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 56.0 4.01e-01 100.0% 31.2%
3795559 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.65 56.0 4.61e-01 100.0% 97.1%
3471154 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.64 56.0 4.40e-01 100.0% 75.0%
3538619 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.63 55.0 4.19e-01 100.0% 66.9%
3789697 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.63 54.0 4.27e-01 100.0% 80.8%
3749868 220.1.1.14 beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom 0.62 52.0 4.00e-01 100.0% 63.6%
3596847 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 51.0 4.26e-01 100.0% 73.3%
3700022 220.1.1.14 beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom 0.61 51.0 4.25e-01 100.0% 73.3%
5049591 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.61 52.0 5.03e-01 100.0% 98.5%
3775561 220.1.1.14 beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom 0.61 50.0 4.03e-01 100.0% 68.8%
3269940 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.60 49.0 3.16e-01 92.7% 36.4%
3617025 220.1.1.56 beta barrels › PH domain-like › PH domain-like › PH domain-like › ASK_PH 0.60 52.0 4.06e-01 100.0% 67.2%
3593276 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 49.0 3.97e-01 100.0% 64.8%
3243787 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 51.0 4.44e-01 100.0% 83.3%
3481279 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.60 51.0 4.21e-01 100.0% 81.9%
3237402 5084.4.1.2 beta barrels › Outer membrane meander beta-barrels › Outer membrane phospholipase A (OMPLA) › Outer membrane phospholipase A (OMPLA) › DUF7042 0.60 50.0 3.80e-01 100.0% 77.2%
3176357 5.1.5.4 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DPPIV_N 0.59 47.0 2.80e-01 90.9% 18.9%
3605177 220.1.1.14 beta barrels › PH domain-like › PH domain-like › PH domain-like › DM10_dom 0.59 50.0 3.99e-01 100.0% 67.5%
3500814 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.59 52.0 4.05e-01 100.0% 64.2%
3251953 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.59 41.0 4.35e-01 90.9% 91.1%
3470251 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.59 51.0 4.13e-01 100.0% 70.0%
3593969 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 50.0 3.88e-01 100.0% 82.3%
3592788 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 50.0 3.93e-01 100.0% 73.3%
3508683 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.58 50.0 3.84e-01 100.0% 81.5%
3239355 220.1.1.46 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_14 0.57 49.0 3.81e-01 100.0% 78.5%
3791851 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 49.0 3.71e-01 100.0% 73.1%
3390005 220.1.1.36 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.57 49.0 3.77e-01 100.0% 73.3%
4220972 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.57 49.0 3.02e-01 100.0% 18.1%
3917645 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 47.0 3.82e-01 100.0% 79.2%
3542483 243.3.1.36 a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › Herpes_UL52 0.57 44.0 3.81e-01 90.9% 55.8%
4334199 77.1.1.1 beta meanders › open-sided beta-meander › Outer surface protein › Outer surface protein › Lipoprotein_1 0.56 42.0 3.36e-01 98.2% 36.8%
3272546 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.56 48.0 3.77e-01 100.0% 71.2%
3936442 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.56 49.0 4.04e-01 100.0% 78.0%
3627951 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 47.0 4.03e-01 100.0% 80.0%
3924469 5.1.3.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.55 42.0 2.92e-01 89.1% 36.4%
3878278 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.55 47.0 3.51e-01 100.0% 68.7%
3490216 220.1.1.36 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.54 46.0 3.64e-01 100.0% 73.6%
4890891 108.1.1.0 alpha arrays › EF-hand › EF-hand-related › EF-hand 0.53 45.0 3.43e-01 100.0% 78.5%
3940504 220.1.1.36 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_12 0.53 46.0 3.14e-01 100.0% 50.2%
3593811 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.52 42.0 3.44e-01 100.0% 91.2%
3719143 227.1.1.0 a+b two layers › DNA clamp › DNA clamp › DNA clamp 0.51 39.0 3.14e-01 92.7% 90.4%
4943301 375.1.1.0 few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.50 33.0 3.39e-01 70.9% 74.0%