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OQ183418.1__WCO82061.1__vBPpSSYP_79__00079
Bact-VirOQ183418.1__WCO82061.1__vBPpSSYP_79__00079
Identity
- Accession:
- OQ183418 ↗
- Kingdom:
- phage
Quality
79.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-64
Domain cluster:
representative
CATH (12)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 7d8gA01 | 2.40.380.10 | Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like | 0.63 | 54.0 | 4.04e-01 | 100.0% | 56.3% |
| 3tfmA01 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.61 | 48.0 | 4.18e-01 | 87.3% | 68.7% |
| 1zpsA01 | 3.10.20.810 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphoribosyl-AMP cyclohydrolase | 0.60 | 53.0 | 4.66e-01 | 100.0% | 74.7% |
| 3exmA01 | 2.40.380.10 | Mainly Beta › Beta Barrel › FomD barrel-like fold › FomD-like | 0.58 | 49.0 | 3.58e-01 | 100.0% | 60.5% |
| 1zc0A00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.56 | 39.0 | 2.58e-01 | 92.1% | 16.4% |
| 4xzjA01 | 3.90.176.10 | Alpha Beta › Alpha-Beta Complex › Toxin ADP-ribosyltransferase; Chain A, domain 1 › Toxin ADP-ribosyltransferase; Chain A, domain 1 | 0.55 | 46.0 | 3.19e-01 | 93.7% | 50.2% |
| 5j39A01 | 2.40.50.90 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.54 | 39.0 | 3.16e-01 | 79.4% | 83.3% |
| 4hpqB00 | 2.60.270.60 | Mainly Beta › Sandwich › Mutm (Fpg) Protein; Chain: A, domain 2 › Autophagy-related protein 31 | 0.53 | 48.0 | 3.90e-01 | 100.0% | 66.1% |
| 1p1hB01 | 3.30.2360.10 | Alpha Beta › 2-Layer Sandwich › Glyceraldehyde-3-phosphate dehydrogenase-like fold › Glyceraldehyde-3-phosphate dehydrogenase-like domain | 0.52 | 40.0 | 2.87e-01 | 81.0% | 60.8% |
| 2dyiA01 | 2.40.30.60 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM | 0.52 | 38.0 | 3.56e-01 | 100.0% | 60.7% |
| 3qcmA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.51 | 39.0 | 2.59e-01 | 92.1% | 18.5% |
| 3k44B00 | 3.30.2450.30 | Alpha Beta › 2-Layer Sandwich › Secreted effector protein pipB2 fold › | 0.51 | 39.0 | 3.16e-01 | 88.9% | 91.4% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4947785 | 239.1.1.0 ↗ | beta barrels › Ribosomal protein L25-like › Ribosomal protein L25-like › Ribosomal protein L25-like | 0.66 | 53.0 | 5.17e-01 | 100.0% | 79.7% |
| 3741375 | 239.3.1.0 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain | 0.64 | 58.0 | 4.48e-01 | 100.0% | 47.4% |
| 3598574 | 2004.1.1.250 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Kinesin,Microtub_bd | 0.63 | 47.0 | 2.90e-01 | 82.5% | 92.9% |
| 4438870 | 239.2.1.1 ↗ | beta barrels › Ribosomal protein L25-like › HisI-like › HisI-like › PRA-CH | 0.61 | 53.0 | 4.44e-01 | 100.0% | 66.4% |
| 3628236 | 4291.1.1.1 ↗ | beta barrels › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol-binding protein › Oxysterol_BP | 0.58 | 51.0 | 3.10e-01 | 100.0% | 68.1% |
| 3507373 | 391.1.1.7 ↗ | few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 | 0.57 | 35.0 | 3.38e-01 | 81.0% | 52.0% |
| 4024504 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.57 | 41.0 | 3.61e-01 | 79.4% | 62.0% |
| 3992373 | 220.1.1.10 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › SSrecog | 0.57 | 43.0 | 3.80e-01 | 82.5% | 55.8% |
| 4192670 | 5093.1.1.5 ↗ | a+b complex topology › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Head and neck region of the ectodomain of paramyxoviruses fusion glycoprotein › Gypsy | 0.56 | 49.0 | 3.10e-01 | 100.0% | 65.7% |
| 3252939 | 2.1.1.37 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › OB_NTP_bind | 0.56 | 39.0 | 3.90e-01 | 74.6% | 100.0% |
| 3926774 | 101.1.8.0 ↗ | alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes | 0.55 | 45.0 | 3.51e-01 | 90.5% | 61.4% |
| 2410012 | 237.1.1.2 ↗ | a+b complex topology › ADP-ribosylation › ADP-ribosylation › ADP-ribosylation › ART | 0.53 | 45.0 | 3.22e-01 | 93.7% | 49.2% |
| 3275931 | 2.1.1.87 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › RPA43_OB | 0.53 | 38.0 | 3.16e-01 | 76.2% | 90.4% |
| 4209058 | 1.1.7.11 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › RimM | 0.53 | 45.0 | 3.95e-01 | 100.0% | 63.0% |
| 3938105 | 2.1.1.253 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF29478 | 0.51 | 37.0 | 3.59e-01 | 92.1% | 68.6% |
| 4945723 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.51 | 38.0 | 3.32e-01 | 81.0% | 95.0% |
| 3225098 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 36.0 | 3.26e-01 | 74.6% | 88.2% |
| 3411753 | 2007.2.3.1 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Flavoproteins/Phosphotyrosine protein phosphatases-like › (Phosphotyrosine protein) phosphatases II › Y_phosphatase | 0.50 | 41.0 | 2.65e-01 | 92.1% | 19.0% |
| 3999004 | 239.3.1.0 ↗ | beta barrels › Ribosomal protein L25-like › FAS1 domain › FAS1 domain | 0.50 | 44.0 | 2.87e-01 | 100.0% | 30.7% |