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OQ183418.1__WCO82133.1__vBPpSSYP_151__00151

Bact-Vir

OQ183418.1__WCO82133.1__vBPpSSYP_151__00151

Identity

Accession:
OQ183418 ↗
Kingdom:
phage

Quality

75.8 mean pLDDT

Taxonomy

Heunggongvirae› Uroviricota› Caudoviricetes› Pseudomonas_phage_vB_PpS_SYP

TaxID: 3020390

Cluster

View cluster (47 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 26-137
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6oqrA01 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.70 28.0 3.17e-01 96.4% 45.6%
1m1gB03 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.59 26.0 3.34e-01 90.2% 69.8%
1ib8A02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.55 28.0 3.36e-01 92.9% 74.6%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4518787 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.70 32.0 3.86e-01 96.4% 64.0%
3932484 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.57 28.0 3.52e-01 91.1% 79.7%
3995005 245.1.1.1 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 › RNase_PH_C 0.57 28.0 3.19e-01 86.6% 60.0%
4111597 1.1.7.17 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N 0.53 28.0 3.52e-01 79.5% 87.7%
4429352 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.53 35.0 3.82e-01 100.0% 83.3%
3222896 245.1.1.0 ↗ a+b two layers › Ribonuclease PH domain 2-like › Ribonuclease PH domain 2 › Ribonuclease PH domain 2 0.52 27.0 3.05e-01 86.6% 63.7%
3387360 1.1.7.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.50 29.0 3.30e-01 82.1% 75.3%