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OQ184949.1__WBY54298.1__X__00002
Bact-VirOQ184949.1__WBY54298.1__X__00002
Identity
- Accession:
- OQ184949 ↗
- Kingdom:
- phage
Quality
76.1
mean pLDDT
Taxonomy
TaxID: 2202559
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 48-183
Domain cluster:
rep: NC_023549.1__YP_009004248.1__CN1A_36__00036__D3-130
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF13539.12 best | Peptidase_M15_4 | 26.0 | 1.50e-05 | 51.5% | 91.2% |
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2vo9A01 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.80 | 69.0 | 6.97e-01 | 89.0% | 92.5% |
| 4mphA00 | 3.30.1380.10 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › | 0.72 | 64.0 | 5.74e-01 | 93.4% | 76.2% |
| 2d42A02 | 3.10.450.380 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 30.0 | 4.03e-01 | 82.4% | 87.7% |
| 4fxdA05 | 3.90.1600.10 | Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain | 0.57 | 34.0 | 3.63e-01 | 86.8% | 67.5% |
| 3cueB00 | 3.30.1380.20 | Alpha Beta › 2-Layer Sandwich › Muramoyl-pentapeptide Carboxypeptidase; domain 2 › Trafficking protein particle complex subunit 3 | 0.56 | 42.0 | 3.96e-01 | 89.7% | 64.1% |
| 3qf7A01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 36.0 | 2.82e-01 | 83.8% | 30.6% |
| 3f14A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.55 | 27.0 | 2.97e-01 | 91.9% | 53.6% |
| 3vhxF00 | 2.60.40.4330 | Mainly Beta › Sandwich › Immunoglobulin-like › Kinesin-like protein Kif23, Arf6-interacting domain | 0.54 | 33.0 | 3.70e-01 | 95.6% | 80.4% |
| 1pcfA00 | 2.30.31.10 | Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A | 0.53 | 24.0 | 3.23e-01 | 90.4% | 83.3% |
| 2v8qA01 | 3.30.310.80 | Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Kinase associated domain 1, KA1 | 0.52 | 31.0 | 3.69e-01 | 87.5% | 91.0% |
| 3d2lA02 | 2.20.25.110 | Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases | 0.51 | 25.0 | 3.49e-01 | 84.6% | 100.0% |
ECOD (13)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| None | — | 0.80 | 72.0 | 6.97e-01 | 94.1% | 89.2% | |
| 4861717 | 307.1.1.11 ↗ | a+b two layers › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › Hedgehog/DD-peptidase › PF31190 | 0.76 | 64.0 | 6.67e-01 | 95.6% | 96.0% |
| 5035423 | 295.1.1.0 ↗ | a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain | 0.56 | 24.0 | 2.96e-01 | 85.3% | 60.0% |
| 3938010 | 304.28.1.0 ↗ | a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain | 0.53 | 40.0 | 4.00e-01 | 83.8% | 76.4% |
| 3335487 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.53 | 42.0 | 4.02e-01 | 84.6% | 95.0% |
| 3999124 | 11.1.1.1 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Cadherin | 0.52 | 23.0 | 3.15e-01 | 89.7% | 88.3% |
| 3494737 | 7505.1.1.1 ↗ | a/b three-layered sandwiches › Kinesin-like protein KIF23 C-terminal domain › Kinesin-like protein KIF23 C-terminal domain › Kinesin-like protein KIF23 C-terminal domain › MKLP1_Arf_bdg | 0.51 | 30.0 | 3.63e-01 | 91.2% | 91.8% |
| 4114066 | 2006.1.1.11 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Hydrolase_3 | 0.50 | 39.0 | 3.29e-01 | 100.0% | 47.8% |
| 4121829 | 316.1.1.5 ↗ | a+b three layers › Nucleotidyltransferase-like › Nucleotidyltransferase › Nucleotidyltransferase › RsfS | 0.50 | 42.0 | 4.08e-01 | 94.1% | 80.6% |
| 3793375 | 213.1.1.2 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1,Hat1_N | 0.50 | 41.0 | 3.97e-01 | 86.8% | 94.7% |
| 4191800 | 3075.1.1.0 ↗ | a+b two layers › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA › ubiquitin-binding domain from PLAA | 0.50 | 20.0 | 2.91e-01 | 85.3% | 83.6% |
| 5076842 | 873.1.1.1 ↗ | a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › V4R | 0.50 | 39.0 | 3.61e-01 | 89.7% | 65.3% |
| 4961540 | 223.1.1.4 ↗ | a+b three layers › Profilin-like › sensor domains › sensor domains › IclR | 0.50 | 41.0 | 3.74e-01 | 87.5% | 98.9% |