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OQ190480.1__WDS52003.1__X__00206

Bact-Vir

OQ190480.1__WDS52003.1__X__00206

Identity

Accession:
OQ190480 ↗
Kingdom:
phage

Quality

88.2 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-39
PDB
Domain cluster: representative
CATH (61)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4llgM00 3.10.20.510 Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNA polymerase inhibitor 0.76 64.0 5.93e-01 100.0% 94.0%
3cp7A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.75 63.0 4.57e-01 100.0% 51.4%
1qysA00 3.30.1710.10 Alpha Beta › 2-Layer Sandwich › top7, de novo designed protein › top7, de novo designed protein 0.72 58.0 4.58e-01 100.0% 89.1%
4yarA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.71 57.0 4.06e-01 97.4% 29.3%
3hx1B00 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.71 57.0 4.28e-01 97.4% 99.1%
3tj8A02 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.69 55.0 4.55e-01 94.7% 81.1%
4kyzA00 3.30.70.600 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Ribosomal protein S10 0.68 55.0 3.71e-01 100.0% 89.8%
6h8oA00 3.40.1310.20 Alpha Beta › 3-Layer(aba) Sandwich › Replication Protein E1; Chain: A, › 0.68 51.0 4.02e-01 89.5% 67.4%
4lejA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.68 56.0 3.69e-01 100.0% 59.6%
3loiA01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.68 58.0 3.83e-01 100.0% 27.5%
2i44B00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.67 57.0 3.36e-01 100.0% 49.4%
3m7aA01 2.60.120.1140 Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF192 0.66 50.0 3.46e-01 86.8% 86.8%
2n59A00 2.60.40.2420 Mainly Beta › Sandwich › Immunoglobulin-like › 0.66 54.0 4.09e-01 100.0% 56.4%
1wv3A01 2.60.200.20 Mainly Beta › Sandwich › Tumour Suppressor Smad4 › 0.66 51.0 4.16e-01 89.5% 100.0%
2bbhA01 3.30.460.20 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › CorA soluble domain-like 0.66 53.0 3.67e-01 100.0% 75.5%
1flmA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 51.0 3.76e-01 100.0% 54.9%
1vhoA02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.65 50.0 4.10e-01 89.5% 75.3%
4x8iA02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.65 50.0 3.96e-01 89.5% 65.9%
5wfiA01 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.65 52.0 3.72e-01 94.7% 44.6%
7c2fB01 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.64 46.0 3.78e-01 100.0% 38.4%
5jpnB04 2.60.120.1540 Mainly Beta › Sandwich › Jelly Rolls › 0.64 53.0 3.79e-01 97.4% 36.4%
1ub4A00 2.30.30.110 Mainly Beta › Roll › SH3 type barrels. › 0.64 49.0 3.82e-01 97.4% 74.8%
2bnmA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.63 53.0 3.80e-01 100.0% 32.5%
7yj5A02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.63 46.0 3.18e-01 86.8% 26.5%
2vtfA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.63 50.0 3.99e-01 100.0% 54.9%
1gmuA01 3.30.70.790 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › UreE, C-terminal domain 0.62 47.0 4.19e-01 94.7% 86.6%
2wyrB02 2.40.30.40 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Peptidase M42, domain 2 0.62 46.0 3.73e-01 89.5% 65.9%
4r3dA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.61 51.0 3.57e-01 100.0% 94.2%
5ucoA02 3.40.47.10 Alpha Beta › 3-Layer(aba) Sandwich › Peroxisomal Thiolase; Chain A, domain 1 › Thiolase/Chalcone synthase 0.61 43.0 3.03e-01 84.2% 26.1%
2qggA01 2.40.30.60 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › RimM 0.61 47.0 3.79e-01 97.4% 60.2%
2fqpA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.61 49.0 3.79e-01 100.0% 38.9%
2w5eA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.60 49.0 4.29e-01 100.0% 58.5%
4m0wA03 2.60.120.1680 Mainly Beta › Sandwich › Jelly Rolls › 0.60 49.0 3.47e-01 100.0% 93.4%
4d7pA00 2.60.40.730 Mainly Beta › Sandwich › Immunoglobulin-like › SOR catalytic domain 0.60 46.0 3.70e-01 100.0% 56.2%
3dkqA01 2.60.120.620 Mainly Beta › Sandwich › Jelly Rolls › q2cbj1_9rhob like domain 0.60 47.0 3.16e-01 100.0% 20.3%
3tzgA00 2.40.160.150 Mainly Beta › Beta Barrel › Porin › 0.59 48.0 3.03e-01 100.0% 98.3%
1qz8A01 2.40.10.250 Mainly Beta › Beta Barrel › Thrombin, subunit H › Replicase NSP9 0.59 43.0 3.26e-01 84.2% 39.0%
2e5yA01 2.60.15.10 Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.58 48.0 3.71e-01 100.0% 40.9%
1g13A00 2.70.220.10 Mainly Beta › Distorted Sandwich › Ganglioside M2 Activator Protein; Chain: A, › Ganglioside GM2 activator 0.58 45.0 3.16e-01 100.0% 61.7%
4zrxA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 44.0 3.46e-01 100.0% 41.0%
1whmA01 2.30.30.190 Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain 0.57 42.0 3.60e-01 89.5% 100.0%
1nepA00 2.60.40.770 Mainly Beta › Sandwich › Immunoglobulin-like › 0.57 44.0 3.24e-01 100.0% 46.2%
7pjjA02 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.56 44.0 3.24e-01 97.4% 43.4%
1wh2A01 3.30.1490.40 Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › GYF domain 0.56 42.0 3.89e-01 100.0% 65.6%
1vwxB03 3.30.1430.10 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein L3; Chain: B; domain 2, › 0.56 43.0 3.25e-01 100.0% 77.2%
1odmA00 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.56 42.0 2.58e-01 100.0% 15.2%
3qdfA01 2.30.30.370 Mainly Beta › Roll › SH3 type barrels. › FAH 0.55 42.0 3.84e-01 89.5% 96.6%
1txoB00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.55 44.0 2.82e-01 100.0% 55.1%
3i7dA00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 44.0 3.05e-01 100.0% 24.2%
1ujrA01 3.30.720.50 Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › 0.54 39.0 3.33e-01 94.7% 81.9%
3r4cA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.53 36.0 2.94e-01 84.2% 92.1%
5dn6I00 2.60.15.10 Mainly Beta › Sandwich › ATP Synthase; domain 1 › F0F1 ATP synthase delta/epsilon subunit, N-terminal 0.53 44.0 3.61e-01 100.0% 50.7%
4mv2A00 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.53 41.0 2.99e-01 92.1% 30.0%
2rbkA02 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.52 45.0 3.35e-01 100.0% 75.2%
1d3yB02 3.40.1360.10 Alpha Beta › 3-Layer(aba) Sandwich › Dna Topoisomerase Vi A Subunit; Chain: A, domain 2 › 0.52 41.0 2.70e-01 100.0% 41.0%
4q0jA03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.52 44.0 3.04e-01 100.0% 55.6%
1d0nA06 3.40.20.10 Alpha Beta › 3-Layer(aba) Sandwich › Severin › Severin 0.52 41.0 3.00e-01 100.0% 30.7%
1xauA00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 3.20e-01 100.0% 56.7%
4bbyA03 3.30.465.10 Alpha Beta › 2-Layer Sandwich › Uridine Diphospho-n-acetylenolpyruvylglucosamine Reductase; domain 3 › 0.51 36.0 2.76e-01 89.5% 40.5%
1gp6A00 2.60.120.330 Mainly Beta › Sandwich › Jelly Rolls › B-lactam Antibiotic, Isopenicillin N Synthase; Chain 0.51 40.0 2.42e-01 100.0% 14.6%
3zq5A03 3.30.450.270 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PHY domain 0.51 43.0 2.91e-01 100.0% 51.0%
ECOD (49)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5080205 3115.1.1.0 a+b two layers › GP2-like › RplX-like › RplX-like 0.78 66.0 6.08e-01 97.4% 92.0%
5002387 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.72 61.0 3.68e-01 100.0% 42.5%
4957597 101.1.2.14 alpha arrays › HTH › HTH › winged helix domain › HTH_5 0.66 53.0 4.21e-01 100.0% 96.7%
3787741 376.1.1.0 few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box 0.65 47.0 4.25e-01 92.1% 55.0%
4962393 4187.1.1.2 a+b two layers › NosL/MerB-like › NosL/MerB-like › NosL/MerB-like › NosL 0.64 50.0 4.91e-01 100.0% 91.1%
3400710 379.1.1.0 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.64 49.0 4.65e-01 97.4% 70.0%
4028919 4121.1.1.2 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › MRS2-like 0.64 53.0 3.24e-01 100.0% 33.6%
2898500 7581.1.1.6 a/b three-layered sandwiches › Thiolase-like › Thiolase-like › Thiolase-like › Chal_sti_synt_C 0.63 46.0 3.15e-01 86.8% 25.5%
3254117 11.1.1.67 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF525 0.63 51.0 3.76e-01 100.0% 53.3%
3833836 109.4.1.619 alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › DYW_deaminase 0.62 51.0 3.57e-01 100.0% 87.1%
4978525 4121.1.1.1 a+b three layers › CorA soluble domain-like › CorA soluble domain-like › CorA soluble domain-like › CorA 0.62 49.0 3.06e-01 97.4% 14.1%
4963111 4.1.1.28 beta barrels › SH3 › SH3 › SH3 › BPL_C 0.62 45.0 4.38e-01 84.2% 93.3%
5038375 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.62 50.0 3.26e-01 100.0% 34.0%
4295345 4178.1.1.0 beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain 0.62 49.0 3.39e-01 100.0% 33.5%
4451053 379.1.1.3 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors › Kazal_2 0.62 46.0 4.41e-01 97.4% 70.0%
3935777 221.1.1.0 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like 0.62 45.0 3.74e-01 86.8% 88.7%
3509065 221.7.1.3 a+b two layers › beta-Grasp › E2-binding domain of E1 › E2-binding domain of E1 › UAE_UbL 0.61 49.0 3.98e-01 100.0% 57.6%
5003022 219.1.1.13 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Transglut_core 0.61 46.0 2.89e-01 92.1% 42.7%
3875549 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.60 49.0 3.20e-01 100.0% 35.4%
4947818 224.1.1.0 a+b three layers › Gelsolin-like › Gelsolin-like › Gelsolin-like 0.60 45.0 3.68e-01 100.0% 40.0%
4139949 379.1.1.0 few secondary structure elements › Kazal-type serine protease inhibitors-like › Kazal-type serine protease inhibitors › Kazal-type serine protease inhibitors 0.60 45.0 4.52e-01 94.7% 87.5%
3781851 5050.1.1.32 alpha complex topology › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Major facilitator superfamily (MFS) general substrate transporter › Acatn 0.60 47.0 2.99e-01 100.0% 15.5%
3211414 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 47.0 3.49e-01 94.7% 48.7%
5051356 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.60 40.0 3.17e-01 71.1% 76.5%
3495764 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.59 48.0 3.20e-01 100.0% 37.8%
4129138 10.12.1.53 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy_3 0.59 49.0 3.10e-01 100.0% 16.5%
4585224 2492.1.1.0 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like 0.58 49.0 3.76e-01 100.0% 57.1%
3621341 382.1.1.0 few secondary structure elements › Snake toxin-like › Snake toxin-like › Snake toxin-like 0.58 46.0 3.93e-01 100.0% 94.7%
3254631 4357.1.1.1 beta barrels › WWE domain › WWE domain › WWE domain › WWE 0.58 42.0 3.77e-01 89.5% 96.9%
3258276 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.58 46.0 2.96e-01 100.0% 32.0%
3713554 4178.1.1.0 beta sandwiches › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain › Putative glucosidase YicI, C-terminal domain 0.58 45.0 2.98e-01 100.0% 29.8%
3267853 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.57 46.0 2.96e-01 100.0% 31.4%
3310681 10.32.1.192 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like › C-JID 0.57 44.0 2.95e-01 100.0% 46.8%
3879988 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.57 46.0 2.99e-01 100.0% 32.6%
3328959 207.1.1.37 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats › C-JID 0.57 43.0 2.65e-01 100.0% 29.8%
3962617 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.56 44.0 2.87e-01 97.4% 33.2%
4612383 1.1.1.0 beta barrels › cradle loop barrel › RIFT-related › acid protease 0.56 44.0 3.01e-01 94.7% 22.5%
4015639 10.12.1.0 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix 0.56 42.0 2.57e-01 100.0% 15.3%
3907235 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.56 44.0 2.84e-01 100.0% 31.1%
2514619 4081.1.1.2 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT 0.55 44.0 2.82e-01 100.0% 29.2%
4488199 11.1.1.1249 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › PF27332 0.55 44.0 3.09e-01 100.0% 46.6%
3268522 221.1.1.46 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › USP7_ICP0_bdg 0.55 40.0 3.08e-01 97.4% 30.0%
3265018 221.1.1.6 a+b two layers › beta-Grasp › Ubiquitin-related › Ubiquitin-like › RA 0.53 38.0 3.09e-01 97.4% 33.7%
3301989 10.12.1.16 beta sandwiches › jelly-roll › Double-stranded beta-helix › Double-stranded beta-helix › 2OG-FeII_Oxy 0.53 41.0 2.56e-01 100.0% 19.3%
4418856 223.2.1.23 a+b three layers › Profilin-like › profilin-like › profilin-like › NPR3 0.52 42.0 2.77e-01 100.0% 47.9%
3571103 4081.1.1.8 beta sandwiches › Baculovirus p35 protein-related › Baculovirus p35 protein-related › Baculovirus p35 protein-related › VIT_2 0.52 40.0 2.63e-01 94.7% 27.9%
3194849 7508.1.1.0 a/b three-layered sandwiches › O-glucosyltransferase rumi N-terminal domain › O-glucosyltransferase rumi N-terminal domain › O-glucosyltransferase rumi N-terminal domain 0.52 43.0 2.79e-01 100.0% 24.5%
3340161 223.1.1.1 a+b three layers › Profilin-like › sensor domains › sensor domains › PHY 0.52 37.0 2.55e-01 86.8% 90.8%
3164474 3012.1.1.4 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Hydrolase_3 0.51 41.0 3.17e-01 100.0% 50.5%