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OQ198717.1__WEU69743.1__X__00003

Bact-Vir

OQ198717.1__WEU69743.1__X__00003

Identity

Accession:
OQ198717 ↗
Kingdom:
phage

Quality

90.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 6-37
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3td9A02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.73 58.0 3.84e-01 100.0% 27.8%
4n0qA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 54.0 3.69e-01 100.0% 29.4%
4q6bA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.70 56.0 3.80e-01 100.0% 24.6%
4dnyA00 2.60.120.1230 Mainly Beta › Sandwich › Jelly Rolls › 0.63 47.0 3.52e-01 100.0% 62.4%
4gnrA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.63 47.0 3.25e-01 100.0% 29.9%
2ci8A01 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.61 44.0 4.09e-01 100.0% 89.3%
1uwvA03 2.40.50.1070 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.60 42.0 2.90e-01 78.1% 29.9%
3c4nA02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.60 44.0 3.21e-01 100.0% 57.6%
5tz8A01 3.90.550.10 Alpha Beta › Alpha-Beta Complex › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A › Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 0.60 46.0 2.85e-01 96.9% 81.5%
4khbC00 2.30.29.210 Mainly Beta › Roll › PH-domain like › FACT complex subunit Spt16p/Cdc68p 0.60 42.0 3.15e-01 84.4% 27.4%
1s7jA02 3.10.310.10 Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 0.60 42.0 3.04e-01 96.9% 48.5%
1qhuA01 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.59 44.0 2.88e-01 93.8% 78.7%
1d2mA02 3.30.2060.10 Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain 0.59 42.0 3.69e-01 100.0% 46.4%
3hjhA02 3.30.2060.10 Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain 0.58 44.0 3.50e-01 100.0% 37.2%
1fblA02 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.57 40.0 2.70e-01 93.8% 84.3%
1ng4A02 3.30.9.10 Alpha Beta › 2-Layer Sandwich › D-Amino Acid Oxidase; Chain A, domain 2 › D-Amino Acid Oxidase, subunit A, domain 2 0.56 44.0 3.07e-01 100.0% 65.0%
3vmaA03 3.30.2060.10 Alpha Beta › 2-Layer Sandwich › Penicillin-binding protein 1b fold › Penicillin-binding protein 1b domain 0.56 41.0 3.30e-01 100.0% 44.4%
3oymA01 1.10.340.70 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › 0.56 46.0 3.41e-01 100.0% 36.6%
4o2zA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.53 39.0 2.61e-01 96.9% 17.6%
3k1lA01 3.30.457.40 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.53 39.0 3.12e-01 100.0% 59.8%
2rfrA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 39.0 2.66e-01 96.9% 55.2%
2it9A00 2.30.31.10 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Transcriptional Coactivator Pc4; Chain A 0.53 36.0 2.66e-01 84.4% 35.0%
ECOD (66)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4821342 3176.1.1.1 alpha duplicates or obligate multimers › Head fiber protein gp8.5 fibrous portion › Head fiber protein gp8.5 fibrous portion › Head fiber protein gp8.5 fibrous portion › Phage_head_fibr 0.93 82.0 7.78e-01 100.0% 84.2%
3644667 7516.1.1.41 a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Glucan_synthase 0.82 71.0 4.01e-01 100.0% 15.2%
4348265 2007.1.2.13 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 0.76 62.0 3.99e-01 100.0% 26.7%
3998974 391.1.2.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.74 56.0 5.52e-01 84.4% 82.9%
3579158 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.72 53.0 5.27e-01 84.4% 80.0%
3385462 2007.1.2.13 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 0.72 57.0 3.74e-01 100.0% 26.4%
4004053 7502.1.1.0 a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS 0.70 55.0 4.15e-01 100.0% 66.3%
4040104 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.70 53.0 3.25e-01 100.0% 13.0%
3944998 4212.1.1.2 beta barrels › FimD N-terminal domain-like › FimD N-terminal domain-like › FimD N-terminal domain-like › PF30442 0.69 49.0 3.41e-01 75.0% 40.0%
3630470 391.1.2.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.69 49.0 4.87e-01 78.1% 82.9%
4382986 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.68 53.0 3.27e-01 100.0% 14.1%
4858324 391.1.1.8 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › VWF 0.68 49.0 4.84e-01 81.2% 75.7%
4970030 2007.1.2.13 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › Peripla_BP_6 0.68 55.0 3.70e-01 100.0% 47.6%
3890184 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.67 48.0 4.79e-01 78.1% 82.9%
3222229 247.1.1.1 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B 0.66 54.0 3.38e-01 100.0% 20.0%
4149520 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.66 49.0 3.01e-01 100.0% 12.9%
4083417 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.66 50.0 3.12e-01 100.0% 25.7%
3778082 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.65 49.0 4.98e-01 81.2% 96.7%
3929201 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.65 47.0 4.17e-01 96.9% 53.1%
3899335 356.1.1.2 few secondary structure elements › PMP inhibitors › PMP inhibitors › PMP inhibitors › VWF 0.63 46.0 4.58e-01 78.1% 82.9%
3524959 391.1.1.8 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › VWF 0.63 46.0 4.56e-01 78.1% 82.9%
4237852 2004.1.1.159 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Mur_ligase_M 0.63 47.0 2.94e-01 100.0% 15.0%
5047179 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.62 45.0 2.81e-01 100.0% 36.2%
3367433 244.1.1.26 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD-linked reductases-C › FAD-linked reductases-C › GUB_WAK_bind 0.62 51.0 3.26e-01 100.0% 20.0%
3338030 4.1.1.282 beta barrels › SH3 › SH3 › SH3 › GUB_WAK_bind 0.62 51.0 3.66e-01 100.0% 32.7%
5071037 2004.1.1.1221 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27431 0.62 46.0 2.54e-01 100.0% 5.5%
3672185 304.59.1.4 a+b two layers › Alpha-beta plaits › MTH889-like › MTH889-like › GUB_WAK_bind 0.62 52.0 3.26e-01 100.0% 17.9%
3854692 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.62 44.0 3.34e-01 84.4% 30.5%
5048316 2004.1.1.1221 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PF27431 0.61 46.0 2.65e-01 100.0% 7.9%
3886530 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.61 44.0 4.45e-01 81.2% 90.0%
4997234 2004.1.1.554 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_inter 0.61 45.0 2.52e-01 100.0% 5.5%
3514491 5.1.4.242 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PEP5_VPS11_N 0.61 46.0 2.65e-01 93.8% 64.1%
5001934 2004.1.1.554 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_inter 0.61 44.0 2.55e-01 100.0% 7.8%
3721249 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.61 44.0 3.91e-01 84.4% 52.7%
3560927 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.60 44.0 4.38e-01 81.2% 80.0%
3694093 2007.1.1.32 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › HET 0.60 46.0 2.98e-01 100.0% 30.8%
3416800 391.1.1.12 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › FnI_RECK 0.60 42.0 4.25e-01 81.2% 74.3%
3897076 356.1.1.1 few secondary structure elements › PMP inhibitors › PMP inhibitors › PMP inhibitors › Pacifastin_I 0.60 43.0 4.36e-01 84.4% 93.3%
None 0.60 44.0 2.54e-01 100.0% 7.7%
3404770 5.1.4.175 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_IFT122_2nd 0.60 46.0 2.77e-01 93.8% 27.0%
4293142 2004.1.1.554 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_inter 0.60 45.0 2.62e-01 100.0% 8.9%
4256884 506.2.1.2 beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter 0.60 44.0 3.48e-01 100.0% 34.4%
2539927 506.2.1.2 beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter 0.59 45.0 3.48e-01 100.0% 34.8%
None 0.59 45.0 2.46e-01 100.0% 3.8%
4319170 2004.1.1.554 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_inter 0.59 44.0 2.61e-01 100.0% 8.5%
3422087 4.1.1.282 beta barrels › SH3 › SH3 › SH3 › GUB_WAK_bind 0.59 49.0 3.73e-01 100.0% 41.0%
4335575 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.59 45.0 2.44e-01 100.0% 3.5%
3988221 2004.1.1.554 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_inter 0.59 44.0 2.59e-01 100.0% 8.8%
None 0.59 42.0 2.78e-01 100.0% 15.7%
3387556 506.2.1.2 beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter 0.59 44.0 3.46e-01 100.0% 35.6%
3682725 304.28.1.32 a+b two layers › Alpha-beta plaits › Ferredoxin domains in multidrug efflux transporter › Multidrug efflux transporter AcrB pore domain › GUB_WAK_bind 0.58 48.0 3.13e-01 100.0% 21.3%
4135015 506.2.1.2 beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter 0.58 43.0 3.41e-01 100.0% 35.6%
3965920 506.2.1.2 beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter 0.58 43.0 3.38e-01 100.0% 35.6%
3781211 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.57 47.0 3.38e-01 100.0% 41.0%
None 0.57 42.0 2.29e-01 100.0% 3.8%
None 0.57 41.0 2.36e-01 100.0% 7.2%
4489808 506.2.1.2 beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter 0.57 42.0 3.38e-01 100.0% 37.6%
4405609 506.2.1.2 beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter 0.56 44.0 3.47e-01 100.0% 35.6%
3587801 2004.1.1.554 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrB_inter 0.56 42.0 2.47e-01 100.0% 8.8%
5041470 2003.6.1.1 a/b three-layered sandwiches › Rossmann-like › Ribokinase-like › Ribokinase-like › PfkB 0.56 40.0 2.49e-01 100.0% 16.2%
None 0.55 37.0 2.23e-01 100.0% 8.4%
4961462 5.1.4.40 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › PQQ_2 0.55 43.0 2.60e-01 100.0% 28.2%
3839366 506.2.1.2 beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UvrB_inter 0.54 39.0 3.14e-01 100.0% 35.6%
4632179 506.2.1.1 beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UB2H 0.53 39.0 3.09e-01 100.0% 44.2%
3164741 506.2.1.1 beta meanders › Colicin E3 ribonuclease domain-like › UvrB interaction domain › UvrB interaction domain › UB2H 0.52 37.0 3.15e-01 100.0% 52.5%
4973867 314.1.1.0 a+b three layers › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases › Class II aaRS and biotin synthetases 0.51 36.0 2.43e-01 84.4% 83.9%