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OQ198717.1__WEU69778.1__X__00038

Bact-Vir

OQ198717.1__WEU69778.1__X__00038

Identity

Accession:
OQ198717 ↗
Kingdom:
phage

Quality

83.8 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 6-73
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF07927.18 best HicA_toxin 32.0 1.50e-07 89.7% 84.5%
CATH (38)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5yrzB00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.87 65.0 6.97e-01 77.9% 94.8%
1whzA00 3.30.920.30 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Hypothetical protein. 0.84 66.0 6.62e-01 83.8% 92.8%
4hs5A00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.69 52.0 4.54e-01 82.4% 86.7%
3hdoA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.69 50.0 4.08e-01 77.9% 59.2%
3p8aA02 2.60.40.4320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.68 46.0 4.23e-01 73.5% 53.3%
4jpdA00 3.30.920.10 Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY 0.68 51.0 4.41e-01 82.4% 86.2%
1lc5A01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.67 49.0 4.02e-01 77.9% 63.2%
6g6qA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.67 42.0 3.31e-01 75.0% 30.6%
3eucA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.65 45.0 3.62e-01 73.5% 55.5%
1ye8A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.64 48.0 3.70e-01 83.8% 56.7%
4z04A00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.63 50.0 4.14e-01 86.8% 60.5%
4py5A01 3.30.310.10 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › TATA-Binding Protein 0.63 48.0 4.79e-01 82.4% 80.6%
3madA02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.63 45.0 3.74e-01 77.9% 60.3%
1ecsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.63 51.0 4.28e-01 89.7% 56.7%
2hzmG01 3.30.310.180 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.62 48.0 4.04e-01 83.8% 62.6%
5k19A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.61 43.0 2.73e-01 75.0% 17.0%
2in5A00 2.40.360.10 Mainly Beta › Beta Barrel › YmcC-like fold › YmcC-like 0.60 45.0 3.22e-01 77.9% 81.0%
3lzhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 42.0 3.87e-01 73.5% 98.9%
6ctzA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.59 41.0 3.74e-01 73.5% 94.6%
2pulB01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 41.0 3.80e-01 75.0% 91.3%
5iqaA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 41.0 3.72e-01 73.5% 97.8%
1y13A00 3.30.479.10 Alpha Beta › 2-Layer Sandwich › Tetrahydropterin Synthase; Chain A › 6-pyruvoyl tetrahydropterin synthase/QueD 0.57 41.0 3.13e-01 86.8% 31.9%
3havA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.57 40.0 3.72e-01 75.0% 91.0%
3oyyA02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.56 41.0 4.24e-01 76.5% 93.8%
2yf0A01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.56 38.0 3.55e-01 70.6% 71.3%
4q66D01 6.20.120.50 Special › Other non-globular › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 37.0 3.64e-01 73.5% 64.4%
2o7iA01 3.40.190.10 Alpha Beta › 3-Layer(aba) Sandwich › D-Maltodextrin-Binding Protein; domain 2 › Periplasmic binding protein-like II 0.54 43.0 3.28e-01 88.2% 84.2%
3rp7A01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.54 38.0 2.95e-01 76.5% 73.2%
3tssA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.54 36.0 3.61e-01 70.6% 91.5%
1tj6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.54 40.0 3.48e-01 83.8% 83.5%
3uh9B00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 42.0 3.52e-01 91.2% 52.6%
3d0fA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.53 37.0 3.63e-01 72.1% 97.3%
1egxA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 39.0 3.39e-01 83.8% 81.7%
4oonA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 39.0 3.47e-01 82.4% 99.0%
2vouB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 38.0 2.66e-01 79.4% 87.1%
3kbgA02 2.40.50.740 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Ribosomal protein S4, central domain 0.51 37.0 4.07e-01 76.5% 98.1%
3udfA03 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.51 39.0 3.49e-01 82.4% 100.0%
2dgyA01 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.50 35.0 3.36e-01 73.5% 83.5%
ECOD (42)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3257938 330.7.1.2 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.89 69.0 7.30e-01 80.9% 96.7%
5027607 330.7.1.2 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.87 70.0 6.80e-01 85.3% 89.3%
5002984 330.7.1.2 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.87 70.0 6.98e-01 85.3% 94.3%
4947543 330.7.1.2 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.85 67.0 6.57e-01 85.3% 89.2%
5829 330.7.1.2 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.84 66.0 6.59e-01 83.8% 91.4%
5002760 330.7.1.2 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.83 67.0 6.66e-01 86.8% 95.7%
5055849 330.7.1.2 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain › HicA_toxin 0.83 64.0 6.55e-01 82.4% 95.4%
5075316 330.7.1.0 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain 0.80 63.0 6.33e-01 85.3% 95.7%
4940177 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.68 46.0 4.65e-01 72.1% 81.4%
5036086 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.64 44.0 4.26e-01 73.5% 98.8%
4929392 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.63 48.0 4.37e-01 80.9% 67.8%
5051148 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 45.0 4.71e-01 73.5% 100.0%
4325664 330.7.1.0 a+b two layers › dsRBD-like › PI-Pfui intein middle domain › PI-Pfui intein middle domain 0.62 44.0 4.60e-01 76.5% 90.0%
3645374 64.1.1.8 beta meanders › WW domain-like › WW domain › WW domain › DUF7028 0.62 42.0 4.18e-01 77.9% 68.6%
3450480 5.1.4.297 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, NBCH_WD40 0.60 42.0 2.86e-01 73.5% 22.0%
3387155 298.1.1.24 a+b two layers › FwdE/GAPDH domain-like › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain › GFO_IDH_MocA_C3 0.60 50.0 3.67e-01 94.1% 60.0%
5001380 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.60 47.0 4.54e-01 89.7% 100.0%
4981525 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.60 45.0 4.37e-01 83.8% 79.7%
3430041 5.1.10.3 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › DUF295 0.59 41.0 3.60e-01 73.5% 68.6%
4113537 2.1.1.327 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF27401 0.58 40.0 4.15e-01 72.1% 93.8%
3514143 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.57 40.0 3.45e-01 72.1% 91.4%
4357143 2003.1.3.1 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Nucleotide-binding domain › DAO 0.57 40.0 2.59e-01 76.5% 90.7%
4944335 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.57 43.0 3.90e-01 82.4% 68.8%
3839435 330.9.1.0 a+b two layers › dsRBD-like › C-terminal domain in LINE-1 ORF1p › C-terminal domain in LINE-1 ORF1p 0.56 45.0 4.41e-01 94.1% 86.7%
3722737 11.1.1.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like 0.56 38.0 2.81e-01 73.5% 28.5%
4459163 2.4.1.1 beta barrels › OB-fold › MOP-like › MOP-like › TOBE 0.56 41.0 3.28e-01 75.0% 98.4%
3647627 2484.1.1.21 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › BcrAD_BadFG 0.56 38.0 3.03e-01 72.1% 98.7%
3496646 5.1.5.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 0.55 39.0 2.47e-01 75.0% 14.7%
3775592 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.54 46.0 2.48e-01 100.0% 42.9%
3964178 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.54 37.0 3.02e-01 72.1% 91.1%
3646861 206.1.1.74 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, PK_Tyr_Ser-Thr 0.54 38.0 2.71e-01 73.5% 32.2%
3515664 5.1.4.34 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup88 0.54 38.0 2.25e-01 73.5% 77.0%
3284357 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.54 38.0 3.11e-01 75.0% 96.2%
4955607 3435.1.1.0 a+b two layers › Recombination-associated protein rdgC › Recombination-associated protein rdgC › Recombination-associated protein rdgC 0.53 40.0 2.99e-01 86.8% 47.9%
4488000 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.53 41.0 3.52e-01 86.8% 82.6%
3715045 292.2.1.0 a+b two layers › RIP/Polo-box domain › Polo-box domain › Polo-box domain 0.53 36.0 3.62e-01 72.1% 80.0%
3334148 3164.1.1.2 few secondary structure elements › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein › Zinc-binding domain in Junin virus envelope glycoprotein › SWIM 0.52 37.0 3.56e-01 76.5% 63.7%
4441750 2.4.1.7 beta barrels › OB-fold › MOP-like › MOP-like › OB_MalK 0.52 36.0 3.89e-01 72.1% 96.4%
1884741 4.1.1.130 beta barrels › SH3 › SH3 › SH3 › SH3_19 0.51 41.0 4.38e-01 98.5% 100.0%
5014724 295.1.1.51 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › FtsQ_DivIB_C 0.51 38.0 3.32e-01 79.4% 92.0%
3903213 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.50 40.0 3.03e-01 89.7% 42.9%
4418620 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.50 41.0 2.27e-01 92.6% 7.3%
D2 high residues 97-144
PDB
Domain cluster: representative
CATH (7)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4mmoA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.68 47.0 3.22e-01 72.9% 86.8%
4amwA01 2.60.40.1760 Mainly Beta › Sandwich › Immunoglobulin-like › glycosyl hydrolase (family 31) 0.65 44.0 2.70e-01 70.8% 24.2%
2f0aA00 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.62 42.0 3.50e-01 72.9% 82.4%
3e56A00 6.20.180.10 Special › Other non-globular › Ubiquitin-like (UB roll) › 0.56 41.0 3.70e-01 83.3% 54.7%
5k8mA02 3.30.70.360 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.56 46.0 3.51e-01 100.0% 99.2%
4ly4A00 3.20.20.370 Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycoside hydrolase/deacetylase 0.54 43.0 2.70e-01 87.5% 94.5%
5e5nA02 1.10.1240.100 Mainly Alpha › Orthogonal Bundle › Methyltransferase, Methionine Synthase (B12-binding Domains); Chain A, domain 1 › 0.51 40.0 3.12e-01 83.3% 85.7%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3995723 11.1.1.54 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CBM_21 0.64 46.0 3.35e-01 77.1% 74.8%
4944179 304.43.1.0 a+b two layers › Alpha-beta plaits › Hypothetical protein TT1725 › Hypothetical protein TT1725 0.59 47.0 3.84e-01 93.8% 100.0%
3632874 226.1.1.0 a+b two layers › POZ domain › POZ domain › POZ domain 0.57 48.0 3.34e-01 95.8% 60.3%
3613090 7.1.1.18 beta barrels › PDZ domain › PDZ domain › PDZ domain › DUF7761 0.56 40.0 3.05e-01 77.1% 73.3%
3785048 5.1.11.1 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 9-bladed › eIF2A 0.55 43.0 2.51e-01 87.5% 34.0%
3651654 3364.1.1.2 few secondary structure elements › Epidermal patterning factor-like protein 9 › Epidermal patterning factor-like protein 9 › Epidermal patterning factor-like protein 9 › EPF 0.54 36.0 3.24e-01 70.8% 52.9%
3575284 220.1.1.5 beta barrels › PH domain-like › PH domain-like › PH domain-like › PID 0.51 37.0 3.20e-01 83.3% 52.9%