Back to structures

OQ198717.1__WEU69828.1__X__00088

Bact-Vir

OQ198717.1__WEU69828.1__X__00088

Identity

Accession:
OQ198717 ↗
Kingdom:
phage

Quality

96.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-48
PDB
Domain cluster: representative
CATH (40)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4b9kE00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.72 50.0 4.16e-01 100.0% 40.7%
1o70A02 2.30.180.10 Mainly Beta › Roll › FAS1 domain › FAS1 domain 0.68 59.0 4.14e-01 100.0% 70.5%
2x9aA00 2.30.27.10 Mainly Beta › Roll › Phage FD Coat Protein, Membrane penetration domain › Phage FD Coat Protein,Membrane penetration domain 0.68 56.0 5.16e-01 91.5% 83.6%
1g3pA02 3.90.450.1 Alpha Beta › Alpha-Beta Complex › Minor Coat Protein; domain 2 › Minor Coat Protein; Domain 2 0.68 55.0 4.25e-01 89.4% 56.7%
1b3qA04 2.40.50.180 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › CheA-289, Domain 4 0.66 49.0 4.50e-01 80.9% 95.2%
3oymA01 1.10.340.70 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › 0.66 45.0 3.61e-01 72.3% 63.4%
2ra9A01 3.10.540.10 Alpha Beta › Roll › duf1285 like fold › duf1285 like domain 0.66 52.0 4.94e-01 91.5% 74.1%
2cs7A00 3.10.50.90 Alpha Beta › Roll › Chitinase A; domain 3 › 0.65 47.0 4.54e-01 93.6% 69.1%
3kioC01 2.40.128.680 Mainly Beta › Beta Barrel › Lipocalin › 0.64 54.0 4.43e-01 100.0% 80.6%
3u9sE04 3.30.700.40 Alpha Beta › 2-Layer Sandwich › Glycoprotein, Type 4 Pilin › 0.64 46.0 3.44e-01 78.7% 89.6%
3pufL00 2.40.128.680 Mainly Beta › Beta Barrel › Lipocalin › 0.64 53.0 4.14e-01 100.0% 62.9%
1dq3A02 3.30.160.90 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.63 43.0 3.74e-01 72.3% 63.2%
5eupA00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.63 49.0 3.67e-01 100.0% 34.2%
1qhuA01 2.110.10.10 Mainly Beta › 4 Propeller › Hemopexin › Hemopexin-like domain 0.62 45.0 3.04e-01 80.9% 20.2%
1vpkA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.61 41.0 3.06e-01 87.2% 27.5%
2rdgA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.61 44.0 3.91e-01 78.7% 94.4%
4yarA02 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.60 42.0 3.18e-01 74.5% 80.5%
4omfB02 3.10.450.750 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 43.0 4.33e-01 91.5% 78.7%
4o2zA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 40.0 2.85e-01 72.3% 38.6%
4uyiA00 3.30.710.10 Alpha Beta › 2-Layer Sandwich › Potassium Channel Kv1.1; Chain A › Potassium Channel Kv1.1; Chain A 0.57 48.0 3.61e-01 100.0% 37.8%
4akgA12 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.57 46.0 3.49e-01 93.6% 76.9%
6ptrB01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.56 39.0 3.01e-01 89.4% 31.0%
1x43A01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 44.0 4.13e-01 95.7% 80.6%
3na2A00 3.40.1570.20 Alpha Beta › 3-Layer(aba) Sandwich › Heme iron utilization protein-like fold › 0.54 42.0 3.21e-01 95.7% 59.4%
5jldA02 3.40.50.620 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › HUPs 0.54 40.0 2.65e-01 87.2% 57.6%
2m3xC02 2.40.10.360 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.54 37.0 3.33e-01 72.3% 53.6%
1br2A04 1.20.58.530 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.53 40.0 2.91e-01 91.5% 85.0%
1nztA01 3.30.230.20 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › lpxc deacetylase, domain 1 0.52 42.0 3.30e-01 97.9% 50.4%
3mxnB00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.52 44.0 3.29e-01 100.0% 95.4%
1xovA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.52 41.0 3.67e-01 91.5% 66.7%
4fd0A01 2.60.40.3630 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 38.0 3.37e-01 87.2% 64.6%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.52 40.0 3.84e-01 95.7% 71.7%
3payB02 2.60.40.2090 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 41.0 3.05e-01 93.6% 45.5%
4qa8A00 2.50.20.20 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › 0.51 41.0 2.72e-01 91.5% 79.5%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 40.0 3.70e-01 95.7% 75.0%
1kq1H00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.51 42.0 3.76e-01 95.7% 65.2%
6icmD00 3.10.20.30 Alpha Beta › Roll › Ubiquitin-like (UB roll) › Beta-grasp domain 0.51 42.0 3.59e-01 100.0% 95.4%
2yyzA02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.51 41.0 3.93e-01 93.6% 81.0%
2fhdA02 2.30.30.810 Mainly Beta › Roll › SH3 type barrels. › 0.51 39.0 3.58e-01 95.7% 75.0%
3f0zA01 3.30.310.260 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › 0.51 40.0 3.15e-01 93.6% 51.8%
ECOD (53)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3973710 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.76 56.0 3.36e-01 100.0% 12.3%
3822726 5.1.4.550 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 0.71 51.0 3.11e-01 100.0% 12.2%
3422087 4.1.1.282 beta barrels › SH3 › SH3 › SH3 › GUB_WAK_bind 0.69 47.0 3.91e-01 70.2% 60.2%
4377808 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.69 53.0 3.85e-01 85.1% 47.4%
5051640 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.68 51.0 3.67e-01 85.1% 45.5%
4949981 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.68 53.0 3.92e-01 85.1% 46.4%
4480144 129.1.1.2 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 3HCDH 0.67 46.0 3.35e-01 72.3% 60.0%
3302115 5.1.3.6 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.67 45.0 2.79e-01 72.3% 16.7%
3630470 391.1.2.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › VWC domain-related 0.66 42.0 4.76e-01 97.9% 85.7%
4927009 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.66 50.0 3.64e-01 85.1% 53.6%
1030850 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.66 49.0 4.49e-01 83.0% 93.8%
1003772 3534.1.1.1 beta barrels › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › DUF1285_N 0.66 52.0 4.90e-01 91.5% 72.7%
4930200 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.65 50.0 3.67e-01 85.1% 44.6%
1118859 59.1.2.1 beta complex topology › triple barrel › triple barrel › RNase H2 subunits B and C › RNase_H2_suC 0.65 55.0 4.04e-01 100.0% 64.3%
5020421 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.65 50.0 3.65e-01 85.1% 47.7%
5016329 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.65 49.0 4.36e-01 85.1% 88.6%
3883359 59.1.2.1 beta complex topology › triple barrel › triple barrel › RNase H2 subunits B and C › RNase_H2_suC 0.64 55.0 4.14e-01 100.0% 67.2%
5041484 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.64 48.0 3.58e-01 85.1% 48.9%
5048597 4333.1.1.2 a+b complex topology › DNA methylase specificity domain › DNA methylase specificity domain › DNA methylase specificity domain › TaqI_C 0.64 44.0 2.65e-01 72.3% 26.3%
3886530 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.63 37.0 4.24e-01 72.3% 90.0%
3524959 391.1.1.8 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › VWF 0.63 39.0 4.33e-01 100.0% 82.9%
3854692 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.63 39.0 3.11e-01 100.0% 30.5%
3739664 247.1.1.38 a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › CPSF73-100_C 0.62 42.0 3.75e-01 70.2% 51.4%
3999634 9.3.1.0 beta barrels › Lipocalins/Streptavidin › Quinohemoprotein amine dehydrogenase A chain, domain 3-like › Quinohemoprotein amine dehydrogenase A chain, domain 3-like 0.62 52.0 4.44e-01 100.0% 77.6%
3791863 5.1.4.258 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › RCC1, RCC1_2 0.62 52.0 3.13e-01 100.0% 16.7%
3890184 391.1.1.0 few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module 0.61 39.0 4.37e-01 100.0% 85.7%
3900629 101.1.8.0 alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.61 48.0 3.66e-01 93.6% 40.8%
4174179 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.60 44.0 4.42e-01 91.5% 80.0%
1380293 207.6.1.1 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Serralysin-like metalloprotease-C › Serralysin-like metalloprotease-C › HemolysinCabind 0.60 47.0 3.54e-01 89.4% 69.8%
4971847 2003.1.10.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.59 48.0 4.04e-01 93.6% 69.4%
3968327 3534.1.1.1 beta barrels › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › Pfam PF06938 (DUF1285) › DUF1285_N 0.59 48.0 3.94e-01 89.4% 96.5%
3601825 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.59 49.0 3.75e-01 95.7% 60.9%
3990000 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.58 46.0 4.41e-01 91.5% 76.4%
3927186 101.1.1.76 alpha arrays › HTH › HTH › Three-helical HTH › Integrase_H2C2 0.57 39.0 3.28e-01 72.3% 73.3%
1312358 2004.1.1.183 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_9 0.57 46.0 3.29e-01 93.6% 59.2%
5007113 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.57 48.0 3.58e-01 100.0% 56.9%
1413813 4.8.1.5 beta barrels › SH3 › Chromo domain-like › Chromo domain-like › LytTR 0.57 45.0 4.30e-01 89.4% 74.5%
3702659 2.1.1.92 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DNA_pol_D_N 0.57 48.0 3.55e-01 100.0% 74.4%
3575760 2004.1.1.183 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_9 0.56 45.0 3.14e-01 93.6% 52.0%
3280230 4019.1.1.1 alpha complex topology › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › alpha-helical domain in beta-lactamase/transpeptidase-like proteins › Beta-lactamase 0.56 42.0 2.69e-01 95.7% 81.8%
4988734 2.10.1.1 beta barrels › OB-fold › CheW › CheW › CheW 0.55 46.0 3.51e-01 97.9% 96.6%
3925708 2004.1.1.183 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_9 0.55 45.0 3.25e-01 93.6% 65.0%
3721249 101.1.9.0 alpha arrays › HTH › HTH › Putative DNA-binding domain 0.55 40.0 3.81e-01 78.7% 87.3%
4478186 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.54 38.0 3.95e-01 93.6% 80.0%
3707702 2004.1.1.183 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_9 0.54 43.0 3.12e-01 93.6% 60.7%
5025312 169.1.1.1 alpha complex topology › Aldehyde ferredoxin oxidoreductase-C › Aldehyde ferredoxin oxidoreductase-C › Aldehyde ferredoxin oxidoreductase-C › AFOR_C 0.54 37.0 2.23e-01 74.5% 36.0%
4100435 230.1.1.3 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS 0.53 44.0 3.18e-01 95.7% 58.6%
3711499 2004.1.1.183 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_9 0.52 40.0 2.85e-01 93.6% 50.6%
4969727 230.1.1.3 a+b two layers › T-fold › Tetrahydrobiopterin biosynthesis enzymes-like › Tetrahydrobiopterin biosynthesis enzymes-like › PTPS 0.52 42.0 2.99e-01 93.6% 55.2%
4660084 4.1.1.97 beta barrels › SH3 › SH3 › SH3 › DUF150_C 0.52 39.0 3.54e-01 93.6% 59.4%
3416069 331.1.1.0 a+b two layers › TBP-like › TATA-box binding protein-like › TATA-box binding protein-like 0.52 41.0 3.67e-01 89.4% 72.9%
3626089 7579.1.1.3 a/b three-layered sandwiches › alpha/beta-Hydrolases › alpha/beta-Hydrolases › alpha/beta-Hydrolases › Peptidase_S9 0.51 42.0 2.35e-01 100.0% 7.2%
3781211 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.51 45.0 3.48e-01 100.0% 79.0%