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OQ198718.1__WEY17549.1__X__00031
Bact-VirOQ198718.1__WEY17549.1__X__00031
Identity
- Accession:
- OQ198718 ↗
- Kingdom:
- phage
Quality
86.3
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Crassvirales›
Steigviridae›
Kolpuevirus›
Kolpuevirus_frurule
TaxID: 3430216
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-13_103-144
Domain cluster:
representative
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2af6A01 | 3.30.70.3180 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.93 | 86.0 | 6.30e-01 | 100.0% | 60.3% |
| 1kq4A00 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.93 | 86.0 | 5.61e-01 | 100.0% | 57.6% |
| 2cfaA01 | 3.30.1360.170 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › | 0.91 | 84.0 | 5.99e-01 | 100.0% | 42.4% |
| 2xppA00 | 1.20.930.10 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › Conserved domain common to transcription factors TFIIS, elongin A, CRSP70 | 0.63 | 54.0 | 4.03e-01 | 96.3% | 70.8% |
| 3rk6A00 | 1.25.40.180 | Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › | 0.61 | 50.0 | 3.42e-01 | 96.3% | 48.8% |
| 2cqhA00 | 3.30.70.330 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain | 0.60 | 48.0 | 4.11e-01 | 92.6% | 58.1% |
| 2c60A01 | 3.10.20.90 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1 | 0.57 | 34.0 | 3.06e-01 | 79.6% | 40.5% |
| 2lt3A01 | 1.20.58.1290 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › CarD-like, C-terminal domain | 0.56 | 48.0 | 4.01e-01 | 100.0% | 55.0% |
| 4d05A01 | 3.30.1490.70 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › | 0.56 | 37.0 | 3.38e-01 | 70.4% | 61.8% |
| 2ctdA00 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.55 | 30.0 | 2.46e-01 | 85.2% | 26.0% |
| 5lqdD01 | 3.40.50.2000 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycogen Phosphorylase B; | 0.55 | 43.0 | 2.93e-01 | 90.7% | 55.0% |
| 2drpA01 | 3.30.160.60 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Classic Zinc Finger | 0.52 | 28.0 | 3.27e-01 | 77.8% | 73.5% |
| 3oymA01 | 1.10.340.70 | Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › | 0.52 | 39.0 | 3.40e-01 | 85.2% | 61.3% |
| 2b4vA03 | 3.30.70.1970 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.52 | 43.0 | 3.67e-01 | 100.0% | 79.8% |
| 2x49A04 | 3.40.50.12790 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › FHIPEP family, domain 4 | 0.52 | 42.0 | 3.61e-01 | 98.1% | 64.6% |
| 1hqmD05 | 3.90.105.10 | Alpha Beta › Alpha-Beta Complex › Molybdopterin biosynthesis moea protein, domain 2 › Molybdopterin biosynthesis moea protein, domain 2 | 0.51 | 34.0 | 3.13e-01 | 87.0% | 49.3% |
| 3ei3A04 | 1.10.150.910 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › | 0.51 | 41.0 | 3.66e-01 | 98.1% | 87.1% |
| 2x48A00 | 1.10.10.60 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like | 0.50 | 40.0 | 4.01e-01 | 94.4% | 88.9% |
| 4bpe700 | 1.10.10.10 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain | 0.50 | 39.0 | 3.33e-01 | 92.6% | 57.4% |
ECOD (17)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1007250 | 842.1.1.1 ↗ | a+b two layers › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thymidylate synthase-complementing protein Thy1 › Thy1 | 0.92 | 85.0 | 5.55e-01 | 100.0% | 58.2% |
| 4221333 | 109.4.1.1283 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › HEAT, HEAT_PBS, HEAT_2 | 0.68 | 54.0 | 3.72e-01 | 90.7% | 32.3% |
| 3759449 | 109.4.1.894 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › ARM_CUL7_CUL9 | 0.61 | 51.0 | 3.60e-01 | 96.3% | 56.2% |
| 3730127 | 604.5.1.0 ↗ | alpha bundles › Spectrin repeat-like › PhoU-like (Pfam 01895) › PhoU-like (Pfam 01895) | 0.61 | 51.0 | 3.25e-01 | 100.0% | 45.0% |
| 3595258 | 304.9.1.0 ↗ | a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD | 0.58 | 47.0 | 4.02e-01 | 94.4% | 93.7% |
| 3607481 | 810.1.1.0 ↗ | a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) | 0.57 | 48.0 | 3.46e-01 | 100.0% | 88.0% |
| 3704488 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.57 | 46.0 | 3.62e-01 | 92.6% | 80.8% |
| 3815009 | 109.4.1.1308 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR, PPR_1, PPR_2, PPR_3, TPR_24 | 0.55 | 46.0 | 2.65e-01 | 100.0% | 48.9% |
| 3685060 | 2484.1.1.41 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › AnmK | 0.55 | 44.0 | 2.75e-01 | 98.1% | 38.5% |
| 2792935 | 2007.1.1.11 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Class I glutamine amidotransferase-like › Peptidase_C26 | 0.55 | 44.0 | 3.00e-01 | 100.0% | 47.1% |
| 4243626 | 2004.1.1.87 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SMC_N | 0.55 | 46.0 | 2.82e-01 | 98.1% | 63.5% |
| 4392997 | 3255.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in flagellar biosynthesis protein flhA › a/b domain in flagellar biosynthesis protein flhA › a/b domain in flagellar biosynthesis protein flhA › FHIPEP | 0.54 | 46.0 | 3.76e-01 | 98.1% | 62.9% |
| 4012817 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 44.0 | 3.33e-01 | 98.1% | 75.2% |
| 2832047 | 3255.1.1.1 ↗ | a/b three-layered sandwiches › a/b domain in flagellar biosynthesis protein flhA › a/b domain in flagellar biosynthesis protein flhA › a/b domain in flagellar biosynthesis protein flhA › FHIPEP | 0.52 | 42.0 | 3.42e-01 | 92.6% | 60.0% |
| 4024787 | 2002.1.1.189 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PRMT5_TIM | 0.52 | 43.0 | 2.73e-01 | 98.1% | 33.3% |
| 4290876 | 2004.1.1.198 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 | 0.51 | 43.0 | 2.64e-01 | 100.0% | 63.7% |
| 3408969 | 377.9.1.8 ↗ | few secondary structure elements › Glucocorticoid receptor-like › HIT/MYND zinc finger-like › HIT/MYND zinc finger-like › zf-FCS | 0.50 | 34.0 | 3.22e-01 | 72.2% | 67.1% |
D2
high
residues 24-96
Domain cluster:
representative
ECOD (4)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3602825 | 633.12.1.0 ↗ | alpha bundles › Bromodomain-like › Ta0600-like › Ta0600-like | 0.60 | 50.0 | 4.24e-01 | 95.9% | 93.8% |
| 2981329 | 149.1.1.0 ↗ | alpha arrays › Cytochrome P450 › Cytochrome P450 › Cytochrome P450 | 0.58 | 48.0 | 3.13e-01 | 94.5% | 60.3% |
| 3206519 | 632.22.1.62 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats › ATG17_like | 0.57 | 50.0 | 3.71e-01 | 98.6% | 74.4% |
| 4028707 | 4163.1.2.0 ↗ | alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like | 0.54 | 43.0 | 3.65e-01 | 84.9% | 57.5% |