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OQ221551.1__WCI99924.1__PhiCrAssBcn16_75__00067

Bact-Vir

OQ221551.1__WCI99924.1__PhiCrAssBcn16_75__00067

Identity

Accession:
OQ221551 ↗
Kingdom:
phage

Quality

89.7 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 8-62
PDB
Domain cluster: representative
CATH (50)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
8e9gE01 1.10.10.1590 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › NADH-quinone oxidoreductase subunit E 0.83 57.0 5.40e-01 72.7% 61.9%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.79 65.0 6.35e-01 100.0% 83.6%
4fe7A03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.78 65.0 5.18e-01 100.0% 46.8%
3zx4A02 3.30.980.20 Alpha Beta › 2-Layer Sandwich › Threonyl-tRNA Synthetase; Chain A, domain 2 › Putative mannosyl-3-phosphoglycerate phosphatase; domain 2 0.78 43.0 3.63e-01 76.4% 34.5%
3w6vA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 64.0 5.09e-01 100.0% 45.9%
3dteA02 1.10.10.1030 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › IrrE, HTH domain 0.77 54.0 6.03e-01 90.9% 100.0%
3mklA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 63.0 5.10e-01 98.2% 48.1%
3oioA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.77 63.0 5.05e-01 100.0% 45.5%
2is6A04 1.10.486.10 Mainly Alpha › Orthogonal Bundle › PCRA; domain 4 › PCRA; domain 4 0.77 50.0 3.50e-01 70.9% 23.0%
2o38A01 1.10.260.40 Mainly Alpha › Orthogonal Bundle › 434 Repressor (Amino-terminal Domain) › lambda repressor-like DNA-binding domains 0.77 46.0 4.35e-01 76.4% 50.8%
1zq3P00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.76 52.0 4.83e-01 80.0% 57.4%
2k9sA00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 63.0 5.14e-01 100.0% 50.5%
3oouA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.74 62.0 6.28e-01 100.0% 96.4%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.73 61.0 6.16e-01 100.0% 96.4%
1bl0A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.72 60.0 5.99e-01 100.0% 94.6%
4fcyA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 50.0 4.56e-01 80.0% 53.8%
3mn2A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 57.0 4.76e-01 100.0% 49.1%
6xiuA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 58.0 4.83e-01 100.0% 52.5%
4dsfA04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.67 50.0 3.90e-01 98.2% 39.1%
2kt0A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 48.0 5.05e-01 83.6% 91.5%
7u37A01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 5.32e-01 92.7% 100.0%
2dn0A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 49.0 4.45e-01 81.8% 57.9%
5d0yA00 1.10.1760.20 Mainly Alpha › Orthogonal Bundle › Arp2/3 complex 21 kDa subunit ARPC3 › 0.66 57.0 4.17e-01 98.2% 78.7%
4d7rA01 1.10.220.20 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › 0.65 52.0 4.65e-01 96.4% 62.2%
2da7A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 48.0 4.49e-01 96.4% 63.4%
2da3A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.63 46.0 4.83e-01 96.4% 93.6%
4ch7A01 1.10.10.2890 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.62 55.0 4.31e-01 100.0% 93.1%
1z1nX02 3.90.10.10 Alpha Beta › Alpha-Beta Complex › Cytochrome C3 › Cytochrome C3 0.62 45.0 3.60e-01 80.0% 61.5%
3nrkA01 1.10.4030.10 Mainly Alpha › Orthogonal Bundle › Triger factor/SurA peptide-binding fold › Porin chaperone SurA, peptide-binding domain 0.61 44.0 3.07e-01 80.0% 25.2%
2bpoA04 3.40.50.80 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nucleotide-binding domain of ferredoxin-NADP reductase (FNR) module 0.60 53.0 3.83e-01 100.0% 37.0%
1di1A00 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.60 49.0 3.10e-01 90.9% 43.8%
2isnB00 3.60.40.10 Alpha Beta › 4-Layer Sandwich › Phosphatase 2c; domain 1 › PPM-type phosphatase domain 0.59 50.0 3.09e-01 96.4% 58.7%
3py8A04 1.10.150.20 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › 5' to 3' exonuclease, C-terminal subdomain 0.59 54.0 3.87e-01 100.0% 56.2%
2x1dA02 1.10.10.2120 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.58 41.0 3.76e-01 72.7% 86.5%
4e4yA00 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.58 49.0 3.22e-01 96.4% 43.4%
4ye6A02 1.10.10.2420 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › 0.57 45.0 4.44e-01 90.9% 91.4%
5z4zC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 48.0 4.21e-01 100.0% 68.2%
3r2cA00 1.10.940.10 Mainly Alpha › Orthogonal Bundle › N-utilizing Substance Protein B Homolog; Chain A › NusB-like 0.57 47.0 3.66e-01 100.0% 39.9%
1iv8A03 1.10.150.200 Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Maltooligosyl trehalose synthase; domain 3 0.56 46.0 4.11e-01 100.0% 63.5%
4fjqA01 1.10.600.10 Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase 0.56 48.0 2.93e-01 96.4% 36.0%
3tw6A06 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.56 33.0 3.36e-01 70.9% 57.4%
4gxbA02 1.20.80.60 Mainly Alpha › Up-down Bundle › Acyl-CoA Binding Protein › 0.55 32.0 3.14e-01 80.0% 48.4%
1n00A03 1.10.220.10 Mainly Alpha › Orthogonal Bundle › Annexin V; domain 1 › Annexin 0.55 46.0 4.25e-01 94.5% 72.6%
1x9bA00 1.20.58.290 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hypothetical membrane protein ta0354_69_121. 0.55 41.0 4.21e-01 96.4% 86.8%
3kglB01 2.60.120.10 Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls 0.55 42.0 2.73e-01 80.0% 23.3%
2z0fA03 3.40.120.10 Alpha Beta › 3-Layer(aba) Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 3 › Alpha-D-Glucose-1,6-Bisphosphate, subunit A, domain 3 0.53 45.0 3.54e-01 98.2% 86.9%
5h8yD02 3.30.413.10 Alpha Beta › 2-Layer Sandwich › Sulfite Reductase Hemoprotein; domain 1 › Sulfite Reductase Hemoprotein, domain 1 0.52 40.0 2.80e-01 87.3% 68.0%
1k32A03 3.30.750.44 Alpha Beta › 2-Layer Sandwich › Transcription Regulator spoIIAA › 0.52 36.0 3.42e-01 80.0% 58.3%
1vhxB00 3.30.420.140 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain 0.52 34.0 2.71e-01 76.4% 27.5%
7y11B01 1.10.8.20 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › N-terminal domain of phosphatidylinositol transfer protein sec14p 0.51 34.0 3.35e-01 74.5% 61.9%
ECOD (74)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4944767 101.1.2.883 alpha arrays › HTH › HTH › winged helix domain › Radical_SAM 0.81 62.0 5.52e-01 90.9% 60.0%
4121950 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.80 67.0 6.77e-01 98.2% 94.5%
3971083 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.80 68.0 6.86e-01 100.0% 96.4%
3975658 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.79 65.0 5.59e-01 100.0% 56.7%
3981026 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.79 65.0 5.29e-01 100.0% 48.6%
3969207 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.79 66.0 6.00e-01 100.0% 69.3%
4009674 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.79 67.0 5.29e-01 100.0% 47.3%
3967873 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.79 67.0 6.70e-01 98.2% 94.5%
4211867 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.79 67.0 5.34e-01 100.0% 48.2%
4034594 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 67.0 6.71e-01 100.0% 96.4%
3945925 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.78 66.0 5.47e-01 100.0% 53.0%
3987774 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 66.0 6.62e-01 100.0% 96.4%
3982082 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 65.0 6.52e-01 96.4% 92.7%
3970819 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 66.0 6.47e-01 100.0% 88.3%
3948096 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.78 66.0 6.64e-01 100.0% 96.4%
3282956 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.78 64.0 6.44e-01 98.2% 92.7%
4216701 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 62.0 6.50e-01 92.7% 98.0%
3978422 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.77 66.0 6.60e-01 100.0% 96.4%
None 0.77 66.0 5.45e-01 100.0% 53.0%
3972621 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 63.0 6.40e-01 96.4% 92.7%
4193366 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.77 66.0 5.27e-01 100.0% 48.2%
3945505 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.77 63.0 4.95e-01 100.0% 42.9%
3588540 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.77 65.0 6.52e-01 98.2% 94.5%
3942713 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.77 63.0 6.54e-01 94.5% 100.0%
3949338 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.77 62.0 6.47e-01 94.5% 100.0%
3944321 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 64.0 6.25e-01 98.2% 86.7%
3590374 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.76 65.0 6.57e-01 100.0% 96.4%
3277793 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 63.0 6.37e-01 100.0% 94.5%
3968298 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.76 64.0 6.44e-01 98.2% 94.5%
3968254 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.76 65.0 5.41e-01 100.0% 55.8%
4379469 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 64.0 6.25e-01 98.2% 86.7%
3964894 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.76 64.0 5.31e-01 100.0% 53.0%
3587439 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.76 63.0 6.31e-01 96.4% 92.7%
3728726 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.76 66.0 6.04e-01 100.0% 74.7%
3280571 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.76 65.0 6.39e-01 100.0% 90.0%
3979084 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.76 61.0 6.35e-01 94.5% 100.0%
4540842 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.75 63.0 4.51e-01 100.0% 31.2%
4983508 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 57.0 5.26e-01 96.4% 64.3%
3727621 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 66.0 5.83e-01 100.0% 68.8%
3288983 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.75 65.0 6.36e-01 100.0% 90.0%
4094272 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.75 62.0 6.21e-01 96.4% 92.7%
3203415 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.75 65.0 5.65e-01 100.0% 76.5%
4348165 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.75 61.0 5.80e-01 96.4% 78.5%
3517520 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.74 61.0 5.98e-01 96.4% 85.0%
3591036 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 62.0 6.28e-01 100.0% 96.4%
3976759 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.74 64.0 5.28e-01 100.0% 54.0%
2670618 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 62.0 6.15e-01 96.4% 91.2%
3283917 101.1.1.5 alpha arrays › HTH › HTH › Three-helical HTH › TetR_N 0.74 59.0 6.11e-01 92.7% 98.0%
1212042 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 62.0 6.28e-01 100.0% 96.4%
3960513 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 61.0 6.10e-01 98.2% 94.5%
3979665 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 59.0 6.13e-01 94.5% 100.0%
1761205 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 60.0 6.12e-01 96.4% 96.3%
3947727 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 59.0 6.13e-01 94.5% 100.0%
3941568 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 60.0 6.08e-01 96.4% 94.5%
3284075 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.72 60.0 6.08e-01 100.0% 96.4%
3984271 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 59.0 4.83e-01 96.4% 48.6%
3632593 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.72 50.0 4.92e-01 80.0% 68.3%
3945993 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 61.0 6.15e-01 100.0% 94.5%
4969429 378.1.1.2 few secondary structure elements › His-Me finger endonucleases › His-Me finger endonucleases › His-Me finger endonucleases › HNH 0.71 61.0 4.30e-01 92.7% 66.9%
3278092 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 62.0 5.93e-01 100.0% 84.6%
3289379 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 57.0 5.78e-01 98.2% 94.5%
3970742 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 57.0 5.76e-01 100.0% 96.4%
3278142 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.70 58.0 5.74e-01 96.4% 89.8%
5074725 101.1.4.0 alpha arrays › HTH › HTH › tetra-helical, lambda repressor-like 0.70 46.0 4.40e-01 74.5% 58.5%
3507783 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 52.0 5.15e-01 87.3% 76.7%
3943601 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 56.0 5.60e-01 98.2% 94.5%
5052031 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 46.0 5.08e-01 70.9% 100.0%
5014303 604.39.1.5 alpha bundles › Spectrin repeat-like › S-component of energy-coupling factor (ECF) transporters › S-component of energy-coupling factor (ECF) transporters › ECF_trnsprt 0.68 57.0 3.96e-01 98.2% 71.3%
3948690 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.65 56.0 5.54e-01 100.0% 98.3%
4039740 3317.1.1.2 alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain › HTH_ParB 0.59 39.0 3.79e-01 74.5% 58.5%
3593568 207.1.1.0 beta duplicates or obligate multimers › Single-stranded right-handed beta-helix › Leucine-rich repeats › Leucine-rich repeats 0.59 46.0 3.15e-01 89.1% 31.6%
4651138 4957.1.1.0 a+b complex topology › helical domain in yeast RNA-polymerases › third helical domain in yeast RNA-polymerase II beta-prime subunit › third helical domain in yeast RNA-polymerase II beta-prime subunit 0.54 36.0 3.54e-01 74.5% 63.3%
3256610 103.1.1.0 alpha arrays › RuvA-C › RuvA-C, UBA, CRAL/TRIO-N, HBS1 › UBA-like domain 0.53 35.0 3.52e-01 74.5% 67.3%
4946474 3317.1.1.0 alpha arrays › KorB C-terminal domain-like › KorB C-terminal domain › KorB C-terminal domain 0.51 33.0 3.20e-01 74.5% 55.4%
D2 high residues 66-116
PDB
Domain cluster: representative
CATH (22)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4fe7A03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 58.0 4.68e-01 98.0% 49.5%
3oouA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.71 59.0 5.80e-01 98.0% 94.5%
1a04A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.70 59.0 5.18e-01 100.0% 62.5%
3mn2A00 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 55.0 4.45e-01 92.2% 50.0%
3lsgA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.69 56.0 5.54e-01 96.1% 94.5%
1p4wA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 57.0 4.91e-01 100.0% 57.5%
3ulqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.69 56.0 5.47e-01 100.0% 86.2%
1u8bA02 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.68 56.0 5.37e-01 100.0% 85.2%
6v7xB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.67 55.0 5.45e-01 100.0% 89.3%
4mloA03 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.67 54.0 5.20e-01 98.0% 82.0%
1l3lA02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.66 57.0 5.35e-01 100.0% 92.1%
6xiuA01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.66 56.0 4.56e-01 100.0% 54.5%
3jsjC00 1.10.357.10 Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 0.65 54.0 3.78e-01 100.0% 28.4%
2i10A01 1.10.10.60 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Homeodomain-like 0.65 53.0 5.17e-01 100.0% 88.3%
6uglB02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.64 50.0 4.92e-01 96.1% 82.8%
3ppuB02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.53 41.0 3.31e-01 90.2% 50.4%
4l3tA03 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.53 45.0 2.98e-01 100.0% 57.5%
1br2A03 1.20.120.720 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Myosin VI head, motor domain, U50 subdomain 0.52 38.0 3.24e-01 82.4% 61.1%
1rykA00 1.10.1470.10 Mainly Alpha › Orthogonal Bundle › Protein Yjbj; Chain: A; › YjbJ 0.52 40.0 3.71e-01 90.2% 73.9%
3lcnB00 1.10.340.40 Mainly Alpha › Orthogonal Bundle › Endonuclease III; domain 1 › Nuclear abundant poly(A) RNA-bind protein 2, N-terminal domain 0.51 41.0 3.45e-01 98.0% 49.5%
2ltuA00 1.10.8.10 Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Ubiquitin-associated (UBA) domain 0.51 35.0 3.35e-01 74.5% 62.9%
4aidA02 1.10.10.400 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Polyribonucleotide nucleotidyltransferase, RNA-binding domain 0.51 38.0 3.48e-01 92.2% 87.8%
ECOD (60)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3942713 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.74 59.0 6.00e-01 92.2% 100.0%
4938093 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.74 64.0 5.80e-01 100.0% 80.0%
2670618 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.73 58.0 5.66e-01 92.2% 96.5%
3286669 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 57.0 5.62e-01 90.2% 96.4%
3588540 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.72 59.0 5.86e-01 96.1% 92.7%
3289320 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 57.0 5.63e-01 90.2% 96.4%
3789307 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.72 61.0 5.59e-01 100.0% 91.4%
3979732 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.72 56.0 5.30e-01 90.2% 75.4%
3589976 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.72 60.0 5.91e-01 96.1% 92.7%
3976262 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.72 60.0 4.75e-01 98.0% 47.0%
3590374 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.71 60.0 5.88e-01 98.0% 94.5%
4241379 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.71 57.0 5.63e-01 92.2% 90.9%
4368209 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.71 56.0 5.65e-01 92.2% 100.0%
3945993 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 58.0 5.77e-01 96.1% 98.2%
3976958 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.71 57.0 5.79e-01 92.2% 100.0%
4544741 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.71 58.0 5.62e-01 98.0% 90.0%
3971324 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.71 59.0 5.67e-01 98.0% 95.0%
3591036 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.71 59.0 5.79e-01 98.0% 94.5%
4418437 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.70 58.0 5.43e-01 96.1% 78.5%
3969408 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 55.0 5.41e-01 90.2% 96.4%
4277585 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 57.0 5.67e-01 96.1% 92.7%
3277965 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 54.0 5.48e-01 90.2% 98.0%
3946092 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.70 56.0 5.48e-01 90.2% 89.1%
4159676 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 55.0 5.42e-01 90.2% 98.2%
1761205 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.70 55.0 5.45e-01 92.2% 94.4%
3250031 101.1.1.297 alpha arrays › HTH › HTH › Three-helical HTH › HTH_NPRL3 0.70 52.0 4.89e-01 88.2% 64.6%
4010518 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.69 53.0 5.30e-01 90.2% 96.4%
3970819 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 58.0 5.61e-01 100.0% 91.7%
1761264 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 54.0 5.37e-01 90.2% 100.0%
5053728 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 56.0 5.52e-01 96.1% 94.5%
4304527 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 57.0 5.47e-01 98.0% 93.3%
3289379 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.69 56.0 5.53e-01 96.1% 98.2%
4363165 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 56.0 5.32e-01 100.0% 90.8%
3968456 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.68 55.0 4.52e-01 98.0% 52.8%
4539758 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.68 56.0 4.43e-01 100.0% 49.2%
4211867 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.68 55.0 4.48e-01 98.0% 49.1%
3288983 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 56.0 5.38e-01 98.0% 96.7%
3965747 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.68 52.0 5.15e-01 90.2% 100.0%
3277793 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.68 55.0 5.46e-01 96.1% 98.2%
3969567 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.67 57.0 5.47e-01 100.0% 86.7%
3979084 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 50.0 5.09e-01 86.3% 100.0%
3987774 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.67 55.0 5.48e-01 98.0% 100.0%
3981026 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.67 54.0 4.47e-01 98.0% 54.3%
3280630 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.67 52.0 5.08e-01 92.2% 83.3%
4251046 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.67 56.0 5.38e-01 100.0% 91.7%
4267606 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.66 51.0 5.19e-01 90.2% 96.0%
3288934 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.66 52.0 5.05e-01 98.0% 81.7%
3968277 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.65 52.0 5.19e-01 98.0% 94.5%
3284075 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.65 52.0 5.12e-01 96.1% 92.7%
4007664 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.65 53.0 4.93e-01 100.0% 75.7%
4576414 101.1.1.2 alpha arrays › HTH › HTH › Three-helical HTH › HTH_AraC 0.65 52.0 4.93e-01 96.1% 83.1%
3944639 101.1.1.58 alpha arrays › HTH › HTH › Three-helical HTH › HTH_18 0.64 52.0 4.36e-01 100.0% 52.9%
3970742 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.64 52.0 5.15e-01 98.0% 100.0%
3945040 101.1.1.0 alpha arrays › HTH › HTH › Three-helical HTH 0.59 47.0 4.68e-01 98.0% 100.0%
4961280 101.1.2.939 alpha arrays › HTH › HTH › winged helix domain › PF26270 0.59 47.0 4.53e-01 100.0% 83.1%
3984815 101.1.1.13 alpha arrays › HTH › HTH › Three-helical HTH › HTH_Tnp_1 0.59 45.0 4.50e-01 98.0% 87.3%
137157 2006.1.1.18 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › HAD_2 0.57 42.0 2.80e-01 80.4% 78.7%
4350523 101.11.1.1 alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.56 46.0 3.86e-01 100.0% 70.0%
4595954 101.11.1.0 alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 0.54 45.0 3.91e-01 100.0% 76.5%
4436943 101.11.1.1 alpha arrays › HTH › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › Polynucleotide phosphorylase/guanosine pentaphosphate synthase (PNPase/GPSI), domain 3 › PNPase 0.51 41.0 3.67e-01 98.0% 81.2%
D3 medium residues 125-212
PDB
CATH (77)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3c0wA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.80 74.0 6.60e-01 98.9% 73.3%
3c19A01 3.30.70.1380 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Transcriptional regulatory protein pf0864 domain like 0.71 51.0 4.91e-01 76.1% 66.7%
2ab5B01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.70 63.0 5.58e-01 100.0% 80.5%
2nrqA00 3.30.1440.10 Alpha Beta › 2-Layer Sandwich › 50s Ribosomal Protein L5; Chain: A, › Ribosomal protein L5 0.69 49.0 4.20e-01 73.9% 94.2%
1vi7A01 3.30.230.30 Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S5; domain 2 › Impact, N-terminal domain 0.67 48.0 4.15e-01 75.0% 70.4%
4wsqB00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.67 53.0 3.64e-01 86.4% 26.8%
6fucA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.65 46.0 4.66e-01 75.0% 74.4%
2lqjA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.64 44.0 4.36e-01 72.7% 67.0%
4q5eA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 46.0 4.93e-01 78.4% 89.3%
4feuF01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 44.0 4.82e-01 75.0% 87.7%
1y0hB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.63 45.0 4.35e-01 73.9% 90.8%
1vm0A00 3.30.110.20 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › Alba-like domain 0.63 51.0 5.04e-01 89.8% 82.8%
1nxiA00 3.30.70.970 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RraB-like 0.62 50.0 4.33e-01 85.2% 70.5%
1ej6A02 3.55.60.10 Alpha Beta › 3-Layer(bab) Sandwich › Reovirus components fold › Reovirus components 0.62 52.0 4.42e-01 93.2% 67.6%
3wpwA00 3.30.1330.60 Alpha Beta › 2-Layer Sandwich › 60s Ribosomal Protein L30; Chain: A; › OmpA-like domain 0.62 49.0 4.18e-01 86.4% 94.0%
1ztpA01 3.30.760.10 Alpha Beta › 2-Layer Sandwich › RNA Cap, Translation Initiation Factor Eif4e › RNA Cap, Translation Initiation Factor Eif4e 0.62 44.0 3.38e-01 76.1% 60.8%
4h05B01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.61 44.0 4.43e-01 76.1% 75.8%
3eeeA00 3.90.1520.10 Alpha Beta › Alpha-Beta Complex › H-NOX domain › H-NOX domain 0.61 53.0 4.21e-01 98.9% 57.4%
3fezA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 42.0 3.43e-01 71.6% 45.6%
1sqeA00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.61 42.0 4.05e-01 71.6% 67.3%
4djbA00 3.30.70.2870 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Mastadenovirus E4 ORF3 0.61 43.0 3.94e-01 73.9% 66.9%
2rsvA00 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.61 48.0 3.17e-01 87.5% 76.2%
2onlC01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 43.0 4.40e-01 77.3% 76.7%
1yirA00 3.20.140.10 Alpha Beta › Alpha-Beta Barrel › nicotinate phosphoribosyltransferase › nicotinate phosphoribosyltransferase 0.60 46.0 2.99e-01 80.7% 92.8%
2x7gA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 44.0 4.46e-01 80.7% 78.4%
3tvzB00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.60 44.0 3.79e-01 76.1% 75.2%
1jw3A00 3.55.10.10 Alpha Beta › 3-Layer(bab) Sandwich › Archease, Possible Chaperone; Chain: A; domain 1 › Archease domain 0.60 44.0 3.78e-01 76.1% 100.0%
3go9A02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.60 43.0 3.31e-01 77.3% 72.8%
3zxoA00 3.30.565.10 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain 0.60 48.0 4.38e-01 90.9% 72.0%
2qrrA00 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.59 40.0 3.94e-01 70.5% 69.1%
1lq9A00 3.30.70.100 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.58 40.0 3.75e-01 71.6% 69.6%
3pu2B00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 45.0 3.76e-01 83.0% 88.9%
4ofkB00 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.58 45.0 4.31e-01 84.1% 90.4%
3lpxB02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.58 44.0 4.39e-01 87.5% 77.7%
7xhzA01 3.30.1240.10 Alpha Beta › 2-Layer Sandwich › Hypothetical Protein, Haloacid Dehalogenase-like Hydrolase; Chain: A; domain 2 › 0.58 46.0 4.13e-01 86.4% 97.6%
2rkuA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.58 46.0 4.62e-01 87.5% 85.4%
2ldkA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.58 44.0 3.61e-01 83.0% 100.0%
2g47A02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.58 43.0 3.23e-01 79.5% 94.8%
2zkzC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 46.0 4.64e-01 100.0% 88.5%
2ol5A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.57 45.0 3.63e-01 87.5% 72.7%
3zieD00 3.30.110.150 Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › SepF-like protein 0.57 38.0 3.95e-01 79.5% 73.2%
3jr1A01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 41.0 4.01e-01 81.8% 69.7%
6nhsA00 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.56 40.0 2.94e-01 73.9% 90.8%
5wt3A03 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.56 39.0 3.14e-01 71.6% 37.6%
3q63F00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.56 39.0 3.40e-01 72.7% 84.2%
3ub0A02 3.30.70.3540 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Nsp8 replicase, head domain 0.56 45.0 4.51e-01 89.8% 100.0%
1zysA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 44.0 4.34e-01 87.5% 84.2%
5gt8D02 3.30.2130.10 Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like 0.55 41.0 3.68e-01 78.4% 99.2%
2e7vA01 3.30.70.960 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › SEA domain 0.55 38.0 3.65e-01 72.7% 80.0%
3encA00 3.30.310.50 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Alpha-D-phosphohexomutase, C-terminal domain 0.55 37.0 3.92e-01 73.9% 79.7%
1xkpB00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.55 45.0 4.02e-01 88.6% 79.3%
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.54 45.0 3.63e-01 92.0% 48.0%
1svvB02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 40.0 3.95e-01 89.8% 75.0%
4wnoA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 41.0 4.17e-01 81.8% 85.1%
1ft9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 43.0 4.57e-01 94.3% 97.5%
1js3A03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.54 41.0 4.07e-01 87.5% 76.3%
4o4bB00 3.30.470.160 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › Inositol polyphosphate kinase 0.54 42.0 3.15e-01 87.5% 75.2%
1s28A00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.54 44.0 3.88e-01 88.6% 78.5%
2rioA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.54 38.0 3.95e-01 75.0% 80.5%
2bhoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.53 44.0 4.06e-01 88.6% 75.5%
5e6zC01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.53 41.0 3.92e-01 83.0% 92.5%
6liuC02 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.53 42.0 3.89e-01 87.5% 69.8%
2m89A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.53 37.0 3.27e-01 72.7% 84.3%
1s12A00 3.30.70.1490 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Cysteine protease Prp 0.52 40.0 3.96e-01 83.0% 95.7%
4e1oA03 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.52 41.0 4.04e-01 88.6% 78.6%
1ln1A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.52 40.0 3.20e-01 86.4% 76.8%
1bo1A02 3.30.810.10 Alpha Beta › 2-Layer Sandwich › Phosphatidylinositol Phosphate Kinase Iibeta; Chain: A, domain 2 › 2-Layer Sandwich 0.52 40.0 3.23e-01 79.5% 79.9%
3d6kA01 3.90.1150.10 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › Aspartate Aminotransferase, domain 1 0.52 44.0 3.70e-01 97.7% 88.2%
2eqaA01 3.90.870.10 Alpha Beta › Alpha-Beta Complex › DHBP synthase › DHBP synthase 0.52 43.0 3.34e-01 94.3% 81.1%
5t89X01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 39.0 4.07e-01 83.0% 100.0%
4c98A01 3.30.70.1890 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.52 36.0 3.48e-01 73.9% 72.4%
3uoxB01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 38.0 2.72e-01 80.7% 38.3%
5x7fA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.52 37.0 2.95e-01 77.3% 51.0%
3vtiA03 3.90.870.40 Alpha Beta › Alpha-Beta Complex › DHBP synthase › 0.51 41.0 3.74e-01 89.8% 90.1%
4xeaA02 3.30.830.10 Alpha Beta › 2-Layer Sandwich › Cytochrome Bc1 Complex; Chain A, domain 1 › Metalloenzyme, LuxS/M16 peptidase-like 0.51 39.0 3.11e-01 83.0% 95.3%
1jyoA00 3.30.1460.10 Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › 0.50 40.0 3.58e-01 87.5% 73.8%
2leqA00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.50 34.0 3.02e-01 72.7% 83.6%
ECOD (84)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4516768 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.82 75.0 6.96e-01 98.9% 81.8%
3175120 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.80 73.0 6.76e-01 98.9% 87.3%
5047813 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.78 71.0 5.80e-01 100.0% 61.3%
4971398 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.78 71.0 6.56e-01 100.0% 96.4%
4975579 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.77 71.0 5.80e-01 100.0% 60.6%
4997602 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.77 70.0 6.59e-01 98.9% 93.3%
5072185 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.76 68.0 6.68e-01 100.0% 90.5%
5049353 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.76 69.0 6.09e-01 98.9% 73.6%
3603683 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.75 68.0 5.71e-01 100.0% 66.9%
4978472 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.74 67.0 6.52e-01 98.9% 100.0%
4142602 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.74 65.0 6.20e-01 97.7% 84.0%
4566109 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.74 63.0 6.17e-01 100.0% 86.3%
5022277 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.74 67.0 5.87e-01 100.0% 73.1%
3603739 101.1.1.498 alpha arrays › HTH › HTH › Three-helical HTH › LAGLIDADG_3 0.73 67.0 4.47e-01 100.0% 27.1%
3952678 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.73 61.0 6.06e-01 88.6% 91.1%
4153241 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.73 65.0 6.15e-01 98.9% 89.5%
4538250 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.73 66.0 5.71e-01 100.0% 70.4%
5030026 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.73 64.0 6.41e-01 95.5% 94.4%
5029251 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.73 64.0 6.51e-01 100.0% 100.0%
4142447 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.73 65.0 6.24e-01 98.9% 87.0%
4128067 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.72 66.0 6.09e-01 100.0% 80.0%
4413612 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.72 65.0 5.86e-01 100.0% 78.3%
4080330 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.72 65.0 6.23e-01 100.0% 88.0%
4941328 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.72 65.0 5.88e-01 100.0% 89.2%
3947754 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.71 51.0 5.52e-01 81.8% 88.0%
3604412 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.71 64.0 6.13e-01 100.0% 88.0%
4205746 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.71 63.0 6.01e-01 100.0% 86.7%
4127810 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.70 64.0 5.72e-01 100.0% 80.0%
4954535 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.70 61.0 5.96e-01 94.3% 91.6%
4929462 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.69 57.0 5.16e-01 87.5% 73.9%
5051925 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.69 62.0 5.73e-01 100.0% 78.2%
4354369 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.69 62.0 5.76e-01 100.0% 80.9%
4342313 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.68 59.0 5.68e-01 97.7% 84.0%
3971355 304.12.1.2 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C 0.67 46.0 4.72e-01 73.9% 74.1%
3815383 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.67 51.0 5.23e-01 83.0% 85.9%
4024901 328.3.1.0 a+b two layers › IF3-like › Translation initiation factor IF3, C-terminal domain › Translation initiation factor IF3, C-terminal domain 0.65 47.0 4.77e-01 79.5% 77.6%
4927528 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.65 53.0 4.77e-01 89.8% 73.2%
3726634 327.11.2.0 a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) 0.65 47.0 4.87e-01 80.7% 83.7%
5039525 304.4.1.4 a+b two layers › Alpha-beta plaits › Dimeric alpha+beta barrel › Dimeric alpha+beta barrel › ABM 0.65 46.0 4.59e-01 73.9% 73.3%
3973743 101.1.2.849 alpha arrays › HTH › HTH › winged helix domain › GDH_ACT2 0.65 49.0 4.85e-01 83.0% 78.9%
4951829 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.64 49.0 5.31e-01 84.1% 96.0%
3670277 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.64 49.0 5.31e-01 84.1% 96.0%
4927597 873.1.1.0 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain 0.64 52.0 4.69e-01 89.8% 69.6%
4129483 304.36.1.1 a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 0.64 48.0 4.75e-01 80.7% 85.3%
3281355 304.12.1.12 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › GDH_ACT2 0.64 49.0 4.70e-01 84.1% 81.9%
4180623 3012.1.1.1 a+b two layers › Cof C2 cap domain › Cof C2 cap domain › Cof C2 cap domain › Trehalose_PPase 0.64 49.0 5.14e-01 84.1% 90.0%
3807514 2006.1.1.3 a/b three-layered sandwiches › HAD domain-like › HAD domain-related › HAD-like › Trehalose_PPase 0.63 49.0 3.44e-01 84.1% 26.5%
3958221 304.55.1.0 a+b two layers › Alpha-beta plaits › Origin of replication-binding domains › Origin of replication-binding domains 0.63 49.0 4.10e-01 84.1% 50.3%
3450309 304.8.1.0 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like 0.63 49.0 4.82e-01 84.1% 86.3%
4955747 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.63 55.0 5.17e-01 100.0% 85.5%
3284477 304.12.1.2 a+b two layers › Alpha-beta plaits › Ribosomal protein S6 › Ribosomal protein S6 › MgtC_SapB_C 0.62 43.0 4.42e-01 72.7% 75.3%
7178 873.1.1.5 a+b complex topology › H-NOX domain › H-NOX domain › H-NOX domain › HNOB 0.62 53.0 4.22e-01 97.7% 53.2%
5041224 306.2.1.0 a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor 0.62 53.0 5.44e-01 98.9% 100.0%
3839261 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.61 50.0 4.62e-01 92.0% 82.4%
3290652 306.2.1.0 a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor 0.61 52.0 5.16e-01 97.7% 92.2%
3415186 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.61 44.0 2.97e-01 75.0% 46.9%
3513991 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.61 47.0 3.18e-01 84.1% 34.8%
3579884 206.1.1.190 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, IPK 0.61 49.0 2.95e-01 87.5% 21.4%
4377299 304.18.1.0 a+b two layers › Alpha-beta plaits › Anticodon-binding domain of PheRS › Anticodon-binding domain of PheRS 0.60 42.0 4.04e-01 73.9% 70.5%
3949622 312.1.1.4 a+b three layers › HIT-like › HIT-related › HIT-related › CDH 0.60 43.0 4.16e-01 75.0% 68.0%
3790068 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.60 48.0 3.09e-01 86.4% 77.5%
3354243 206.1.1.70 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, ABC1 0.60 46.0 3.26e-01 84.1% 46.9%
2831766 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.59 46.0 3.74e-01 84.1% 74.4%
3892479 206.1.1.71 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase, Kdo 0.59 47.0 3.18e-01 87.5% 36.1%
3960367 312.1.1.0 a+b three layers › HIT-like › HIT-related › HIT-related 0.59 43.0 4.13e-01 76.1% 70.0%
3777793 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.59 47.0 3.18e-01 87.5% 36.6%
3639208 331.10.1.1 a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › S-adenosylmethionine decarboxylase › SAM_decarbox 0.59 42.0 2.81e-01 75.0% 49.7%
5032609 3501.1.1.1 a+b two layers › protein PCC1 › protein PCC1 › protein PCC1 › Pcc1 0.59 41.0 4.38e-01 72.7% 86.7%
3823150 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.58 46.0 3.19e-01 86.4% 88.9%
3968428 304.36.1.1 a+b two layers › Alpha-beta plaits › YajQ-like › YajQ-like › DUF520 0.58 44.0 4.40e-01 83.0% 91.1%
3426109 304.9.1.0 a+b two layers › Alpha-beta plaits › RNA-binding domain, RBD › RNA-binding domain, RBD 0.58 41.0 3.87e-01 75.0% 69.1%
4485602 327.13.1.14 a+b two layers › Alpha-lytic protease prodomain-like › Ring-building motif I in type III secretion system › Ring-building motif I in type III secretion system › Yop-YscD_ppl_3rd 0.58 41.0 4.47e-01 76.1% 92.9%
5029901 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.58 46.0 3.54e-01 85.2% 41.8%
4064881 241.1.1.7 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone › Type_III_SycN 0.57 43.0 3.95e-01 84.1% 66.7%
4196383 304.8.1.5 a+b two layers › Alpha-beta plaits › ACT-like › ACT-like › NIL 0.56 40.0 3.93e-01 76.1% 71.0%
3265038 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.56 45.0 3.12e-01 87.5% 94.1%
3967172 309.1.1.11 a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › PqqF-like_C_4 0.56 42.0 3.41e-01 81.8% 44.9%
3630547 206.1.1.1 a+b complex topology › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase/SAICAR synthase/ATP-grasp › Protein kinase › Pkinase 0.56 44.0 3.05e-01 87.5% 25.2%
4977841 310.3.1.0 a+b two layers › RRF/tRNA synthetase additional domain-like › General secretion pathway protein M (EpsM) periplasmic domain-related › General secretion pathway protein M (EpsM) periplasmic domain-related 0.54 42.0 4.34e-01 84.1% 97.5%
3971872 241.1.1.0 a+b two layers › Type III secretory system chaperone-like › Type III secretory system chaperone › Type III secretory system chaperone 0.54 44.0 3.94e-01 88.6% 78.0%
4997336 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.53 42.0 4.19e-01 88.6% 84.2%
3738992 220.1.1.9 beta barrels › PH domain-like › PH domain-like › PH domain-like › Voldacs 0.52 47.0 3.82e-01 100.0% 88.5%
4420323 3016.1.1.0 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases 0.51 39.0 3.97e-01 86.4% 83.3%
3614712 868.1.1.0 a+b complex topology › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related › mRNA triphosphatase CET1-related 0.51 38.0 2.89e-01 80.7% 94.1%
D4 medium residues 213-312
PDB
CATH (24)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4yhxA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.78 68.0 5.98e-01 93.0% 74.5%
1af5A00 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.77 66.0 6.03e-01 91.0% 80.2%
8dy9I01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.74 69.0 5.32e-01 100.0% 51.9%
2dchX02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.74 67.0 6.52e-01 99.0% 92.8%
3hyiA01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.73 67.0 5.28e-01 98.0% 82.2%
1ef0B02 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.72 65.0 5.19e-01 98.0% 51.6%
1dfaA03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.72 57.0 5.89e-01 84.0% 100.0%
2dchX01 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.69 58.0 6.03e-01 91.0% 95.7%
6vudA02 3.30.1360.40 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.69 44.0 5.00e-01 72.0% 85.3%
2cw8A03 3.10.28.10 Alpha Beta › Roll › Endonuclease I-creI › Homing endonucleases 0.69 54.0 4.55e-01 84.0% 74.0%
3ipjA01 3.30.1360.60 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Glucose permease domain IIB 0.58 41.0 4.43e-01 82.0% 91.3%
1ft9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.57 42.0 4.59e-01 78.0% 100.0%
3ldgA01 3.30.2130.30 Alpha Beta › 2-Layer Sandwich › VC0802-like › 0.57 40.0 3.27e-01 74.0% 92.3%
2qwwC00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.56 40.0 3.65e-01 79.0% 54.3%
2i0zA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.55 43.0 3.25e-01 85.0% 61.9%
4b8xA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 3.78e-01 82.0% 70.7%
3oopA01 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.55 41.0 3.77e-01 81.0% 60.4%
2nn5A00 3.30.530.20 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › START domain 0.54 44.0 3.77e-01 90.0% 98.2%
3df8A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.53 41.0 4.03e-01 84.0% 77.1%
1j5wB01 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.52 43.0 3.45e-01 90.0% 89.1%
4feiA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.51 35.0 3.52e-01 70.0% 90.2%
4hw0C00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.51 37.0 3.88e-01 79.0% 84.9%
3m8eA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 38.0 3.86e-01 82.0% 88.1%
4ad9A02 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 33.0 3.57e-01 87.0% 81.0%
ECOD (86)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3603234 242.1.1.2 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_2 0.85 80.0 7.74e-01 99.0% 93.6%
4938256 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.82 60.0 6.84e-01 89.0% 100.0%
4998403 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.81 73.0 7.05e-01 98.0% 95.6%
4997778 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.81 75.0 6.52e-01 99.0% 80.7%
4933638 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.81 71.0 6.24e-01 93.0% 70.0%
4999899 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.80 71.0 6.57e-01 95.0% 96.0%
5023791 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.80 75.0 7.25e-01 100.0% 99.1%
4977674 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.80 75.0 5.62e-01 100.0% 56.4%
4993810 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.80 72.0 6.76e-01 97.0% 96.7%
5027606 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.79 70.0 6.47e-01 95.0% 97.6%
3950413 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.79 73.0 7.06e-01 98.0% 96.4%
4559752 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.79 67.0 7.06e-01 93.0% 98.9%
5022297 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.78 71.0 7.27e-01 98.0% 100.0%
5032338 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.78 73.0 6.78e-01 99.0% 97.5%
3604140 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.78 73.0 5.78e-01 99.0% 55.1%
5027649 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.78 71.0 6.66e-01 98.0% 94.2%
5027653 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.78 69.0 6.68e-01 98.0% 86.4%
4943246 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.77 71.0 7.11e-01 97.0% 99.0%
5058449 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.77 70.0 6.65e-01 98.0% 100.0%
5047814 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.77 68.0 7.03e-01 99.0% 98.9%
4943233 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.77 70.0 7.09e-01 98.0% 100.0%
4997606 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.77 71.0 6.00e-01 98.0% 65.2%
4939276 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.77 70.0 6.71e-01 99.0% 96.5%
4994374 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.77 71.0 6.63e-01 99.0% 97.5%
4978104 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.77 72.0 6.37e-01 100.0% 73.2%
4096150 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.77 72.0 6.62e-01 100.0% 85.6%
4288172 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.76 71.0 6.47e-01 100.0% 77.7%
5052155 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.76 70.0 5.72e-01 99.0% 57.1%
4937024 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.75 64.0 6.72e-01 97.0% 100.0%
4626502 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.75 70.0 6.43e-01 100.0% 86.4%
4122798 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.75 65.0 6.42e-01 93.0% 87.6%
4127810 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.75 70.0 6.53e-01 100.0% 93.3%
4222799 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.74 63.0 5.39e-01 91.0% 65.2%
4050037 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.74 69.0 6.91e-01 100.0% 100.0%
5023543 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.74 68.0 6.84e-01 98.0% 98.0%
4059572 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.74 66.0 6.38e-01 96.0% 91.8%
4669668 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.74 55.0 5.58e-01 86.0% 79.0%
5013026 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.74 55.0 4.60e-01 86.0% 46.5%
1159602 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.74 67.0 6.49e-01 99.0% 92.0%
5023789 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.73 52.0 5.63e-01 87.0% 87.1%
4651140 242.1.1.1 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_1 0.73 66.0 6.22e-01 99.0% 88.3%
4971000 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.73 66.0 6.65e-01 97.0% 98.0%
3952678 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.73 51.0 5.38e-01 72.0% 100.0%
5029357 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.73 67.0 6.36e-01 99.0% 93.0%
4978474 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.73 61.0 5.50e-01 98.0% 66.7%
3602142 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.73 67.0 6.57e-01 98.0% 98.1%
5052153 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.72 56.0 5.36e-01 86.0% 71.3%
4142447 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.72 65.0 6.58e-01 96.0% 96.0%
4277614 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.72 62.0 6.03e-01 93.0% 97.3%
4088598 242.1.1.6 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_WhiA 0.72 62.0 6.09e-01 94.0% 86.7%
4566109 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.72 56.0 5.73e-01 86.0% 86.3%
3603735 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.72 49.0 4.27e-01 71.0% 51.3%
3949652 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.72 65.0 6.26e-01 97.0% 94.5%
4160031 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.71 63.0 5.99e-01 96.0% 97.4%
5031916 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.71 65.0 6.00e-01 99.0% 95.2%
4128067 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.71 63.0 6.08e-01 96.0% 97.3%
4205746 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.70 63.0 6.26e-01 97.0% 95.2%
4997777 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.70 54.0 5.74e-01 86.0% 95.3%
4080330 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.70 63.0 6.37e-01 97.0% 99.0%
5022277 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.70 56.0 5.13e-01 86.0% 72.3%
4950410 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.69 50.0 5.49e-01 86.0% 93.8%
3602169 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.69 55.0 5.85e-01 86.0% 98.8%
4587247 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.69 55.0 5.78e-01 88.0% 94.4%
5065934 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.69 53.0 5.74e-01 87.0% 96.5%
4997602 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.68 55.0 5.45e-01 86.0% 93.3%
3955112 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.67 53.0 5.54e-01 87.0% 93.3%
3602727 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.67 51.0 5.31e-01 80.0% 93.3%
4999898 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.67 56.0 5.83e-01 89.0% 98.9%
4971398 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.67 51.0 4.97e-01 81.0% 84.5%
4342313 242.1.1.5 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › WhiA_N 0.67 58.0 5.89e-01 96.0% 94.0%
5032406 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 57.0 5.81e-01 92.0% 98.9%
4609849 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.66 52.0 5.43e-01 88.0% 92.2%
5072185 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.65 52.0 5.34e-01 85.0% 95.8%
4025970 306.3.1.2 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › Img2 0.64 45.0 4.73e-01 83.0% 81.1%
4030543 310.2.1.1 a+b two layers › RRF/tRNA synthetase additional domain-like › Ribosome recycling factor, RRF › Ribosome recycling factor, RRF › RRF 0.63 44.0 3.58e-01 73.0% 40.0%
4075173 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.63 51.0 4.94e-01 87.0% 78.2%
4028024 306.3.1.2 a+b two layers › Glucose permease domain IIB-like › eIF1-like › eIF1-like › Img2 0.62 44.0 4.57e-01 83.0% 78.5%
4014672 3016.1.1.1 a+b two layers › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › C-terminal domain in some PLP-dependent transferases › Aminotran_1_2 0.62 48.0 4.16e-01 82.0% 88.0%
3988081 306.2.1.1 a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor › Arg_repressor_C 0.61 45.0 4.91e-01 80.0% 98.7%
5030026 242.1.1.7 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 0.61 49.0 5.12e-01 86.0% 97.8%
3599877 304.25.1.0 a+b two layers › Alpha-beta plaits › Bacterial exopeptidase dimerisation domain › Bacterial exopeptidase dimerisation domain 0.60 45.0 3.52e-01 79.0% 66.8%
4938715 306.2.1.0 a+b two layers › Glucose permease domain IIB-like › arginine repressor C terminal domain-related › C-terminal domain of arginine repressor 0.57 43.0 4.58e-01 81.0% 100.0%
4234478 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.54 37.0 3.60e-01 70.0% 80.7%
4422472 5104.1.1.1 a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 0.53 36.0 3.47e-01 71.0% 83.2%
5032313 101.1.2.150 alpha arrays › HTH › HTH › winged helix domain › HTH_45 0.52 43.0 4.19e-01 92.0% 85.5%
3797043 242.1.1.0 a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases 0.52 41.0 4.13e-01 87.0% 98.0%