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OQ221554.1__WCF58817.1__PhiCrAssBcn19_1__00001
Bact-VirOQ221554.1__WCF58817.1__PhiCrAssBcn19_1__00001
Identity
- Accession:
- OQ221554 ↗
- Kingdom:
- phage
Quality
88.6
mean pLDDT
Taxonomy
Heunggongvirae›
Uroviricota›
Caudoviricetes›
Crassvirales›
Steigviridae›
Kehishuvirus›
Bacteroides_phage_PhiCrAssBcn19
TaxID: 3023101
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 5-78
Domain cluster:
rep: SRR1747059_scaffold_20_prodigal-single.1__X__X__00013__D2-78
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF25710.2 best | CrAss_Ring_3_4 | 36.6 | 4.00e-09 | 100.0% | 24.8% |
CATH (20)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1lp8A01 | 3.40.420.10 | Alpha Beta › 3-Layer(aba) Sandwich › Ricin (A subunit); domain 1 › Ricin (A subunit), domain 1 | 0.67 | 47.0 | 3.57e-01 | 74.3% | 59.1% |
| 3m7aA01 | 2.60.120.1140 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF192 | 0.63 | 50.0 | 4.19e-01 | 89.2% | 86.0% |
| 2azeB00 | 6.10.250.540 | Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › | 0.62 | 32.0 | 2.88e-01 | 83.8% | 33.7% |
| 3pjyA00 | 2.60.120.1140 | Mainly Beta › Sandwich › Jelly Rolls › Protein of unknown function DUF192 | 0.62 | 52.0 | 4.34e-01 | 93.2% | 93.8% |
| 6em3x01 | 3.40.50.10480 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Brix domain | 0.58 | 45.0 | 3.50e-01 | 87.8% | 93.5% |
| 7uzsX01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.57 | 50.0 | 4.21e-01 | 100.0% | 91.6% |
| 6j7cA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.56 | 47.0 | 3.66e-01 | 93.2% | 70.5% |
| 4p22A01 | 3.40.50.720 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain | 0.55 | 45.0 | 3.29e-01 | 94.6% | 76.7% |
| 3h4rA00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.54 | 40.0 | 2.97e-01 | 81.1% | 63.5% |
| 6hjfA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.54 | 46.0 | 3.52e-01 | 95.9% | 61.4% |
| 1ndbA01 | 3.30.559.10 | Alpha Beta › 2-Layer Sandwich › Chloramphenicol Acetyltransferase › Chloramphenicol acetyltransferase-like domain | 0.53 | 46.0 | 3.17e-01 | 100.0% | 69.6% |
| 5dynA01 | 3.40.50.11970 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.53 | 38.0 | 3.41e-01 | 75.7% | 84.9% |
| 2ot9A01 | 3.10.640.10 | Alpha Beta › Roll › Restriction endonuclease-like alpha-beta roll fold › Restriction endonuclease-like alpha-beta roll domain | 0.53 | 41.0 | 3.21e-01 | 87.8% | 93.2% |
| 4ms4A02 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.53 | 41.0 | 3.18e-01 | 89.2% | 94.2% |
| 4dunA01 | 3.10.310.10 | Alpha Beta › Roll › Diaminopimelate Epimerase; Chain A, domain 1 › Diaminopimelate Epimerase; Chain A, domain 1 | 0.52 | 42.0 | 3.68e-01 | 94.6% | 66.1% |
| 2dewX03 | 3.75.10.10 | Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A | 0.51 | 45.0 | 2.89e-01 | 100.0% | 88.6% |
| 3ewmA00 | 3.40.1190.20 | Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase | 0.51 | 42.0 | 2.85e-01 | 95.9% | 83.2% |
| 1lvbA01 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.50 | 36.0 | 3.24e-01 | 97.3% | 52.8% |
| 4ic1D00 | 3.90.320.10 | Alpha Beta › Alpha-Beta Complex › Lambda Exonuclease; Chain A › | 0.50 | 37.0 | 2.79e-01 | 81.1% | 47.6% |
| 4jyjB00 | 3.90.226.10 | Alpha Beta › Alpha-Beta Complex › 2-enoyl-CoA Hydratase; Chain A, domain 1 › 2-enoyl-CoA Hydratase; Chain A, domain 1 | 0.50 | 36.0 | 2.58e-01 | 78.4% | 86.2% |
ECOD (42)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4941672 | 3127.1.1.1 ↗ | beta sandwiches › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › DUF192 | 0.66 | 53.0 | 4.44e-01 | 86.5% | 97.6% |
| 5054765 | 3127.1.1.1 ↗ | beta sandwiches › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › DUF192 | 0.66 | 53.0 | 4.50e-01 | 89.2% | 96.8% |
| 4928497 | 3127.1.1.1 ↗ | beta sandwiches › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › DUF192 | 0.65 | 53.0 | 4.49e-01 | 89.2% | 99.2% |
| 5022519 | 3127.1.1.1 ↗ | beta sandwiches › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › DUF192 | 0.65 | 52.0 | 4.48e-01 | 89.2% | 98.3% |
| 5027608 | 3127.1.1.1 ↗ | beta sandwiches › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › DUF192 | 0.64 | 52.0 | 4.46e-01 | 89.2% | 99.2% |
| 408734 | 3127.1.1.1 ↗ | beta sandwiches › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › DUF192 | 0.64 | 54.0 | 4.48e-01 | 93.2% | 94.6% |
| 389280 | 3127.1.1.1 ↗ | beta sandwiches › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › DUF192 | 0.64 | 51.0 | 4.19e-01 | 89.2% | 83.6% |
| 5003675 | 3127.1.1.1 ↗ | beta sandwiches › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › DUF192 | 0.64 | 51.0 | 4.41e-01 | 87.8% | 100.0% |
| 5010842 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.63 | 47.0 | 3.70e-01 | 79.7% | 94.2% |
| 5064765 | 3127.1.1.1 ↗ | beta sandwiches › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › Putative transcription regulator R01717-related › DUF192 | 0.61 | 49.0 | 4.16e-01 | 91.9% | 94.6% |
| 4268481 | 323.1.1.0 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases | 0.59 | 51.0 | 3.87e-01 | 97.3% | 56.8% |
| 3595141 | 2006.1.6.0 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like | 0.58 | 44.0 | 3.19e-01 | 81.1% | 71.2% |
| 4956652 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.57 | 44.0 | 4.07e-01 | 83.8% | 88.2% |
| 3913068 | 2008.2.1.1 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › tRNA-intron endonuclease catalytic domain-like › tRNA-intron endonuclease catalytic domain-like › tRNA_int_endo | 0.57 | 43.0 | 3.87e-01 | 82.4% | 77.1% |
| 4950447 | 2008.1.1.87 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › YhcG_C | 0.56 | 49.0 | 3.89e-01 | 98.6% | 83.8% |
| 3963060 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.56 | 50.0 | 3.59e-01 | 100.0% | 88.4% |
| 4943545 | 4143.1.1.11 ↗ | a+b two layers › THUMP domain-like › THUMP domain-like › THUMP domain-like › UPF0020 | 0.56 | 42.0 | 3.75e-01 | 82.4% | 94.5% |
| 3631697 | 286.1.1.0 ↗ | a+b complex topology › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like › Diaminopimelate epimerase-like | 0.56 | 46.0 | 4.26e-01 | 95.9% | 83.0% |
| 5072012 | 2008.1.1.3 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › Hjc | 0.56 | 43.0 | 4.11e-01 | 85.1% | 87.8% |
| 4880097 | 323.1.1.5 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Condensation | 0.56 | 39.0 | 3.94e-01 | 74.3% | 88.2% |
| 5067578 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.55 | 45.0 | 3.80e-01 | 89.2% | 77.6% |
| 4127806 | 3585.1.1.0 ↗ | a+b two layers › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain › DNA polymerase III C-terminal domain | 0.55 | 40.0 | 3.85e-01 | 77.0% | 100.0% |
| 5019719 | 7518.1.1.6 ↗ | a/b three-layered sandwiches › PK C-terminal domain-like › PK C-terminal domain-like › PK C-terminal domain-like › DacZ_A | 0.55 | 42.0 | 3.60e-01 | 83.8% | 96.0% |
| 4189444 | 2008.1.1.6 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › UPF0102 | 0.55 | 42.0 | 3.58e-01 | 82.4% | 85.8% |
| 1874314 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.54 | 43.0 | 3.45e-01 | 89.2% | 79.2% |
| 4250586 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.54 | 40.0 | 3.53e-01 | 79.7% | 80.0% |
| 3822590 | 2008.1.1.77 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › NOV_C | 0.54 | 41.0 | 3.62e-01 | 82.4% | 87.0% |
| 3412552 | 2007.1.2.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I | 0.54 | 44.0 | 3.35e-01 | 91.9% | 99.5% |
| 3735156 | 323.1.1.3 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding | 0.54 | 46.0 | 3.59e-01 | 98.6% | 69.7% |
| 5031998 | 2008.1.1.0 ↗ | a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like | 0.54 | 40.0 | 3.37e-01 | 81.1% | 82.2% |
| 4029086 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.53 | 45.0 | 2.72e-01 | 100.0% | 86.7% |
| 3509076 | 2003.1.9.1 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF | 0.53 | 44.0 | 2.83e-01 | 93.2% | 91.0% |
| 5076901 | 7502.1.1.0 ↗ | a/b three-layered sandwiches › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS › Anticodon-binding domain of Class II aaRS | 0.53 | 42.0 | 3.53e-01 | 94.6% | 76.7% |
| 4435772 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.52 | 40.0 | 3.52e-01 | 87.8% | 85.4% |
| 4411782 | 5104.1.1.0 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases | 0.52 | 41.0 | 3.68e-01 | 89.2% | 83.6% |
| 4864561 | 2492.1.1.3 ↗ | a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › JAB,PROCT | 0.51 | 41.0 | 3.22e-01 | 91.9% | 74.9% |
| 4889800 | 2003.1.9.4 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › Activating enzymes of the ubiquitin-like proteins › ThiF+UBA_E1_SCCH | 0.51 | 42.0 | 2.60e-01 | 94.6% | 99.6% |
| 3606787 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.51 | 31.0 | 2.78e-01 | 87.8% | 39.1% |
| 5083140 | 2004.1.1.146 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase | 0.51 | 39.0 | 2.96e-01 | 90.5% | 97.8% |
| 4183414 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.51 | 40.0 | 3.49e-01 | 89.2% | 84.2% |
| 4064283 | 5104.1.1.1 ↗ | a+b three layers › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › C-terminal domain in DHH phosphoesterases › DHHA1 | 0.51 | 40.0 | 3.28e-01 | 89.2% | 68.2% |
| 3513072 | 323.1.1.6 ↗ | a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › Carn_acyltransf | 0.50 | 42.0 | 3.15e-01 | 94.6% | 84.1% |